Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40878 Nelumbo nucifera HOM05D000971 ORTHO05D000901 1.3e-81 306.2 148 100.0
Nn5g30761 Nelumbo nucifera HOM05D000971 ORTHO05D000901 5.7e-48 194.5 127 77.2
TAR376G0024 Trochodendron aralioides HOM05D000971 ORTHO05D000901 2.3e-28 129.4 122 58.2
Manes.02G105900 Manihot esculenta HOM05D000971 ORTHO05D000901 2.8e-26 122.5 125 52.8
TAR628G1426 Trochodendron aralioides HOM05D000971 ORTHO05D000901 1.5e-24 116.7 123 54.5
Manes.01G147400 Manihot esculenta HOM05D000971 ORTHO05D000901 2.6e-24 115.9 126 53.2
Dinv40112 Davidia involucrata HOM05D000971 ORTHO05D000901 4.4e-24 115.2 128 52.3
Duzib147G0877 Durio zibethinus HOM05D000971 ORTHO05D000901 1.3e-23 113.6 133 50.4
Cc07_g11010 Coffea canephora HOM05D000971 ORTHO05D000901 2.9e-23 112.5 125 48.8
Potri.005G112100 Populus trichocarpa HOM05D000971 ORTHO05D000901 2.9e-23 112.5 128 50.0
Peaxi162Scf00328g00620 Petunia axillaris HOM05D000971 ORTHO05D000901 6.4e-23 111.3 123 50.4
Potri.007G056500 Populus trichocarpa HOM05D000971 ORTHO05D000901 6.4e-23 111.3 133 51.1
Thecc.01G015200 Theobroma cacao HOM05D000971 ORTHO05D000901 6.4e-23 111.3 129 48.8
Sabra07G0048300 Salix brachista HOM05D000971 ORTHO05D000901 3.2e-22 109.0 127 49.6
COL.COLO4_22456 Corchorus olitorius HOM05D000971 ORTHO05D000901 5.4e-22 108.2 133 48.1
Aqoxy6G02194 Aquilegia oxysepala HOM05D000971 ORTHO05D000901 9.2e-22 107.5 122 50.8
Gorai.007G192700 Gossypium raimondii HOM05D000971 ORTHO05D000901 9.2e-22 107.5 130 50.8
Gohir.A11G173800 Gossypium hirsutum HOM05D000971 ORTHO05D000901 1.6e-21 106.7 130 50.0
Gohir.D11G180800 Gossypium hirsutum HOM05D000971 ORTHO05D000901 2.1e-21 106.3 130 49.2
Gorai.007G192600 Gossypium raimondii HOM05D000971 ORTHO05D000901 2.1e-21 106.3 130 49.2
Nitab4.5_0003187g0080 Nicotiana tabacum HOM05D000971 ORTHO05D000901 2.7e-21 105.9 131 46.6
Gohir.A11G173700 Gossypium hirsutum HOM05D000971 ORTHO05D000901 4.6e-21 105.1 130 49.2
Nitab4.5_0001892g0040 Nicotiana tabacum HOM05D000971 ORTHO05D000901 6.0e-21 104.8 131 46.6
CiPaw.07G060700 Carya illinoinensis HOM05D000971 ORTHO05D000901 7.8e-21 104.4 130 47.7
CsaV3_6G047310 Cucumis sativus L. HOM05D000971 ORTHO05D000901 7.8e-21 104.4 134 43.3
Sed0015718 Sechium edule HOM05D000971 ORTHO05D000901 7.8e-21 104.4 137 45.3
Sabra05G0091900 Salix brachista HOM05D000971 ORTHO05D000901 1.0e-20 104.0 133 47.4
MELO3C007922.2 Cucumis melo HOM05D000971 ORTHO05D000901 1.3e-20 103.6 134 43.3
Dinv33651 Davidia involucrata HOM05D000971 ORTHO05D000901 1.3e-20 103.6 121 50.4
