Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 3.4e-84 315.1 171 100.0
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.4e-44 182.2 174 59.2
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 4.4e-44 181.8 174 59.2
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 6.0e-41 171.4 107 88.8
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 2.5e-39 166.0 139 68.3
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 1.5e-36 156.8 170 57.6
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 2.6e-36 156.0 173 56.6
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 2.9e-35 152.5 172 55.2
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 7.8e-33 144.4 175 52.6
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 7.8e-33 144.4 175 52.6
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 7.8e-33 144.4 175 52.6
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 8.7e-32 141.0 169 52.1
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 1.5e-31 140.2 148 56.1
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 2.5e-31 139.4 175 52.6
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 5.6e-31 138.3 148 55.4
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 1.6e-30 136.7 178 52.2
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 8.1e-30 134.4 170 52.4
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 8.1e-30 134.4 194 49.0
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.1e-29 134.0 172 51.7
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.4e-29 133.7 172 50.6
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.8e-29 133.3 168 54.2
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 2.4e-29 132.9 170 50.6
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 4.0e-29 132.1 173 50.9
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 4.0e-29 132.1 162 53.7
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 5.3e-29 131.7 163 48.5
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 9.0e-29 131.0 168 50.0
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.6e-28 129.4 168 54.8
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 5.8e-28 128.3 145 54.5
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 7.6e-28 127.9 162 50.6
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 9.9e-28 127.5 176 50.6
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 1.3e-27 127.1 164 54.9
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 2.2e-27 126.3 168 47.0
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 2.9e-27 125.9 141 56.0
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.8e-27 125.6 168 47.6
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 4.9e-27 125.2 168 52.4
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 8.4e-27 124.4 178 47.8
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.1e-26 124.0 142 55.6
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.1e-26 124.0 134 56.0
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 2.4e-26 122.9 170 48.8
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 4.2e-26 122.1 171 45.6
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 4.2e-26 122.1 171 45.6
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 9.3e-26 120.9 161 52.2
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 2.1e-25 119.8 162 50.6
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 2.3e-24 116.3 177 46.3
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.0e-24 115.9 124 56.5
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 5.1e-24 115.2 176 47.7
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 6.7e-24 114.8 131 55.7
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 6.7e-24 114.8 109 57.8
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.5e-23 113.6 134 52.2
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.5e-23 113.6 177 46.9
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 1.9e-23 113.2 166 49.4
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 2.5e-23 112.8 141 51.8
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 3.3e-23 112.5 125 53.6
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 3.3e-23 112.5 125 53.6
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 3.3e-23 112.5 166 47.0
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 9.6e-23 110.9 118 52.5
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 2.1e-22 109.8 116 53.4
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 3.7e-22 109.0 119 53.8
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 4.8e-22 108.6 184 45.7
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 4.8e-22 108.6 178 46.6
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 4.8e-22 108.6 91 69.2
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 4.8e-22 108.6 91 69.2
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 6.2e-22 108.2 173 49.1
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 6.2e-22 108.2 178 47.2
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 8.1e-22 107.8 114 57.9
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 1.1e-21 107.5 94 66.0
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 3.1e-21 105.9 144 51.4
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 5.3e-21 105.1 181 48.6
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 9.0e-21 104.4 91 68.1
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.2e-20 104.0 96 63.5
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.6e-20 102.8 127 52.8
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 4.5e-20 102.1 203 42.9
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 1.0e-19 100.9 163 44.8
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 1.7e-19 100.1 167 41.3
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 2.9e-19 99.4 170 44.1
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 4.9e-19 98.6 176 40.9
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 6.5e-19 98.2 80 66.2
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 6.5e-19 98.2 114 49.1
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 8.4e-19 97.8 112 54.5
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.1e-18 97.4 148 43.2
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.1e-18 97.4 148 43.2
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.1e-18 97.4 170 41.8
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 2.5e-18 96.3 74 67.6
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 4.2e-18 95.5 80 63.8
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 7.1e-18 94.7 170 40.0
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 2.7e-17 92.8 92 59.8
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 3.5e-17 92.4 118 50.0
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 7.9e-17 91.3 177 41.2
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 2.3e-16 89.7 174 37.4
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.0e-16 89.4 105 53.3
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 5.1e-16 88.6 191 40.3
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.1e-15 87.4 126 50.8
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 2.5e-15 86.3 168 39.3
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 9.6e-15 84.3 168 41.7
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.6e-14 83.6 146 47.3
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 2.4e-13 79.7 170 40.0
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 2.4e-13 79.7 92 50.0
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.2e-12 77.4 144 36.8
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 3.8e-11 72.4 74 56.8
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 1.1e-10 70.9 76 53.9
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 9.3e-10 67.8 119 45.4
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 1.0e-08 64.3 127 40.2
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 3.9e-08 62.4 65 50.8
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 3.9e-08 62.4 65 50.8
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 3.9e-08 62.4 65 50.8
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 3.3e-07 59.3 104 35.6
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 9.7e-07 57.8 180 32.8
Potri.009G034951 Populus trichocarpa HOM05D007264 ORTHO05D008639 4.8e-06 55.5 63 54.0


User provided reference genes

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