Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g41119 Nelumbo nucifera HOM05D000358 ORTHO05D273634 4.4e-29 130.6 64 100.0
Nn2g14014 Nelumbo nucifera HOM05D000358 ORTHO05D002575 1.1e-08 62.8 34 91.2
Nn6g35033 Nelumbo nucifera HOM05D000358 ORTHO05D002575 4.3e-08 60.8 34 88.2
TAR623G0575 Trochodendron aralioides HOM05D000358 ORTHO05D002575 2.1e-07 58.5 34 85.3
Manes.11G157900 Manihot esculenta HOM05D000358 ORTHO05D002575 1.1e-06 56.2 34 79.4
Haze_23443 Corylus avellana HOM05D000358 ORTHO05D002575 1.4e-06 55.8 32 84.4
Duzib168G1814 Durio zibethinus HOM05D000358 ORTHO05D002575 1.4e-06 55.8 32 84.4
Nn5g29061 Nelumbo nucifera HOM05D000358 ORTHO05D002575 1.4e-06 55.8 34 85.3
Phvul.005G126700 Phaseolus vulgaris HOM05D000358 ORTHO05D002575 1.4e-06 55.8 32 84.4
VMungo1080G1128 Vigna mungo HOM05D000358 ORTHO05D002575 1.4e-06 55.8 32 84.4
COL.COLO4_19305 Corchorus olitorius HOM05D000358 ORTHO05D002575 1.8e-06 55.5 32 84.4
Potri.004G187600 Populus trichocarpa HOM05D000358 ORTHO05D002575 1.8e-06 55.5 34 82.4
Sabra04G0126500 Salix brachista HOM05D000358 ORTHO05D002575 1.8e-06 55.5 34 82.4
Duzib170G0611 Durio zibethinus HOM05D000358 ORTHO05D002575 3.1e-06 54.7 32 81.2
Glyma.13G318700 Glycine max HOM05D000358 ORTHO05D002575 3.1e-06 54.7 32 81.2
Lj3g0006590 Lotus japonicus HOM05D000358 ORTHO05D002575 3.1e-06 54.7 32 81.2
Medtr4g055230 Medicago truncatula HOM05D000358 ORTHO05D002575 4.0e-06 54.3 32 81.2
Phvul.011G090700 Phaseolus vulgaris HOM05D000358 ORTHO05D002575 4.0e-06 54.3 32 78.1
Potri.009G148300 Populus trichocarpa HOM05D000358 ORTHO05D002575 5.2e-06 53.9 34 79.4
QL01p013595 Quercus lobata HOM05D000358 ORTHO05D002575 5.2e-06 53.9 32 78.1
Duzib150G0121 Durio zibethinus HOM05D000358 ORTHO05D002575 6.8e-06 53.5 32 78.1
FAN21G1582 Fragaria x ananassa HOM05D000358 ORTHO05D002575 6.8e-06 53.5 32 78.1
FAN25G1914 Fragaria x ananassa HOM05D000358 ORTHO05D002575 6.8e-06 53.5 32 78.1
FAN25G3044 Fragaria x ananassa HOM05D000358 ORTHO05D002575 6.8e-06 53.5 32 78.1
Prupe.6G120000 Prunus persica HOM05D000358 ORTHO05D002575 6.8e-06 53.5 32 78.1
RcHm_v2.0_Chr5g0043291 Rosa chinensis HOM05D000358 ORTHO05D002575 6.8e-06 53.5 32 78.1
CiPaw.13G140500 Carya illinoinensis HOM05D000358 ORTHO05D002575 8.9e-06 53.1 32 78.1
Cc01_g09750 Coffea canephora HOM05D000358 ORTHO05D002575 8.9e-06 53.1 34 73.5
Thecc.09G290800 Theobroma cacao HOM05D000358 ORTHO05D002575 8.9e-06 53.1 32 81.2


User provided reference genes

Program Settings