Duzib264G0774 Durio zibethinus HOM05D000971 ORTHO05D000901 1.3e-20 103.6 132 48.5
PSO675G6524 Papaver somniferum HOM05D000971 ORTHO05D000901 1.3e-20 103.6 123 49.6
Rhsim10G0209500 Rhododendron simsii HOM05D000971 ORTHO05D000901 1.3e-20 103.6 129 46.5
TWI53G0653 Tripterygium wilfordii HOM05D000971 ORTHO05D000901 1.3e-20 103.6 140 45.0
vmacro22148 Vaccinium macrocarpon HOM05D000971 ORTHO05D000901 1.3e-20 103.6 130 46.9
DCAR_011602 Daucus carota HOM05D000971 ORTHO05D000901 1.7e-20 103.2 121 48.8
ClCG01G020430 Citrullus lanatus HOM05D000971 ORTHO05D000901 3.0e-20 102.4 133 46.6
Gohir.D11G180900 Gossypium hirsutum HOM05D000971 ORTHO05D000901 3.0e-20 102.4 130 49.2
QL06p051036 Quercus lobata HOM05D000971 ORTHO05D000901 3.9e-20 102.1 133 48.1
Ciclev10025357m.g Citrus clementina HOM05D000971 ORTHO05D000901 5.1e-20 101.7 169 41.4
Phvul.003G264900 Phaseolus vulgaris HOM05D000971 ORTHO05D000901 5.1e-20 101.7 129 45.7
Solyc02g083640.4 Solanum lycopersicum HOM05D000971 ORTHO05D000901 5.1e-20 101.7 127 51.2
Sopen02g028420 Solanum pennellii HOM05D000096 ORTHO05D000901 6.6e-20 101.3 127 51.2
VMungo0251G1809 Vigna mungo HOM05D000971 ORTHO05D000901 6.6e-20 101.3 132 43.9
PGR102G0073 Punica granatum HOM05D000971 ORTHO05D000901 8.6e-20 100.9 129 48.8
Sed0013645 Sechium edule HOM05D000971 ORTHO05D000901 8.6e-20 100.9 137 46.0
PGSC0003DMG400003580 Solanum tuberosum HOM05D000971 ORTHO05D000901 8.6e-20 100.9 132 49.2
Lj2A480T47 Lonicera japonica HOM05D000971 ORTHO05D000901 1.1e-19 100.5 129 51.2
PSO541G4624 Papaver somniferum HOM05D000971 ORTHO05D000901 1.1e-19 100.5 123 50.4
CAN.G1274.25 Capsicum annuum HOM05D000971 ORTHO05D000901 4.3e-19 98.6 125 49.6
CANSAT25G3482 Cannabis sativa HOM05D000971 ORTHO05D000901 5.6e-19 98.2 127 45.7
TWI73G1250 Tripterygium wilfordii HOM05D000971 ORTHO05D000901 5.6e-19 98.2 126 48.4
CiPaw.08G130100 Carya illinoinensis HOM05D000971 ORTHO05D000901 9.5e-19 97.4 131 44.3
MBI09_g35942_MAGBIO Magnolia biondii HOM05D000971 ORTHO05D000901 1.2e-18 97.1 129 45.0
Cpa.g.sc6.281 Carica papaya HOM05D000971 ORTHO05D000901 1.6e-18 96.7 138 42.8
Hund14059 Selenicereus undatus HOM05D000971 ORTHO05D000901 1.6e-18 96.7 131 48.9
GSVIVG01018742001 Vitis vinifera HOM05D000971 ORTHO05D000901 3.6e-18 95.5 127 48.8
Glyma.16G124700 Glycine max HOM05D000971 ORTHO05D000901 4.7e-18 95.1 130 41.5
Hma1.2p1_0869F.1_g230730 Hydrangea macrophylla HOM05D000971 ORTHO05D000901 4.7e-18 95.1 120 45.8
Prupe.7G171000 Prunus persica HOM05D000971 ORTHO05D000901 4.7e-18 95.1 133 43.6
Eucgr.J02462 Eucalyptus grandis HOM05D000971 ORTHO05D000901 1.1e-17 94.0 130 47.7
