Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 0.0e+00 1075.5 600 100.0
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 1.6e-85 321.2 627 42.6
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 9.3e-81 305.4 587 44.0
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 3.8e-74 283.5 541 40.1
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 4.8e-61 240.0 611 36.3
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.2e-59 235.3 594 37.4
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.2e-58 231.1 512 39.6
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 7.2e-57 226.1 579 37.7
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 1.3e-53 215.3 586 34.3
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 2.2e-53 214.5 558 34.1
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 3.7e-53 213.8 588 34.7
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 1.1e-52 212.2 601 34.4
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 4.1e-52 210.3 244 54.5
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 7.0e-52 209.5 588 34.9
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 2.6e-51 207.6 592 32.9
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.3e-50 205.3 592 34.8
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 1.1e-49 202.2 590 32.2
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 1.1e-49 202.2 618 33.7
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 5.5e-49 199.9 306 47.1
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 2.1e-48 198.0 597 32.2
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 4.7e-48 196.8 572 35.3
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 1.0e-47 195.7 315 44.1
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 4.0e-47 193.7 610 32.8
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 2.0e-46 191.4 271 47.6
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 2.6e-46 191.0 601 32.3
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.3e-45 188.7 587 34.6
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 4.8e-45 186.8 586 33.3
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 4.8e-45 186.8 584 33.0
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 6.3e-45 186.4 601 32.9
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 1.8e-44 184.9 596 30.5
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.2e-43 182.2 588 31.8
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 3.5e-43 180.6 544 34.9
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 1.7e-42 178.3 544 36.8
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.5e-41 174.5 596 33.1
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 4.2e-41 173.7 589 31.2
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 9.4e-41 172.6 589 31.1
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.2e-40 172.2 163 58.9
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.2e-40 172.2 541 31.4
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 1.2e-40 172.2 589 30.9
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 1.6e-40 171.8 545 32.3
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 2.1e-40 171.4 627 30.1
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 2.7e-40 171.0 328 37.2
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 3.6e-40 170.6 608 31.7
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 1.4e-39 168.7 600 35.2
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 3.0e-39 167.5 326 37.7
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 3.0e-39 167.5 604 32.1
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 4.0e-39 167.2 148 64.2
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 6.8e-39 166.4 355 36.6
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 8.8e-39 166.0 590 30.3
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 2.0e-38 164.9 590 31.4
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 2.6e-38 164.5 307 40.4
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 2.6e-38 164.5 167 59.3
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.4e-38 163.7 323 41.5
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 5.7e-38 163.3 317 38.2
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 5.7e-38 163.3 167 55.7
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 7.5e-38 162.9 327 41.3
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.3e-37 162.2 591 30.6
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 2.2e-37 161.4 540 31.5
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.9e-37 160.2 327 41.0
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 1.1e-36 159.1 366 39.3
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 1.4e-36 158.7 602 30.7
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 3.1e-36 157.5 97 77.3
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 4.1e-36 157.1 111 70.3
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.2e-35 155.6 139 63.3
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.2e-35 155.6 131 64.9
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.6e-35 155.2 309 41.4
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 2.7e-35 154.5 591 30.6
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 5.9e-35 153.3 86 82.6
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.3e-34 152.1 534 32.0
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 1.7e-34 151.8 591 29.8
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 1.7e-34 151.8 90 78.9
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 2.3e-34 151.4 587 30.2
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 3.8e-34 150.6 111 71.2
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 8.6e-34 149.4 589 29.0
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.1e-33 149.1 213 49.3
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 2.5e-33 147.9 111 72.1
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 3.3e-33 147.5 106 69.8
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 5.5e-33 146.7 353 38.0
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 1.2e-32 145.6 588 34.0
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 6.1e-32 143.3 139 59.0
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 8.0e-32 142.9 352 37.2
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 8.0e-32 142.9 110 66.4
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 1.0e-31 142.5 111 69.4
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 1.0e-31 142.5 111 69.4
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 1.0e-31 142.5 111 69.4
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.4e-31 142.1 629 29.3
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 1.8e-31 141.7 113 67.3
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 2.3e-31 141.4 585 28.7
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 3.0e-31 141.0 556 30.8
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 4.0e-31 140.6 543 30.9
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 1.2e-30 139.0 111 67.6
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 1.2e-30 139.0 590 30.0
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.5e-30 138.7 310 39.7
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 2.0e-30 138.3 129 61.2
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.0e-30 138.3 124 62.9
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 2.0e-30 138.3 129 61.2
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.0e-30 138.3 558 31.2
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 2.6e-30 137.9 112 69.6
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 3.4e-30 137.5 111 66.7
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 3.4e-30 137.5 111 66.7
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 3.4e-30 137.5 111 66.7
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 3.4e-30 137.5 567 28.4
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 9.8e-30 136.0 590 30.5
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 3.7e-29 134.0 425 32.0
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 4.9e-29 133.7 590 28.6
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 1.1e-28 132.5 215 45.6
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 2.4e-28 131.3 105 66.7
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 2.4e-28 131.3 105 66.7
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 2.4e-28 131.3 139 54.0
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 7.3e-25 119.8 346 32.1
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 9.5e-25 119.4 157 43.9
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 2.8e-24 117.9 537 30.7
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 4.7e-24 117.1 515 31.7
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 6.1e-24 116.7 87 63.2
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 8.0e-24 116.3 103 64.1
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.5e-22 112.1 681 27.3
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 5.8e-22 110.2 95 63.2
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 7.5e-22 109.8 584 27.6
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 4.9e-21 107.1 293 32.1
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.9e-21 107.1 89 62.9
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 4.1e-20 104.0 266 34.2
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 7.0e-20 103.2 104 60.6
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 7.0e-20 103.2 77 63.6
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 4.6e-19 100.5 64 76.6
MBI14_g15781_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.8e-16 91.3 206 34.5
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 8.3e-13 79.7 96 58.3
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 9.2e-12 76.3 238 33.6
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 3.0e-10 71.2 52 65.4
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 9.5e-09 66.2 82 53.7
Cpa.g.c33129.1 Carica papaya HOM05D005890 ORTHO05D006717 1.6e-08 65.5 109 42.2
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 1.8e-07 62.0 272 31.6
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 5.2e-07 60.5 33 78.8
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 5.2e-07 60.5 33 78.8
DCAR_001127 Daucus carota HOM05D000703 ORTHO05D006717 2.6e-06 58.2 74 45.9
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 3.4e-06 57.8 533 25.0


User provided reference genes

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