Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40493 Nelumbo nucifera HOM05D003583 ORTHO05D004169 6.1e-64 247.3 122 100.0
Nn5g31016 Nelumbo nucifera HOM05D003583 ORTHO05D004169 2.4e-52 208.8 133 80.5
Nn2g10235 Nelumbo nucifera HOM05D003583 ORTHO05D004169 4.7e-48 194.5 106 88.7
Nn5g26790 Nelumbo nucifera HOM05D003583 ORTHO05D004169 9.6e-33 143.7 137 62.8
Nn6g33306 Nelumbo nucifera HOM05D003583 ORTHO05D004169 3.1e-31 138.7 112 68.8
TAR633G0566 Trochodendron aralioides HOM05D003583 ORTHO05D004169 4.9e-29 131.3 136 56.6
TAR362G1106 Trochodendron aralioides HOM05D003583 ORTHO05D004169 1.9e-28 129.4 135 58.5
Hund05577 Selenicereus undatus HOM05D003583 ORTHO05D004169 1.7e-26 122.9 135 52.6
Solyc09g059500.3 Solanum lycopersicum HOM05D003583 ORTHO05D004169 2.3e-26 122.5 141 51.1
Sopen09g022660 Solanum pennellii HOM05D003583 ORTHO05D004169 2.3e-26 122.5 141 51.1
MBI11_g07419_MAGBIO Magnolia biondii HOM05D003583 ORTHO05D004169 3.0e-26 122.1 98 65.3
AUR62001132 Chenopodium quinoa HOM05D003583 ORTHO05D004169 3.9e-26 121.7 136 52.2
SalBow3G2553 Salvia bowleyana HOM05D003583 ORTHO05D004169 5.1e-26 121.3 140 51.4
Peaxi162Scf00068g02311 Petunia axillaris HOM05D003583 ORTHO05D004169 8.7e-26 120.6 137 51.1
CAN.G1418.4 Capsicum annuum HOM05D003583 ORTHO05D004169 1.5e-25 119.8 141 49.6
Cfa004159 Carpinus fangiana HOM05D003583 ORTHO05D004169 1.5e-25 119.8 136 52.2
Haze_15252 Corylus avellana HOM05D003583 ORTHO05D004169 1.5e-25 119.8 136 52.2
Actinidia39429 Actinidia chinensis HOM05D003583 ORTHO05D004169 1.9e-25 119.4 108 58.3
Lsat_1_v5_gn_5_180820 Lactuca sativa HOM05D003583 ORTHO05D004169 1.9e-25 119.4 143 51.0
Sed0008761 Sechium edule HOM05D003583 ORTHO05D004169 2.5e-25 119.0 100 63.0
MSTRG.17995 Avicennia marina HOM05D003583 ORTHO05D004169 3.3e-25 118.6 99 62.6
EL10Ac7g17902 Beta vulgaris HOM05D003583 ORTHO05D004169 3.3e-25 118.6 101 62.4
Cc01_g16710 Coffea canephora HOM05D003583 ORTHO05D004169 3.3e-25 118.6 147 49.7
Dinv19172 Davidia involucrata HOM05D003583 ORTHO05D004169 3.3e-25 118.6 99 62.6
CSS0028584 Camellia sinensis var. sinensis HOM05D003583 ORTHO05D004169 4.3e-25 118.2 99 61.6
MELO3C022717.2 Cucumis melo HOM05D003583 ORTHO05D004169 4.3e-25 118.2 99 62.6
Lj1A89T66 Lonicera japonica HOM05D003583 ORTHO05D004169 4.3e-25 118.2 99 62.6
Nitab4.5_0000045g0500 Nicotiana tabacum HOM05D003583 ORTHO05D004169 4.3e-25 118.2 99 61.6
Nitab4.5_0001161g0140 Nicotiana tabacum HOM05D003583 ORTHO05D004169 4.3e-25 118.2 99 61.6
Psat3g148960 Pisum sativum HOM05D003583 ORTHO05D004169 4.3e-25 118.2 135 50.4
Zm00001eb036350 Zea mays HOM05D003583 ORTHO05D004169 4.3e-25 118.2 135 49.6
Ciclev10021065m.g Citrus clementina HOM05D003583 ORTHO05D004169 5.6e-25 117.9 99 62.6
HanXRQChr01g0015291 Helianthus annuus HOM05D003583 ORTHO05D004169 5.6e-25 117.9 100 62.0
MD05G1171600 Malus domestica HOM05D003583 ORTHO05D004169 5.6e-25 117.9 149 49.0