TPR.G19496 Trifolium pratense HOM05D000971 ORTHO05D000901 1.1e-17 94.0 131 43.5
Atru.chr3.849 Acer truncatum HOM05D000971 ORTHO05D000901 1.4e-17 93.6 193 35.2
Oeu036569.1 Olea europaea HOM05D000971 ORTHO05D000901 1.4e-17 93.6 127 48.8
MSTRG.2725 Avicennia marina HOM05D000971 ORTHO05D000901 1.8e-17 93.2 126 46.0
Glyma.02G046200 Glycine max HOM05D000971 ORTHO05D000901 1.8e-17 93.2 131 40.5
Oeu014560.1 Olea europaea HOM05D000971 ORTHO05D000901 1.8e-17 93.2 122 49.2
GSVIVG01018744001 Vitis vinifera HOM05D000971 ORTHO05D000901 4.0e-17 92.0 127 48.0
Ah.03g149060 Amaranthus hybridus HOM05D000971 ORTHO05D000901 8.9e-17 90.9 123 47.2
MD15G1243100 Malus domestica HOM05D000971 ORTHO05D000901 1.2e-16 90.5 128 42.2
Lj4g0022115 Lotus japonicus HOM05D000971 ORTHO05D000901 2.6e-16 89.4 119 44.5
Lalb_Chr16g0391371 Lupinus albus HOM05D000971 ORTHO05D000901 3.4e-16 89.0 141 34.8
Nitab4.5_0004340g0010 Nicotiana tabacum HOM05D000971 ORTHO05D000901 7.5e-16 87.8 119 46.2
Cfa006996 Carpinus fangiana HOM05D000971 ORTHO05D000901 9.9e-16 87.4 129 41.9
Ca_03625_v3 Cicer arietinum L. HOM05D000971 ORTHO05D000901 2.2e-15 86.3 125 41.6
Haze_03736 Corylus avellana HOM05D000971 ORTHO05D000901 2.2e-15 86.3 129 41.9
Nitab4.5_0000438g0190 Nicotiana tabacum HOM05D000971 ORTHO05D000901 6.4e-15 84.7 121 43.8
Psat4g101920 Pisum sativum HOM05D000971 ORTHO05D000901 6.4e-15 84.7 122 42.6
Medtr8g075260 Medicago truncatula HOM05D000971 ORTHO05D000901 5.4e-14 81.6 124 41.9
arahy.Tifrunner.gnm1.ann1.LB653W Arachis hypogaea HOM05D000971 ORTHO05D000901 7.1e-14 81.3 130 43.8
arahy.Tifrunner.gnm1.ann1.LNY1ZH Arachis hypogaea HOM05D000971 ORTHO05D000901 7.1e-14 81.3 130 43.8
MD02G1127900 Malus domestica HOM05D000971 ORTHO05D000901 7.1e-14 81.3 129 38.0
Sc16g0002010 Simmondsia chinensis HOM05D000971 ORTHO05D000901 1.6e-13 80.1 165 36.4
ECA246G4778 Erigeron canadensis HOM05D000971 ORTHO05D000901 4.6e-13 78.6 121 42.1
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.1e-11 73.9 126 39.7
RcHm_v2.0_Chr2g0099121 Rosa chinensis HOM05D000971 ORTHO05D000901 1.9e-11 73.2 128 40.6
AUR62029489 Chenopodium quinoa HOM05D000971 ORTHO05D000901 1.2e-10 70.5 125 40.8
SHI08531 Sapria himalayana HOM05D000971 ORTHO05D000901 1.6e-10 70.1 121 38.0
SGA_v2.0_scaffold5G02795 Striga asiatica HOM05D000971 ORTHO05D000901 1.6e-10 70.1 121 40.5
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.1e-10 69.7 126 38.9
AUR62003347 Chenopodium quinoa HOM05D000971 ORTHO05D000901 2.8e-10 69.3 125 39.2
CARHR281610 Cardamine hirsuta HOM05D000971 ORTHO05D000901 3.6e-10 68.9 143 37.8
