Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 7.0e-95 350.5 166 100.0
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 4.6e-38 161.8 174 52.3
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 1.8e-37 159.8 174 49.4
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 3.0e-37 159.1 176 51.7
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 3.0e-37 159.1 176 51.7
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 6.7e-37 157.9 173 52.0
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 1.9e-36 156.4 174 48.9
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 2.5e-36 156.0 174 50.0
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 2.5e-36 156.0 175 50.3
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 3.3e-36 155.6 177 48.6
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 3.3e-36 155.6 177 48.6
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 4.3e-36 155.2 173 50.9
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 4.3e-36 155.2 173 50.3
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 5.6e-36 154.8 174 51.7
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 9.6e-36 154.1 174 50.0
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 1.3e-35 153.7 173 50.9
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 1.6e-35 153.3 174 48.3
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 2.1e-35 152.9 174 50.6
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 3.7e-35 152.1 174 49.4
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.7e-35 152.1 174 49.4
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.7e-35 152.1 174 49.4
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 6.2e-35 151.4 140 57.1
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 6.2e-35 151.4 175 49.1
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 6.2e-35 151.4 173 48.0
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 8.1e-35 151.0 171 51.5
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 8.1e-35 151.0 174 50.0
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 8.1e-35 151.0 174 48.3
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 1.1e-34 150.6 174 48.9
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 1.4e-34 150.2 164 51.2
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 1.4e-34 150.2 174 47.1
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 1.8e-34 149.8 173 48.6
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 1.8e-34 149.8 173 48.6
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 1.8e-34 149.8 174 48.9
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.1e-34 149.1 174 48.9
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 3.1e-34 149.1 173 48.0
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 4.0e-34 148.7 171 47.4
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 5.3e-34 148.3 174 49.4
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 6.9e-34 147.9 174 49.4
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 6.9e-34 147.9 173 49.1
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 9.0e-34 147.5 174 47.7
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 1.2e-33 147.1 173 48.6
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 1.5e-33 146.7 174 48.9
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 2.0e-33 146.4 174 47.1
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 2.6e-33 146.0 174 48.9
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 2.6e-33 146.0 174 49.4
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 3.4e-33 145.6 175 46.9
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 3.4e-33 145.6 171 48.0
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 4.5e-33 145.2 171 47.4
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 7.6e-33 144.4 175 48.6
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 7.6e-33 144.4 174 48.3
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 1.0e-32 144.1 174 47.7
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 1.3e-32 143.7 174 47.1
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 1.3e-32 143.7 174 47.7
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 1.3e-32 143.7 170 50.0
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 1.7e-32 143.3 174 47.7
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 1.7e-32 143.3 172 46.5
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 1.7e-32 143.3 172 45.9
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 1.7e-32 143.3 172 45.9
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 2.2e-32 142.9 171 45.6
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 2.2e-32 142.9 173 48.6
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 2.2e-32 142.9 174 46.0
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 6.5e-32 141.4 174 47.7
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 8.4e-32 141.0 171 45.6
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.1e-31 140.6 173 46.8
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 1.1e-31 140.6 171 46.2
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 1.1e-31 140.6 174 46.6
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 1.4e-31 140.2 173 47.4
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.4e-31 140.2 174 47.7
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.9e-31 139.8 173 46.8
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 3.2e-31 139.0 203 42.4
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 5.5e-31 138.3 174 46.0
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 5.5e-31 138.3 174 46.0
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 5.5e-31 138.3 174 46.0
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 5.5e-31 138.3 174 46.6
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 1.2e-30 137.1 173 45.1
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.2e-30 137.1 167 46.1
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 1.2e-30 137.1 165 46.1
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 1.2e-30 137.1 174 45.4
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 1.6e-30 136.7 171 45.0
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 1.6e-30 136.7 173 45.7
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 2.1e-30 136.3 174 45.4
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 2.1e-30 136.3 174 44.8
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 2.1e-30 136.3 174 45.4
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 2.1e-30 136.3 174 44.8
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 4.6e-30 135.2 174 43.1
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 4.6e-30 135.2 180 42.8
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 4.6e-30 135.2 180 42.8
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 6.0e-30 134.8 174 44.3
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 1.0e-29 134.0 173 43.9
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 1.3e-29 133.7 174 43.1
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 2.3e-29 132.9 167 44.3
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 2.3e-29 132.9 173 43.9
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 3.0e-29 132.5 174 42.5
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 3.9e-29 132.1 174 42.0
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 3.9e-29 132.1 174 42.0
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 5.1e-29 131.7 172 43.0
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 5.1e-29 131.7 172 43.0
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 5.1e-29 131.7 172 43.0
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 1.1e-28 130.6 173 42.2
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 1.1e-28 130.6 172 43.0
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 1.1e-28 130.6 175 42.9
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 1.9e-28 129.8 174 43.7
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 2.5e-28 129.4 173 42.8
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 2.5e-28 129.4 173 41.6
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 2.5e-28 129.4 200 40.5
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 5.7e-28 128.3 174 42.0
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 9.6e-28 127.5 174 40.8
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 1.6e-27 126.7 173 41.0
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 1.6e-27 126.7 174 42.5
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 2.1e-27 126.3 174 40.2
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 2.8e-27 125.9 172 43.0
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 2.8e-27 125.9 172 43.0
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 4.8e-27 125.2 174 40.2
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 6.2e-27 124.8 174 40.2
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 1.8e-26 123.2 164 46.3
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 3.1e-26 122.5 174 39.1
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 5.8e-25 118.2 107 56.1
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 1.0e-24 117.5 106 62.3
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 1.4e-23 113.6 159 40.3
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 4.2e-23 112.1 106 58.5
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 1.6e-22 110.2 106 57.5
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 6.1e-22 108.2 177 39.5
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 2.3e-21 106.3 106 55.7
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 5.1e-21 105.1 171 38.0
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 6.7e-21 104.8 104 50.0
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 6.7e-21 104.8 104 50.0
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 8.7e-21 104.4 162 37.7
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 2.5e-20 102.8 165 37.0
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 4.3e-20 102.1 201 34.3
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 9.7e-20 100.9 125 49.6
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 1.3e-19 100.5 158 38.6
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 8.2e-19 97.8 129 42.6
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 1.1e-18 97.4 106 50.0
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 1.3e-16 90.5 179 31.8
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 3.8e-16 89.0 114 46.5
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.9e-15 86.7 128 40.6
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 7.2e-15 84.7 93 52.7
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.6e-09 66.2 38 68.4
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 1.7e-08 63.5 67 38.8
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 5.0e-08 62.0 65 50.8
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 1.9e-07 60.1 38 60.5
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 9.4e-07 57.8 30 70.0
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 2.1e-06 56.6 67 34.3


User provided reference genes

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