Nitab4.5_0013864g0010 Nicotiana tabacum HOM05D003583 ORTHO05D004169 5.6e-25 117.9 100 63.0
ClCG07G002090 Citrullus lanatus HOM05D003583 ORTHO05D004169 7.3e-25 117.5 125 54.4
PGR044G2612 Punica granatum HOM05D003583 ORTHO05D004169 7.3e-25 117.5 145 49.0
CsaV3_3G030030 Cucumis sativus L. HOM05D003583 ORTHO05D004169 9.6e-25 117.1 125 54.4
Oeu030584.1 Olea europaea HOM05D003583 ORTHO05D004169 9.6e-25 117.1 99 61.6
Migut.N00631 Erythranthe guttata HOM05D003583 ORTHO05D004169 1.3e-24 116.7 97 62.9
Oeu057861.1 Olea europaea HOM05D003583 ORTHO05D004169 1.3e-24 116.7 99 60.6
QL09p051234 Quercus lobata HOM05D003583 ORTHO05D004169 1.3e-24 116.7 101 61.4
SHI46266 Sapria himalayana HOM05D003583 ORTHO05D004169 1.3e-24 116.7 99 61.6
SHI46763 Sapria himalayana HOM05D003583 ORTHO05D004169 1.3e-24 116.7 99 61.6
ATR0561G144 Amborella trichopoda HOM05D003583 ORTHO05D004169 1.6e-24 116.3 100 61.0
CAN.G874.6 Capsicum annuum HOM05D003583 ORTHO05D004169 1.6e-24 116.3 97 63.9
AUR62016547 Chenopodium quinoa HOM05D003583 ORTHO05D004169 1.6e-24 116.3 95 64.2
Dinv12649 Davidia involucrata HOM05D003583 ORTHO05D004169 1.6e-24 116.3 99 61.6
Nitab4.5_0003020g0040 Nicotiana tabacum HOM05D003583 ORTHO05D004169 1.6e-24 116.3 97 63.9
SGA_v2.0_scaffold6G03502 Striga asiatica HOM05D003583 ORTHO05D004169 1.6e-24 116.3 99 61.6
GSVIVG01003252001 Vitis vinifera HOM05D003583 ORTHO05D004169 1.6e-24 116.3 98 62.2
CiPaw.02G023700 Carya illinoinensis HOM05D003583 ORTHO05D004169 2.1e-24 115.9 97 62.9
Hma1.2p1_0226F.1_g095390 Hydrangea macrophylla HOM05D003583 ORTHO05D004169 2.1e-24 115.9 99 60.6
Lalb_Chr03g0041471 Lupinus albus HOM05D003583 ORTHO05D004169 2.1e-24 115.9 100 61.0
COL.COLO4_15618 Corchorus olitorius HOM05D003583 ORTHO05D004169 2.8e-24 115.5 99 61.6
Lj1g0010920 Lotus japonicus HOM05D003583 ORTHO05D004169 2.8e-24 115.5 135 51.9
PSO063G4910 Papaver somniferum HOM05D003583 ORTHO05D004169 2.8e-24 115.5 99 62.6
Potri.002G245900 Populus trichocarpa HOM05D003583 ORTHO05D004169 2.8e-24 115.5 99 61.6
Sabra02G0187200 Salix brachista HOM05D003583 ORTHO05D004169 2.8e-24 115.5 99 61.6
Eucgr.K02138 Eucalyptus grandis HOM05D003583 ORTHO05D004169 3.6e-24 115.2 139 48.9
Manes.12G047400 Manihot esculenta HOM05D003583 ORTHO05D004169 4.8e-24 114.8 111 56.8
Medtr7g055873 Medicago truncatula HOM05D003583 ORTHO05D004169 4.8e-24 114.8 98 61.2
SalBow6G4396 Salvia bowleyana HOM05D003583 ORTHO05D004169 4.8e-24 114.8 141 50.4
SalBow6G5082 Salvia bowleyana HOM05D003583 ORTHO05D004169 4.8e-24 114.8 141 50.4
Cpa.g.sc34.102 Carica papaya HOM05D003583 ORTHO05D004169 6.2e-24 114.4 97 61.9
Gohir.A07G199000 Gossypium hirsutum HOM05D003583 ORTHO05D004169 6.2e-24 114.4 99 60.6
Gohir.D07G205500 Gossypium hirsutum HOM05D003583 ORTHO05D004169 6.2e-24 114.4 99 60.6
Gorai.001G231500 Gossypium raimondii HOM05D003583 ORTHO05D004169 6.2e-24 114.4 99 60.6
Prupe.8G198900 Prunus persica HOM05D003583 ORTHO05D004169 6.2e-24 114.4 97 61.9