FvH4_1g11500 Fragaria vesca HOM05D000971 ORTHO05D000901 3.6e-10 68.9 126 38.9
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.6e-10 68.9 126 38.9
FAN26G3068 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.6e-10 68.9 126 38.9
unitig_899.g14719 Utricularia gibba HOM05D000971 ORTHO05D000901 1.4e-09 67.0 123 38.2
BcaC06g33041 Brassica carinata HOM05D000971 ORTHO05D000901 3.1e-09 65.9 121 38.8
CSS0036080 Camellia sinensis var. sinensis HOM05D000971 ORTHO05D000901 3.1e-09 65.9 60 53.3
BcaB01g00535 Brassica carinata HOM05D000971 ORTHO05D000901 4.0e-09 65.5 123 38.2
HanXRQChr16g0531531 Helianthus annuus HOM05D000971 ORTHO05D000901 6.8e-09 64.7 123 35.0
PSO170G5248 Papaver somniferum HOM05D000971 ORTHO05D000901 6.8e-09 64.7 70 51.4
PSO700G0286 Papaver somniferum HOM05D000971 ORTHO05D000901 8.9e-09 64.3 70 50.0
Thhalv10010403m.g Eutrema salsugineum HOM05D000971 ORTHO05D000901 1.2e-08 63.9 122 38.5
BolC3t18979H Brassica oleracea HOM05D000971 ORTHO05D015474 3.4e-08 62.4 123 35.8
Sp5g10940 Schrenkiella parvula HOM05D000971 ORTHO05D000901 3.4e-08 62.4 119 38.7
C09p36240 Brassica napus HOM05D000971 ORTHO05D000901 7.6e-08 61.2 123 35.0
Actinidia36754 Actinidia chinensis HOM05D000971 ORTHO05D000901 9.9e-08 60.8 64 56.2
AL5G31700 Arabidopsis lyrata HOM05D000971 ORTHO05D000901 9.9e-08 60.8 122 40.2
EL10Ac6g15496 Beta vulgaris HOM05D000971 ORTHO05D000901 9.9e-08 60.8 102 42.2
C07p46270 Brassica napus HOM05D000971 ORTHO05D000901 1.3e-07 60.5 119 34.5
Carub.0005s1765 Capsella rubella HOM05D000971 ORTHO05D000901 1.7e-07 60.1 122 33.6
CARHR160860 Cardamine hirsuta HOM05D000971 ORTHO05D000901 2.9e-07 59.3 118 38.1
C04p15260 Brassica napus HOM05D000971 ORTHO05D015474 3.8e-07 58.9 123 35.0
BolC4t23097H Brassica oleracea HOM05D000971 ORTHO05D000901 3.8e-07 58.9 123 35.0
AT3G51280 Arabidopsis thaliana HOM05D000971 ORTHO05D000901 6.4e-07 58.2 117 39.3
BcaC02g11459 Brassica carinata HOM05D000971 ORTHO05D000901 6.4e-07 58.2 119 36.1
C03p67050 Brassica napus HOM05D000971 ORTHO05D015474 6.4e-07 58.2 123 34.1
Lsat_1_v5_gn_3_72560 Lactuca sativa HOM05D000971 ORTHO05D000901 6.4e-07 58.2 58 48.3
DCAR_010142 Daucus carota HOM05D000971 ORTHO05D000901 3.2e-06 55.8 68 38.2
Migut.H02176 Erythranthe guttata HOM05D000971 ORTHO05D000901 5.4e-06 55.1 128 32.8
BcaC09g50091 Brassica carinata HOM05D000971 ORTHO05D000901 9.2e-06 54.3 145 31.0
C01p29200 Brassica napus HOM05D000971 ORTHO05D000901 9.2e-06 54.3 145 31.0
BolC1t02849H Brassica oleracea HOM05D000971 ORTHO05D000901 9.2e-06 54.3 145 31.0


User provided reference genes

Program Settings