Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40403 Nelumbo nucifera HOM05D021794 ORTHO05D016335 3.9e-199 698.4 470 100.0
Aqoxy7G02994 Aquilegia oxysepala HOM05D021794 ORTHO05D009846 2.0e-22 111.3 489 33.1
PSO063G5953 Papaver somniferum HOM05D021794 ORTHO05D016335 6.7e-18 96.3 511 39.3
PSO170G4909 Papaver somniferum HOM05D021794 ORTHO05D016335 3.8e-13 80.5 511 38.6
Rhsim07G0169800 Rhododendron simsii HOM05D033576 ORTHO05D009846 8.5e-13 79.3 504 30.8
Ah.10g031940 Amaranthus hybridus HOM05D003021 ORTHO05D002235 1.4e-10 72.0 114 49.1
MBI14_g19445_MAGBIO Magnolia biondii HOM05D021794 ORTHO05D009846 1.2e-09 68.9 487 28.7
HPP92_015807 Vanilla planifolia HOM05D031498 ORTHO05D016335 3.4e-09 67.4 46 73.9
AUR62042563 Chenopodium quinoa HOM05D003021 ORTHO05D002235 4.4e-09 67.0 52 75.0
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 5.7e-09 66.6 70 57.1
TAR629G0828 Trochodendron aralioides HOM05D003021 ORTHO05D002235 7.5e-09 66.2 89 48.3
AUR62018150 Chenopodium quinoa HOM05D003021 ORTHO05D002235 9.8e-09 65.9 65 66.2
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 1.3e-08 65.5 54 68.5
MSTRG.11810 Avicennia marina HOM05D009522 ORTHO05D009846 1.7e-08 65.1 58 62.1
Lj2g0010760 Lotus japonicus HOM05D003021 ORTHO05D002235 1.7e-08 65.1 92 47.8
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.2e-08 64.7 66 59.1
CSS0042635 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.2e-08 64.7 66 59.1
Manes.01G099000 Manihot esculenta HOM05D003021 ORTHO05D002235 2.2e-08 64.7 75 53.3
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 2.8e-08 64.3 114 41.2
Sed0005734 Sechium edule HOM05D003021 ORTHO05D002235 2.8e-08 64.3 55 63.6
CiPaw.07G212500 Carya illinoinensis HOM05D013263 ORTHO05D009846 3.7e-08 63.9 434 28.6
Dinv10680 Davidia involucrata HOM05D003021 ORTHO05D002235 3.7e-08 63.9 58 62.1
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 6.3e-08 63.2 68 54.4
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 6.3e-08 63.2 64 60.9
THA.LOC104822343 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 6.3e-08 63.2 54 64.8
MELO3C022022.2 Cucumis melo HOM05D003021 ORTHO05D002235 8.3e-08 62.8 54 64.8
CsaV3_5G038410 Cucumis sativus L. HOM05D003021 ORTHO05D002235 8.3e-08 62.8 54 64.8
Os03g0211400 Oryza sativa ssp. japonica HOM05D003021 ORTHO05D002235 8.3e-08 62.8 63 57.1
Sp7g02590 Schrenkiella parvula HOM05D003021 ORTHO05D002235 8.3e-08 62.8 75 52.0
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 8.3e-08 62.8 63 55.6
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 1.1e-07 62.4 55 63.6
Haze_21737 Corylus avellana HOM05D014278 ORTHO05D009846 1.1e-07 62.4 37 86.5
HanXRQChr15g0488721 Helianthus annuus HOM05D003021 ORTHO05D002235 1.1e-07 62.4 54 66.7
Lj8P473T2 Lonicera japonica HOM05D031498 ORTHO05D016335 1.1e-07 62.4 114 40.4
Aqoxy3G03562 Aquilegia oxysepala HOM05D003021 ORTHO05D002235 1.8e-07 61.6 60 58.3
AL7G50940 Arabidopsis lyrata HOM05D003021 ORTHO05D002235 1.8e-07 61.6 56 60.7
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.8e-07 61.6 70 54.3
