Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40452 Nelumbo nucifera HOM05D002247 ORTHO05D002659 1.9e-26 121.7 59 100.0
TAR626G1205 Trochodendron aralioides HOM05D002247 ORTHO05D002659 2.8e-14 81.3 70 60.0
Sopen11g016650 Solanum pennellii HOM05D002247 ORTHO05D002659 3.7e-14 80.9 69 60.9
PGSC0003DMG400019767 Solanum tuberosum HOM05D002247 ORTHO05D002659 3.7e-14 80.9 69 60.9
CAN.G1323.15 Capsicum annuum HOM05D002247 ORTHO05D002659 4.8e-14 80.5 69 60.9
PGSC0003DMG400030451 Solanum tuberosum HOM05D002247 ORTHO05D002659 6.3e-14 80.1 69 59.4
CAN.G1323.16 Capsicum annuum HOM05D002247 ORTHO05D002659 8.2e-14 79.7 69 59.4
Lj7P697T54 Lonicera japonica HOM05D002247 ORTHO05D002659 8.2e-14 79.7 69 58.0
Peaxi162Scf00473g10011 Petunia axillaris HOM05D002247 ORTHO05D002659 1.1e-13 79.3 69 59.4
CDE02G1551 Ceratophyllum demersum HOM05D002247 ORTHO05D002659 1.8e-13 78.6 69 59.4
Nn4g24937 Nelumbo nucifera HOM05D002247 ORTHO05D002659 1.8e-13 78.6 69 60.9
Solyc06g082270.2 Solanum lycopersicum HOM05D002247 ORTHO05D002659 1.8e-13 78.6 69 58.0
Solyc11g039910.2 Solanum lycopersicum HOM05D002247 ORTHO05D002659 1.8e-13 78.6 68 60.3
Sopen06g033650 Solanum pennellii HOM05D002247 ORTHO05D002659 1.8e-13 78.6 69 58.0
Nitab4.5_0000771g0050 Nicotiana tabacum HOM05D002247 ORTHO05D002659 2.4e-13 78.2 69 56.5
MSTRG.11683 Avicennia marina HOM05D002247 ORTHO05D002659 3.1e-13 77.8 68 57.4
DCAR_001731 Daucus carota HOM05D002247 ORTHO05D002659 5.3e-13 77.0 69 58.0
Nitab4.5_0005356g0010 Nicotiana tabacum HOM05D002247 ORTHO05D002659 6.9e-13 76.6 70 55.7
Dinv23395 Davidia involucrata HOM05D002247 ORTHO05D002659 1.5e-12 75.5 69 55.1
TAR383G0314 Trochodendron aralioides HOM05D002247 ORTHO05D002659 2.6e-12 74.7 68 57.4
Actinidia18213 Actinidia chinensis HOM05D002247 ORTHO05D002659 4.5e-12 73.9 69 55.1
SalBow4G1966 Salvia bowleyana HOM05D002247 ORTHO05D002659 4.5e-12 73.9 68 55.9
CSS0029229 Camellia sinensis var. sinensis HOM05D002247 ORTHO05D002659 7.7e-12 73.2 69 55.1
SGA_v2.0_scaffold103G30036 Striga asiatica HOM05D002247 ORTHO05D002659 1.0e-11 72.8 67 55.2
MBI18_g10391_MAGBIO Magnolia biondii HOM05D002247 ORTHO05D002659 1.3e-11 72.4 68 58.8
THA.LOC104811262 Tarenaya hassleriana HOM05D002247 ORTHO05D002659 2.9e-11 71.2 69 55.1
Atru.chr7.2054 Acer truncatum HOM05D002247 ORTHO05D002659 3.8e-11 70.9 68 55.9
Nn8g39060 Nelumbo nucifera HOM05D002247 ORTHO05D002659 3.8e-11 70.9 69 56.5
Rhsim07G0145400 Rhododendron simsii HOM05D002247 ORTHO05D002659 3.8e-11 70.9 69 55.1
Ciclev10009418m.g Citrus clementina HOM05D002247 ORTHO05D002659 5.0e-11 70.5 68 55.9
Nn6g35330 Nelumbo nucifera HOM05D002247 ORTHO05D002659 5.0e-11 70.5 69 56.5
