Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 3.3e-113 411.8 213 100.0
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 2.1e-107 392.5 211 96.7
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 1.8e-58 229.9 199 60.3
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 2.8e-56 222.6 190 59.5
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 9.1e-55 217.6 193 58.5
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 2.0e-54 216.5 202 58.4
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 2.6e-54 216.1 194 61.3
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 7.7e-54 214.5 208 58.7
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 2.7e-51 206.1 215 48.4
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.4e-50 203.8 206 52.4
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 2.0e-49 199.9 195 55.4
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.4e-47 193.7 141 70.9
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 5.9e-46 188.3 199 52.8
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 3.8e-45 185.7 139 65.5
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 2.5e-44 183.0 186 51.1
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 3.6e-43 179.1 200 47.0
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 1.0e-42 177.6 143 58.0
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 2.3e-42 176.4 213 50.7
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 3.0e-42 176.0 225 48.0
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 6.8e-42 174.9 175 50.3
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 2.0e-41 173.3 149 53.0
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.0e-41 173.3 200 49.0
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 5.7e-41 171.8 148 57.4
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 5.7e-41 171.8 191 48.7
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 7.5e-41 171.4 149 54.4
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 9.8e-41 171.0 193 46.6
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.3e-40 170.6 195 49.7
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.3e-40 170.6 148 54.1
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 4.8e-40 168.7 201 51.7
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 8.3e-40 167.9 219 42.9
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 2.4e-39 166.4 163 48.5
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 3.1e-39 166.0 169 55.6
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 4.1e-39 165.6 193 49.2
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 4.1e-39 165.6 192 46.4
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 4.1e-39 165.6 204 45.6
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 1.2e-38 164.1 206 42.2
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 2.0e-38 163.3 200 44.0
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 2.0e-38 163.3 206 50.5
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 4.5e-38 162.2 151 52.3
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 4.5e-38 162.2 161 56.5
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 1.0e-37 161.0 200 43.5
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 1.7e-37 160.2 198 42.4
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 2.9e-37 159.5 195 51.8
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 5.0e-37 158.7 204 46.6
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 6.5e-37 158.3 148 55.4
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 8.5e-37 157.9 153 56.2
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 8.5e-37 157.9 203 47.8
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 8.5e-37 157.9 147 57.8
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 1.9e-36 156.8 203 47.3
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 1.9e-36 156.8 152 58.6
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 3.2e-36 156.0 148 56.1
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 3.2e-36 156.0 198 44.9
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 7.2e-36 154.8 192 49.5
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 1.2e-35 154.1 200 46.5
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 2.7e-35 152.9 207 47.3
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 3.6e-35 152.5 194 41.2
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 6.1e-35 151.8 218 45.9
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 8.0e-35 151.4 201 46.3
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 1.0e-34 151.0 179 46.4
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.0e-34 151.0 196 42.9
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 1.4e-34 150.6 205 42.4
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 3.0e-34 149.4 210 46.2
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 4.0e-34 149.1 142 57.7
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 5.2e-34 148.7 147 53.7
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 5.2e-34 148.7 147 53.7
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 5.2e-34 148.7 147 53.7
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 5.2e-34 148.7 162 53.1
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 6.8e-34 148.3 153 51.0
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 8.8e-34 147.9 191 42.9
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 1.2e-33 147.5 140 57.1
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 1.2e-33 147.5 202 46.5
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 2.0e-33 146.7 192 48.4
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 4.4e-33 145.6 154 51.3
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 5.7e-33 145.2 149 55.7
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 5.7e-33 145.2 149 55.7
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 5.7e-33 145.2 154 54.5
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 7.5e-33 144.8 153 54.9
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 3.7e-32 142.5 153 55.6
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 4.9e-32 142.1 198 44.9
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 4.9e-32 142.1 132 57.6
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 4.9e-32 142.1 150 52.0
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 8.3e-32 141.4 142 54.9
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 1.1e-31 141.0 196 46.4
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 1.2e-30 137.5 136 49.3
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 1.2e-30 137.5 204 45.1
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 2.0e-30 136.7 161 52.2
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 2.9e-29 132.9 164 48.8
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.9e-28 130.2 136 55.1
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 3.3e-28 129.4 136 47.8
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 7.3e-28 128.3 140 45.7
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 2.1e-27 126.7 155 49.7
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 3.6e-27 125.9 169 48.5
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 3.6e-27 125.9 161 39.1
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 3.6e-27 125.9 143 52.4
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 1.0e-26 124.4 208 40.4
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 1.5e-25 120.6 141 50.4
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 2.6e-25 119.8 163 46.6
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 2.2e-24 116.7 211 33.6
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 1.1e-23 114.4 137 43.1
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 4.1e-23 112.5 135 43.7
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 9.5e-20 101.3 71 64.8
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 2.3e-18 96.7 141 44.0
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 1.2e-17 94.4 124 41.9
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 2.2e-16 90.1 153 37.9
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 3.2e-15 86.3 65 63.1
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.0e-14 83.6 72 69.4
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.9e-12 77.0 60 53.3
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 5.2e-10 68.9 61 50.8
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 1.3e-08 64.3 81 40.7


User provided reference genes

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