Solyc06g083350.3 Solanum lycopersicum HOM05D003583 ORTHO05D004169 6.2e-24 114.4 98 62.2
Sopen06g034720 Solanum pennellii HOM05D003583 ORTHO05D004169 6.2e-24 114.4 98 62.2
PGSC0003DMG400020100 Solanum tuberosum HOM05D003583 ORTHO05D004169 6.2e-24 114.4 98 62.2
TWI36G1542 Tripterygium wilfordii HOM05D003583 ORTHO05D004169 6.2e-24 114.4 97 61.9
PSO017G0014 Papaver somniferum HOM05D003583 ORTHO05D004169 8.1e-24 114.0 99 61.6
Rhsim13G0047800 Rhododendron simsii HOM05D003583 ORTHO05D004169 8.1e-24 114.0 134 49.3
RcHm_v2.0_Chr6g0284101 Rosa chinensis HOM05D003583 ORTHO05D004169 8.1e-24 114.0 99 60.6
AT3G07260 Arabidopsis thaliana HOM05D003583 ORTHO05D004169 1.1e-23 113.6 99 60.6
arahy.Tifrunner.gnm1.ann1.6L1LF5 Arachis hypogaea HOM05D003583 ORTHO05D004169 1.1e-23 113.6 99 59.6
arahy.Tifrunner.gnm1.ann1.SP3ESK Arachis hypogaea HOM05D003583 ORTHO05D004169 1.1e-23 113.6 99 59.6
Ca_03475_v3 Cicer arietinum L. HOM05D003583 ORTHO05D004169 1.1e-23 113.6 97 61.9
ECA236G5107 Erigeron canadensis HOM05D003583 ORTHO05D004169 1.1e-23 113.6 95 63.2
FvH4_2g18540 Fragaria vesca HOM05D003583 ORTHO05D004169 1.1e-23 113.6 97 61.9
FAN15G2515 Fragaria x ananassa HOM05D003583 ORTHO05D004169 1.1e-23 113.6 97 61.9
FAN24G2032 Fragaria x ananassa HOM05D003583 ORTHO05D004169 1.1e-23 113.6 97 61.9
MD10G1159800 Malus domestica HOM05D003583 ORTHO05D004169 1.1e-23 113.6 97 61.9
THA.LOC104822491 Tarenaya hassleriana HOM05D003583 ORTHO05D004169 1.1e-23 113.6 99 60.6
TWI75G1818 Tripterygium wilfordii HOM05D003583 ORTHO05D004169 1.1e-23 113.6 97 61.9
DCAR_018637 Daucus carota HOM05D003583 ORTHO05D004169 1.4e-23 113.2 99 60.6
Glyma.18G160200 Glycine max HOM05D003583 ORTHO05D004169 1.4e-23 113.2 97 60.8
Lalb_Chr19g0125831 Lupinus albus HOM05D003583 ORTHO05D004169 1.4e-23 113.2 97 60.8
Phvul.008G131301 Phaseolus vulgaris HOM05D003583 ORTHO05D004169 1.4e-23 113.2 97 60.8
VMungo1383G2149 Vigna mungo HOM05D003583 ORTHO05D004169 1.4e-23 113.2 97 60.8
CANSAT01G0519 Cannabis sativa HOM05D003583 ORTHO05D004169 1.8e-23 112.8 97 60.8
Glyma.08G348400 Glycine max HOM05D003583 ORTHO05D004169 1.8e-23 112.8 97 60.8
Os08g0528900 Oryza sativa ssp. japonica HOM05D003583 ORTHO05D004169 1.8e-23 112.8 117 53.8
Duzib138G0093 Durio zibethinus HOM05D003583 ORTHO05D004169 2.4e-23 112.5 99 60.6
Duzib211G0612 Durio zibethinus HOM05D003583 ORTHO05D004169 2.4e-23 112.5 97 60.8
BcaB04g19581 Brassica carinata HOM05D003583 ORTHO05D004169 3.1e-23 112.1 98 61.2
Thecc.01G220200 Theobroma cacao HOM05D003583 ORTHO05D004169 3.1e-23 112.1 99 59.6
Sed0011833 Sechium edule HOM05D003583 ORTHO05D004169 4.0e-23 111.7 95 61.1
Atru.chr6.1424 Acer truncatum HOM05D003583 ORTHO05D004169 5.3e-23 111.3 95 62.1
Manes.13G049400 Manihot esculenta HOM05D003583 ORTHO05D004169 5.3e-23 111.3 95 62.1
TPR.G6446 Trifolium pratense HOM05D003583 ORTHO05D004169 5.3e-23 111.3 95 62.1
AL4G16370 Arabidopsis lyrata HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