CSS0026258 Camellia sinensis var. sinensis HOM05D002247 ORTHO05D002659 6.5e-11 70.1 67 55.2
CSS0032590 Camellia sinensis var. sinensis HOM05D002247 ORTHO05D002659 6.5e-11 70.1 67 55.2
DCAR_031997 Daucus carota HOM05D002247 ORTHO05D002659 6.5e-11 70.1 70 52.9
ECA240G0152 Erigeron canadensis HOM05D002247 ORTHO05D002659 2.5e-10 68.2 67 50.7
HanXRQChr03g0081031 Helianthus annuus HOM05D002247 ORTHO05D002659 2.5e-10 68.2 66 54.5
HanXRQChr13g0411141 Helianthus annuus HOM05D002247 ORTHO05D002659 2.5e-10 68.2 66 53.0
SalBow7G0882 Salvia bowleyana HOM05D002247 ORTHO05D002659 2.5e-10 68.2 68 52.9
TWI63G0517 Tripterygium wilfordii HOM05D002247 ORTHO05D002659 4.2e-10 67.4 68 52.9
TWI32G0407 Tripterygium wilfordii HOM05D002247 ORTHO05D002659 9.4e-10 66.2 68 51.5
Aa31LG3G15510 Aethionema arabicum HOM05D002247 ORTHO05D002659 2.7e-09 64.7 69 49.3
GSVIVG01015301001 Vitis vinifera HOM05D002247 ORTHO05D002659 2.7e-09 64.7 69 53.6
Carub.0004s1933 Capsella rubella HOM05D002247 ORTHO05D002659 3.6e-09 64.3 68 52.9
HPP92_006364 Vanilla planifolia HOM05D002247 ORTHO05D002659 4.7e-09 63.9 64 51.6
HPP92_011507 Vanilla planifolia HOM05D002247 ORTHO05D002659 4.7e-09 63.9 64 51.6
Gohir.D06G090800 Gossypium hirsutum HOM05D002247 ORTHO05D002659 6.1e-09 63.5 68 51.5
Duzib150G0910 Durio zibethinus HOM05D002247 ORTHO05D002659 7.9e-09 63.2 68 52.9
Thecc.09G047900 Theobroma cacao HOM05D002247 ORTHO05D002659 7.9e-09 63.2 68 52.9
Gohir.A06G091500 Gossypium hirsutum HOM05D002247 ORTHO05D002659 1.0e-08 62.8 68 51.5
Gohir.A05G045300 Gossypium hirsutum HOM05D002247 ORTHO05D002659 1.4e-08 62.4 68 52.9
Gohir.D05G047000 Gossypium hirsutum HOM05D002247 ORTHO05D002659 1.4e-08 62.4 68 52.9
Gorai.009G048300 Gossypium raimondii HOM05D002247 ORTHO05D002659 1.4e-08 62.4 68 52.9
Gorai.010G104600 Gossypium raimondii HOM05D002247 ORTHO05D002659 1.4e-08 62.4 68 50.0
Nitab4.5_0000771g0030 Nicotiana tabacum HOM05D002247 ORTHO05D002659 1.4e-08 62.4 44 63.6
Nitab4.5_0005356g0020 Nicotiana tabacum HOM05D002247 ORTHO05D002659 1.4e-08 62.4 44 63.6
Lalb_Chr16g0385041 Lupinus albus HOM05D002247 ORTHO05D002659 1.8e-08 62.0 70 50.0
MBI14_g02795_MAGBIO Magnolia biondii HOM05D002247 ORTHO05D002659 1.8e-08 62.0 68 51.5
Atru.chr7.1465 Acer truncatum HOM05D002247 ORTHO05D002659 2.3e-08 61.6 68 51.5
THA.LOC104807535 Tarenaya hassleriana HOM05D002247 ORTHO05D002659 2.3e-08 61.6 75 50.7
MSTRG.10601 Avicennia marina HOM05D002247 ORTHO05D002659 3.0e-08 61.2 66 54.5
Dinv36685 Davidia involucrata HOM05D002247 ORTHO05D002659 3.0e-08 61.2 69 49.3
Duzib187G0937 Durio zibethinus HOM05D002247 ORTHO05D002659 3.0e-08 61.2 68 51.5