Manes.16G135600 Manihot esculenta HOM05D014278 ORTHO05D009846 1.8e-07 61.6 479 29.6
Zm00001eb400410 Zea mays HOM05D003021 ORTHO05D002235 1.8e-07 61.6 56 62.5
Lj1g0014126 Lotus japonicus HOM05D003021 ORTHO05D002235 2.4e-07 61.2 60 58.3
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 2.4e-07 61.2 88 48.9
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 2.4e-07 61.2 55 65.5
AL6G26280 Arabidopsis lyrata HOM05D009950 ORTHO05D002235 3.1e-07 60.8 95 43.2
MSTRG.15459 Avicennia marina HOM05D003021 ORTHO05D002235 3.1e-07 60.8 52 67.3
BcaB06g27294 Brassica carinata HOM05D003021 ORTHO05D002235 3.1e-07 60.8 61 57.4
C04p45710 Brassica napus HOM05D003021 ORTHO05D002235 3.1e-07 60.8 61 57.4
BolC4t26155H Brassica oleracea HOM05D003021 ORTHO05D002235 3.1e-07 60.8 61 57.4
CSS0009655 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 3.1e-07 60.8 62 58.1
Carub.0007s3655 Capsella rubella HOM05D003021 ORTHO05D002235 3.1e-07 60.8 56 60.7
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 3.1e-07 60.8 64 57.8
Migut.H00652 Erythranthe guttata HOM05D003021 ORTHO05D002235 3.1e-07 60.8 55 63.6
Thhalv10027728m.g Eutrema salsugineum HOM05D003021 ORTHO05D002235 3.1e-07 60.8 61 57.4
HanXRQChr09g0264151 Helianthus annuus HOM05D003021 ORTHO05D002235 3.1e-07 60.8 54 66.7
HanXRQChr16g0502531 Helianthus annuus HOM05D003021 ORTHO05D002235 3.1e-07 60.8 101 43.6
PGR031G3799 Punica granatum HOM05D009522 ORTHO05D009846 3.1e-07 60.8 480 28.5
THA.LOC104805496 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 3.1e-07 60.8 159 35.2
unitig_744.g24000 Utricularia gibba HOM05D003021 ORTHO05D002235 3.1e-07 60.8 60 60.0
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 4.1e-07 60.5 62 56.5
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 4.1e-07 60.5 58 60.3
Nitab4.5_0001211g0040 Nicotiana tabacum HOM05D003021 ORTHO05D022173 5.4e-07 60.1 59 59.3
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 5.4e-07 60.1 64 54.7
Glyma.13G058900 Glycine max HOM05D003021 ORTHO05D002235 7.0e-07 59.7 54 64.8
Lj7C750T8 Lonicera japonica HOM05D031498 ORTHO05D009846 7.0e-07 59.7 228 30.3
Lj9P468T32 Lonicera japonica HOM05D003021 ORTHO05D002235 7.0e-07 59.7 59 55.9
Oeu000639.1 Olea europaea HOM05D003021 ORTHO05D002235 7.0e-07 59.7 61 57.4
Sabra17G0079400 Salix brachista HOM05D003021 ORTHO05D002235 7.0e-07 59.7 64 53.1
Sopen03g034540 Solanum pennellii HOM05D003021 ORTHO05D022173 7.0e-07 59.7 59 59.3
C02p61480 Brassica napus HOM05D009040 ORTHO05D002235 9.1e-07 59.3 87 46.0
BolC2t12199H Brassica oleracea HOM05D009040 ORTHO05D002235 9.1e-07 59.3 87 46.0
CARHR263020 Cardamine hirsuta HOM05D003021 ORTHO05D002235 9.1e-07 59.3 56 58.9
Haze_07672 Corylus avellana HOM05D003021 ORTHO05D002235 9.1e-07 59.3 53 66.0
AT5G39380 Arabidopsis thaliana HOM05D003021 ORTHO05D002235 1.2e-06 58.9 69 52.2
BcaC06g33168 Brassica carinata HOM05D009040 ORTHO05D002235 1.2e-06 58.9 76 50.0
ClCG04G012000 Citrullus lanatus HOM05D003021 ORTHO05D002235 1.2e-06 58.9 118 39.8
Oeu062145.1 Olea europaea HOM05D003021 ORTHO05D002235 1.2e-06 58.9 86 51.2