BcaC05g29745 Brassica carinata HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
BcaC05g29851 Brassica carinata HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
C05p60140 Brassica napus HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
BolC5t34665H Brassica oleracea HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
Carub.0003s0675 Capsella rubella HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
Carub.0003s0679 Capsella rubella HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
CARHR081870 Cardamine hirsuta HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
Thhalv10021140m.g Eutrema salsugineum HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
Sp3g06180 Schrenkiella parvula HOM05D003583 ORTHO05D004169 6.9e-23 110.9 99 59.6
Thhalv10004601m.g Eutrema salsugineum HOM05D003583 ORTHO05D004169 9.0e-23 110.5 136 47.8
FAN27G2245 Fragaria x ananassa HOM05D003583 ORTHO05D004169 9.0e-23 110.5 97 60.8
HanXRQChr04g0108021 Helianthus annuus HOM05D003583 ORTHO05D004169 9.0e-23 110.5 95 62.1
BcaC04g23769 Brassica carinata HOM05D003583 ORTHO05D004169 1.2e-22 110.2 97 59.8
A09p04570 Brassica napus HOM05D003583 ORTHO05D004169 1.2e-22 110.2 97 59.8
C09p04880 Brassica napus HOM05D003583 ORTHO05D004169 1.2e-22 110.2 97 59.8
BolC9t53416H Brassica oleracea HOM05D003583 ORTHO05D004169 1.2e-22 110.2 97 59.8
BraA09t36092Z Brassica rapa HOM05D003583 ORTHO05D004169 1.2e-22 110.2 97 59.8
Sc05g0001940 Simmondsia chinensis HOM05D003583 ORTHO05D004169 1.2e-22 110.2 94 61.7
A05p40990 Brassica napus HOM05D003583 ORTHO05D004169 1.5e-22 109.8 97 59.8
BraA05t22826Z Brassica rapa HOM05D003583 ORTHO05D004169 1.5e-22 109.8 97 59.8
HPP92_003545 Vanilla planifolia HOM05D003583 ORTHO05D004169 1.5e-22 109.8 89 62.9
Aa31LG5G17810 Aethionema arabicum HOM05D003583 ORTHO05D004169 2.6e-22 109.0 99 58.6
Aqoxy5G00027 Aquilegia oxysepala HOM05D003583 ORTHO05D004169 2.6e-22 109.0 98 59.2
AL3G18500 Arabidopsis lyrata HOM05D003583 ORTHO05D004169 3.4e-22 108.6 99 58.6
AL3G18560 Arabidopsis lyrata HOM05D003583 ORTHO05D004169 3.4e-22 108.6 99 58.6
AT3G07220 Arabidopsis thaliana HOM05D003583 ORTHO05D004169 3.4e-22 108.6 99 58.6
Rhsim01G0252900 Rhododendron simsii HOM05D003583 ORTHO05D004169 1.3e-21 106.7 101 57.4
vmacro14733 Vaccinium macrocarpon HOM05D003583 ORTHO05D004169 6.4e-21 104.4 101 58.4
Pp3c20_16530 Physcomitrium patens HOM05D003583 ORTHO05D004169 8.4e-21 104.0 103 51.5
HPP92_008214 Vanilla planifolia HOM05D003583 ORTHO05D004169 8.4e-21 104.0 89 57.3
Gohir.D08G212800 Gossypium hirsutum HOM05D003583 ORTHO05D004169 1.1e-20 103.6 99 55.6
Mapoly0037s0072 Marchantia polymorpha HOM05D003583 ORTHO05D004169 1.9e-20 102.8 89 58.4
Pp3c23_3920 Physcomitrium patens HOM05D003583 ORTHO05D004169 1.9e-20 102.8 141 43.3
Pp3c23_9360 Physcomitrium patens HOM05D003583 ORTHO05D004169 1.9e-20 102.8 103 50.5