Migut.A00183 Erythranthe guttata HOM05D002247 ORTHO05D002659 3.0e-08 61.2 68 50.0
Hma1.2p1_0571F.1_g180640 Hydrangea macrophylla HOM05D002247 ORTHO05D002659 3.0e-08 61.2 69 49.3
Lsat_1_v5_gn_5_57261 Lactuca sativa HOM05D002247 ORTHO05D002659 3.0e-08 61.2 72 45.8
COL.COLO4_21000 Corchorus olitorius HOM05D002247 ORTHO05D002659 3.9e-08 60.8 68 51.5
Duzib168G1230 Durio zibethinus HOM05D002247 ORTHO05D002659 3.9e-08 60.8 67 52.2
CARHR132180 Cardamine hirsuta HOM05D002247 ORTHO05D002659 5.1e-08 60.5 69 50.7
Lj7A666T75 Lonicera japonica HOM05D002247 ORTHO05D002659 5.1e-08 60.5 68 52.9
Potri.006G164980 Populus trichocarpa HOM05D002247 ORTHO05D002659 5.1e-08 60.5 69 50.7
Sp4g19730 Schrenkiella parvula HOM05D002247 ORTHO05D002659 6.7e-08 60.1 66 53.0
AT2G37410 Arabidopsis thaliana HOM05D002247 ORTHO05D002659 8.8e-08 59.7 64 54.7
Cpa.g.sc78.20 Carica papaya HOM05D002247 ORTHO05D002659 8.8e-08 59.7 70 52.9
Gohir.D13G193700 Gossypium hirsutum HOM05D002247 ORTHO05D002659 8.8e-08 59.7 68 51.5
Gorai.013G219800 Gossypium raimondii HOM05D002247 ORTHO05D002659 8.8e-08 59.7 68 51.5
THA.LOC104811079 Tarenaya hassleriana HOM05D002247 ORTHO05D002659 8.8e-08 59.7 73 49.3
Ciclev10009399m.g Citrus clementina HOM05D002247 ORTHO05D002659 1.1e-07 59.3 67 52.2
Manes.16G108800 Manihot esculenta HOM05D002247 ORTHO05D002659 1.1e-07 59.3 69 47.8
ClCG03G016130 Citrullus lanatus HOM05D002247 ORTHO05D002659 1.5e-07 58.9 57 57.9
MELO3C015413.2 Cucumis melo HOM05D002247 ORTHO05D002659 1.5e-07 58.9 57 57.9
CsaV3_1G039810 Cucumis sativus L. HOM05D002247 ORTHO05D002659 1.5e-07 58.9 57 57.9
Lalb_Chr24g0397291 Lupinus albus HOM05D002247 ORTHO05D002659 1.5e-07 58.9 67 52.2
Potri.018G087900 Populus trichocarpa HOM05D002247 ORTHO05D002659 1.5e-07 58.9 69 47.8
CSS0012697 Camellia sinensis var. sinensis HOM05D002247 ORTHO05D002659 2.0e-07 58.5 68 50.0
CANSAT64G2802 Cannabis sativa HOM05D002247 ORTHO05D002659 2.0e-07 58.5 69 50.7
CiPaw.03G225200 Carya illinoinensis HOM05D002247 ORTHO05D002659 2.0e-07 58.5 70 47.1
Sed0018400 Sechium edule HOM05D002247 ORTHO05D002659 2.0e-07 58.5 57 56.1
Thecc.09G100500 Theobroma cacao HOM05D002247 ORTHO05D002659 2.0e-07 58.5 69 50.7
Psat7g129040 Pisum sativum HOM05D002247 ORTHO05D002659 2.6e-07 58.2 71 50.7
MSTRG.26385 Avicennia marina HOM05D002247 ORTHO05D002659 3.3e-07 57.8 56 57.1
BcaB01g03778 Brassica carinata HOM05D002247 ORTHO05D002659 3.3e-07 57.8 69 46.4
Cfa003180 Carpinus fangiana HOM05D002247 ORTHO05D002659 3.3e-07 57.8 70 47.1
PSO210G6201 Papaver somniferum HOM05D002247 ORTHO05D002659 3.3e-07 57.8 63 52.4
Sabra18G0076200 Salix brachista HOM05D002247 ORTHO05D002659 3.3e-07 57.8 69 46.4