PGSC0003DMG400024656 Solanum tuberosum HOM05D003021 ORTHO05D022173 1.2e-06 58.9 59 59.3
AUR62008485 Chenopodium quinoa HOM05D003021 ORTHO05D002235 1.6e-06 58.5 53 60.4
AUR62021603 Chenopodium quinoa HOM05D003021 ORTHO05D002235 1.6e-06 58.5 53 60.4
MELO3C002008.2 Cucumis melo HOM05D003021 ORTHO05D002235 1.6e-06 58.5 93 45.2
ECA240G3142 Erigeron canadensis HOM05D009522 ORTHO05D009846 1.6e-06 58.5 40 77.5
Glyma.18G264100 Glycine max HOM05D003021 ORTHO05D002235 1.6e-06 58.5 54 59.3
HanXRQChr14g0448711 Helianthus annuus HOM05D003021 ORTHO05D002235 1.6e-06 58.5 80 51.2
Psat4g048880 Pisum sativum HOM05D014856 ORTHO05D002235 1.6e-06 58.5 95 44.2
PGR083G2506 Punica granatum HOM05D003021 ORTHO05D002235 1.6e-06 58.5 79 48.1
Lj4g0020297 Lotus japonicus HOM05D014856 ORTHO05D002235 2.0e-06 58.2 41 70.7
Medtr4g109220 Medicago truncatula HOM05D014856 ORTHO05D002235 2.0e-06 58.2 112 43.8
Peaxi162Scf00274g00005 Petunia axillaris HOM05D003021 ORTHO05D022173 2.0e-06 58.2 59 57.6
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 2.0e-06 58.2 56 58.9
C03p08120 Brassica napus HOM05D009950 ORTHO05D002235 2.7e-06 57.8 76 52.6
Dinv38770 Davidia involucrata HOM05D003021 ORTHO05D002235 2.7e-06 57.8 92 43.5
FAN13G0757 Fragaria x ananassa HOM05D003021 ORTHO05D002235 2.7e-06 57.8 97 43.3
CAN.G479.38 Capsicum annuum HOM05D003021 ORTHO05D022173 3.5e-06 57.4 63 55.6
Ca_21794_v3 Cicer arietinum L. HOM05D014856 ORTHO05D002235 3.5e-06 57.4 70 54.3
ECA232G0555 Erigeron canadensis HOM05D003021 ORTHO05D002235 3.5e-06 57.4 142 36.6
Hma1.2p1_1813F.1_g303770 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 3.5e-06 57.4 71 54.9
Hma1.2p1_3044F.1_g332070 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 3.5e-06 57.4 71 54.9
THA.LOC104802964 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 3.5e-06 57.4 62 58.1
Lalb_Chr08g0243541 Lupinus albus HOM05D013197 ORTHO05D012811 4.5e-06 57.0 83 50.6
CsaV3_1G005770 Cucumis sativus L. HOM05D003021 ORTHO05D002235 5.9e-06 56.6 109 39.4
Glyma.17G076200 Glycine max HOM05D014856 ORTHO05D002235 5.9e-06 56.6 119 41.2
MBI16_g15533_MAGBIO Magnolia biondii HOM05D003021 ORTHO05D002235 5.9e-06 56.6 63 58.7
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 5.9e-06 56.6 71 49.3
TPR.G1990 Trifolium pratense HOM05D014856 ORTHO05D002235 5.9e-06 56.6 93 46.2
A02p41540 Brassica napus HOM05D009040 ORTHO05D002235 7.7e-06 56.2 93 43.0
A03p07130 Brassica napus HOM05D009950 ORTHO05D002235 7.7e-06 56.2 77 50.6
CARHR197890 Cardamine hirsuta HOM05D009950 ORTHO05D002235 7.7e-06 56.2 115 40.0
FvH4_5g14370 Fragaria vesca HOM05D003021 ORTHO05D002235 7.7e-06 56.2 97 42.3
Nitab4.5_0002881g0010 Nicotiana tabacum HOM05D003021 ORTHO05D022173 7.7e-06 56.2 58 58.6
Nitab4.5_0003145g0060 Nicotiana tabacum HOM05D003021 ORTHO05D002235 7.7e-06 56.2 128 38.3
Rhsim12G0153000 Rhododendron simsii HOM05D003021 ORTHO05D002235 7.7e-06 56.2 110 41.8
Sc04g0002990 Simmondsia chinensis HOM05D003021 ORTHO05D002235 7.7e-06 56.2 95 42.1


User provided reference genes

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