SEGI_31201 Sequoiadendron giganteum HOM05D003583 ORTHO05D004169 2.4e-20 102.4 96 55.2
Oeu009710.1 Olea europaea HOM05D003583 ORTHO05D004169 4.2e-20 101.7 99 53.5
unitig_749.g13590 Utricularia gibba HOM05D003583 ORTHO05D004169 9.3e-20 100.5 99 53.5
Pp3c24_8070 Physcomitrium patens HOM05D003583 ORTHO05D004169 1.6e-19 99.8 103 49.5
SMO166G0009 Selaginella moellendorffii HOM05D003583 ORTHO05D004169 2.1e-19 99.4 127 45.7
Nn2g11337 Nelumbo nucifera HOM05D003583 ORTHO05D004169 2.7e-19 99.0 102 56.9
SMO115G0166 Selaginella moellendorffii HOM05D003583 ORTHO05D004169 2.7e-19 99.0 89 57.3
Nn7g37781 Nelumbo nucifera HOM05D003583 ORTHO05D004169 1.7e-18 96.3 114 49.1
Lalb_Chr19g0125841 Lupinus albus HOM05D003583 ORTHO05D004169 2.3e-18 95.9 96 49.0
unitig_60.g25602 Utricularia gibba HOM05D003583 ORTHO05D004169 2.3e-18 95.9 110 51.8
unitig_0.g373 Utricularia gibba HOM05D003583 ORTHO05D004169 3.9e-18 95.1 111 49.5
CDE06G0189 Ceratophyllum demersum HOM05D003583 ORTHO05D004169 5.1e-18 94.7 99 50.5
Lalb_Chr03g0041461 Lupinus albus HOM05D003583 ORTHO05D004169 8.7e-18 94.0 97 51.5
vmacro02783 Vaccinium macrocarpon HOM05D003583 ORTHO05D004169 4.3e-17 91.7 100 50.0
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 5.6e-17 91.3 99 54.5
Os09g0505200 Oryza sativa ssp. japonica HOM05D003583 ORTHO05D004169 7.3e-17 90.9 87 55.2
Lalb_Chr07g0194191 Lupinus albus HOM05D003583 ORTHO05D004169 4.8e-16 88.2 99 47.5
AagrBONN_evm.TU.Sc2ySwM_362.2525 Anthoceros agrestis HOM05D003583 ORTHO05D004169 8.1e-16 87.4 92 51.1
CBR_g31665 Chara braunii HOM05D003583 ORTHO05D004169 8.1e-16 87.4 98 50.0
SEGI_22924 Sequoiadendron giganteum HOM05D003583 ORTHO05D004169 2.4e-15 85.9 100 46.0
Zm00001eb169940 Zea mays HOM05D003583 ORTHO05D004169 6.9e-15 84.3 102 45.1
SEGI_31438 Sequoiadendron giganteum HOM05D003583 ORTHO05D004169 3.8e-13 78.6 85 49.4
CANSAT01G1829 Cannabis sativa HOM05D003583 ORTHO05D004169 8.4e-13 77.4 95 46.3
RcHm_v2.0_Chr5g0045161 Rosa chinensis HOM05D003583 ORTHO05D004169 9.3e-12 73.9 63 55.6
Gorai.004G226900 Gossypium raimondii HOM05D003583 ORTHO05D004169 2.1e-11 72.8 115 45.2
Cfa015657 Carpinus fangiana HOM05D003583 ORTHO05D004169 6.0e-11 71.2 42 73.8
RcHm_v2.0_Chr5g0045171 Rosa chinensis HOM05D003583 ORTHO05D004169 1.3e-10 70.1 63 54.0
RcHm_v2.0_Chr6g0245631 Rosa chinensis HOM05D003583 ORTHO05D004169 3.9e-10 68.6 63 54.0
Gohir.A08G195500 Gossypium hirsutum HOM05D003583 ORTHO05D004169 1.1e-09 67.0 72 51.4
RcHm_v2.0_Chr1g0319631 Rosa chinensis HOM05D003583 ORTHO05D004169 5.6e-09 64.7 53 56.6
TAR633G0104 Trochodendron aralioides HOM05D003583 ORTHO05D004169 1.6e-08 63.2 86 44.2
CANSAT01G3274 Cannabis sativa HOM05D003583 ORTHO05D004169 2.8e-08 62.4 90 38.9
PGR044G2014 Punica granatum HOM05D003583 ORTHO05D004169 8.1e-08 60.8 88 45.5
Cre16.g648800 Chlamydomonas reinhardtii HOM05D003583 ORTHO05D004169 1.5e-06 56.6 84 40.5


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