ClCG11G002130 Citrullus lanatus HOM05D002247 ORTHO05D002659 4.4e-07 57.4 65 53.8
MELO3C004589.2 Cucumis melo HOM05D002247 ORTHO05D002659 4.4e-07 57.4 65 53.8
CsaV3_2G001910 Cucumis sativus L. HOM05D002247 ORTHO05D002659 4.4e-07 57.4 65 53.8
PSO210G2193 Papaver somniferum HOM05D002247 ORTHO05D002659 4.4e-07 57.4 66 50.0
Potri.008G176500 Populus trichocarpa HOM05D002247 ORTHO05D002659 4.4e-07 57.4 70 47.1
QL02p041557 Quercus lobata HOM05D002247 ORTHO05D002659 4.4e-07 57.4 70 45.7
Sabra06G0126400 Salix brachista HOM05D002247 ORTHO05D002659 4.4e-07 57.4 69 49.3
Sc08g0008020 Simmondsia chinensis HOM05D002247 ORTHO05D002659 4.4e-07 57.4 57 56.1
SGA_v2.0_scaffold19G08726 Striga asiatica HOM05D002247 ORTHO05D002659 4.4e-07 57.4 66 51.5
SGA_v2.0_scaffold512G52638 Striga asiatica HOM05D002247 ORTHO05D002659 4.4e-07 57.4 66 51.5
BraA03t11305Z Brassica rapa HOM05D002247 ORTHO05D002659 5.7e-07 57.0 69 47.8
Ca_29574_v3 Cicer arietinum L. HOM05D002247 ORTHO05D002659 5.7e-07 57.0 67 50.7
COL.COLO4_34742 Corchorus olitorius HOM05D002247 ORTHO05D002659 5.7e-07 57.0 74 47.3
Glyma.16G078500 Glycine max HOM05D002247 ORTHO05D002659 5.7e-07 57.0 70 48.6
Mapoly0028s0095 Marchantia polymorpha HOM05D002247 ORTHO05D002659 5.7e-07 57.0 68 47.1
C04p10620 Brassica napus HOM05D002247 ORTHO05D002659 7.4e-07 56.6 68 47.1
BolC3t14818H Brassica oleracea HOM05D002247 ORTHO05D002659 7.4e-07 56.6 68 47.1
BolC4t22653H Brassica oleracea HOM05D002247 ORTHO05D002659 7.4e-07 56.6 68 47.1
BraA05t19822Z Brassica rapa HOM05D002247 ORTHO05D002659 7.4e-07 56.6 68 47.1
CANSAT80G0857 Cannabis sativa HOM05D002247 ORTHO05D002659 7.4e-07 56.6 69 49.3
Nn1g05090 Nelumbo nucifera HOM05D002247 ORTHO05D002659 7.4e-07 56.6 64 53.1
Ca_25574_v3 Cicer arietinum L. HOM05D002247 ORTHO05D002659 9.7e-07 56.2 66 50.0
Thhalv10017215m.g Eutrema salsugineum HOM05D002247 ORTHO05D002659 9.7e-07 56.2 69 47.8
Glyma.01G007700 Glycine max HOM05D002247 ORTHO05D002659 9.7e-07 56.2 66 48.5
Glyma.20G017300 Glycine max HOM05D002247 ORTHO05D002659 9.7e-07 56.2 67 50.7
Lalb_Chr14g0371871 Lupinus albus HOM05D002247 ORTHO05D002659 9.7e-07 56.2 65 49.2
PSO455G0055 Papaver somniferum HOM05D002247 ORTHO05D002659 9.7e-07 56.2 63 50.8
A05p08540 Brassica napus HOM05D002247 ORTHO05D002659 1.3e-06 55.8 66 48.5
C03p24250 Brassica napus HOM05D002247 ORTHO05D002659 1.3e-06 55.8 69 46.4
FAN02G3639 Fragaria x ananassa HOM05D002247 ORTHO05D002659 1.3e-06 55.8 66 50.0
HanXRQChr16g0509501 Helianthus annuus HOM05D002247 ORTHO05D002659 1.3e-06 55.8 66 50.0
PSO541G5509 Papaver somniferum HOM05D002247 ORTHO05D002659 1.3e-06 55.8 63 50.8
PSO675G2862 Papaver somniferum HOM05D002247 ORTHO05D002659 1.3e-06 55.8 63 50.8
BcaC01g05618 Brassica carinata HOM05D002247 ORTHO05D002659 1.7e-06 55.5 68 45.6
BcaC01g05619 Brassica carinata HOM05D002247 ORTHO05D002659 1.7e-06 55.5 68 45.6
MD02G1065800 Malus domestica HOM05D002247 ORTHO05D002659 1.7e-06 55.5 72 48.6
Medtr6g088745 Medicago truncatula HOM05D002247 ORTHO05D002659 1.7e-06 55.5 66 48.5
FvH4_6g25200 Fragaria vesca HOM05D002247 ORTHO05D002659 2.2e-06 55.1 64 50.0
FAN09G0772 Fragaria x ananassa HOM05D002247 ORTHO05D002659 2.2e-06 55.1 64 50.0
Gohir.A13G186900 Gossypium hirsutum HOM05D002247 ORTHO05D002659 2.2e-06 55.1 68 48.5
Lsat_1_v5_gn_5_144881 Lactuca sativa HOM05D002247 ORTHO05D002659 2.8e-06 54.7 69 49.3
Phvul.002G095500 Phaseolus vulgaris HOM05D002247 ORTHO05D002659 2.8e-06 54.7 56 55.4
Sabra08G0134400 Salix brachista HOM05D002247 ORTHO05D002659 2.8e-06 54.7 70 44.3
Sed0018872 Sechium edule HOM05D002247 ORTHO05D002659 2.8e-06 54.7 65 52.3
Lsat_1_v5_gn_8_98400 Lactuca sativa HOM05D002247 ORTHO05D002659 3.7e-06 54.3 66 47.0
Lj4g0005323 Lotus japonicus HOM05D002247 ORTHO05D002659 3.7e-06 54.3 67 47.8
Manes.03G027100 Manihot esculenta HOM05D002247 ORTHO05D002659 3.7e-06 54.3 69 44.9
Peaxi162Scf00720g00045 Petunia axillaris HOM05D002247 ORTHO05D002659 3.7e-06 54.3 56 53.6
Psat5g240400 Pisum sativum HOM05D002247 ORTHO05D002659 3.7e-06 54.3 66 47.0
AagrBONN_evm.TU.Sc2ySwM_228.5246 Anthoceros agrestis HOM05D002247 ORTHO05D002659 4.8e-06 53.9 68 44.1
Oeu000356.1 Olea europaea HOM05D002247 ORTHO05D002659 4.8e-06 53.9 66 47.0
Os07g0604500 Oryza sativa ssp. japonica HOM05D002247 ORTHO05D002659 4.8e-06 53.9 69 46.4
Prupe.4G283200 Prunus persica HOM05D002247 ORTHO05D002659 4.8e-06 53.9 75 46.7
Prupe.5G013800 Prunus persica HOM05D002247 ORTHO05D002659 4.8e-06 53.9 75 46.7
SEGI_28118 Sequoiadendron giganteum HOM05D002247 ORTHO05D002659 4.8e-06 53.9 64 46.9
ATR0602G158 Amborella trichopoda HOM05D002247 ORTHO05D002659 6.3e-06 53.5 67 44.8
Nitab4.5_0000363g0100 Nicotiana tabacum HOM05D002247 ORTHO05D002659 6.3e-06 53.5 56 53.6
Phvul.004G176000 Phaseolus vulgaris HOM05D002247 ORTHO05D002659 6.3e-06 53.5 67 46.3
VMungo0464G0745 Vigna mungo HOM05D002247 ORTHO05D002659 6.3e-06 53.5 56 53.6
arahy.Tifrunner.gnm1.ann1.CGHP2W Arachis hypogaea HOM05D002247 ORTHO05D002659 8.2e-06 53.1 67 44.8
MD15G1196700 Malus domestica HOM05D002247 ORTHO05D002659 8.2e-06 53.1 75 45.3
SEGI_03620 Sequoiadendron giganteum HOM05D002247 ORTHO05D002659 8.2e-06 53.1 66 48.5
TPR.G21384 Trifolium pratense HOM05D002247 ORTHO05D002659 8.2e-06 53.1 66 47.0


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