Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40395 Nelumbo nucifera HOM05D001536 ORTHO05D001442 5.4e-71 270.8 127 100.0
Nn1g09175 Nelumbo nucifera HOM05D001536 ORTHO05D001442 2.7e-62 241.9 119 95.0
Nn4g23320 Nelumbo nucifera HOM05D001536 ORTHO05D001442 8.6e-61 236.9 119 93.3
Nn5g27508 Nelumbo nucifera HOM05D001536 ORTHO05D001442 2.9e-40 168.7 119 73.1
Nn3g17370 Nelumbo nucifera HOM05D001536 ORTHO05D001442 4.2e-31 138.3 129 58.1
TAR622G0794 Trochodendron aralioides HOM05D001536 ORTHO05D001442 8.2e-27 124.0 130 47.7
TAR371G0889 Trochodendron aralioides HOM05D001536 ORTHO05D001442 1.9e-23 112.8 127 47.2
TAR374G1508 Trochodendron aralioides HOM05D001536 ORTHO05D001442 2.7e-22 109.0 129 45.0
TAR629G1896 Trochodendron aralioides HOM05D001536 ORTHO05D001442 1.8e-21 106.3 121 47.1
Dinv34112 Davidia involucrata HOM05D001536 ORTHO05D001442 2.4e-18 95.9 133 40.6
Dinv33801 Davidia involucrata HOM05D001536 ORTHO05D001442 3.2e-15 85.5 130 36.9
Dinv16702 Davidia involucrata HOM05D001536 ORTHO05D001442 4.2e-15 85.1 132 36.4
Phvul.002G069600 Phaseolus vulgaris HOM05D001536 ORTHO05D001442 4.2e-15 85.1 127 40.2
Dinv11493 Davidia involucrata HOM05D001536 ORTHO05D001442 1.0e-13 80.5 129 35.7
CiPaw.05G128200 Carya illinoinensis HOM05D001536 ORTHO05D001442 1.4e-13 80.1 128 37.5
RcHm_v2.0_Chr4g0438891 Rosa chinensis HOM05D001536 ORTHO05D001442 2.3e-13 79.3 130 36.2
VMungo1215G2164 Vigna mungo HOM05D001536 ORTHO05D001442 3.0e-13 79.0 131 37.4
Glyma.07G227100 Glycine max HOM05D001536 ORTHO05D001442 5.1e-13 78.2 126 40.5
Lalb_Chr09g0329111 Lupinus albus HOM05D001536 ORTHO05D001442 1.9e-12 76.3 131 40.5
Lj4g0002221 Lotus japonicus HOM05D001536 ORTHO05D001442 2.5e-12 75.9 112 38.4
Atru.chr11.1694 Acer truncatum HOM05D001536 ORTHO05D001442 4.3e-12 75.1 127 42.5
Aqoxy3G03549 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 5.7e-12 74.7 119 34.5
CSS0003937 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 5.7e-12 74.7 131 33.6
CSS0012767 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 5.7e-12 74.7 131 33.6
Glyma.02G113300 Glycine max HOM05D001536 ORTHO05D001442 5.7e-12 74.7 118 36.4
Glyma.20G027500 Glycine max HOM05D001536 ORTHO05D001442 5.7e-12 74.7 128 39.8
CiPaw.06G089900 Carya illinoinensis HOM05D001536 ORTHO05D001442 7.4e-12 74.3 131 35.1
Thecc.02G336800 Theobroma cacao HOM05D001536 ORTHO05D001442 9.7e-12 73.9 113 37.2
FvH4_4g30520 Fragaria vesca HOM05D001536 ORTHO05D001442 1.3e-11 73.6 118 36.4
Lalb_Chr05g0220121 Lupinus albus HOM05D001536 ORTHO05D001442 1.3e-11 73.6 134 38.1
Medtr4g082510 Medicago truncatula HOM05D001536 ORTHO05D001442 1.7e-11 73.2 124 37.9
Actinidia12316 Actinidia chinensis HOM05D001536 ORTHO05D001442 2.2e-11 72.8 130 35.4
FAN07G0538 Fragaria x ananassa HOM05D001536 ORTHO05D001442 2.2e-11 72.8 117 35.9
Hma1.2p1_0354F.1_g133660 Hydrangea macrophylla HOM05D001536 ORTHO05D001442 2.8e-11 72.4 110 38.2
FAN17G0931 Fragaria x ananassa HOM05D001536 ORTHO05D001442 3.7e-11 72.0 119 35.3
Ciclev10030574m.g Citrus clementina HOM05D001536 ORTHO05D001442 4.8e-11 71.6 133 36.1
Manes.01G030700 Manihot esculenta HOM05D001536 ORTHO05D001442 6.3e-11 71.2 133 35.3
Lj2g0017216 Lotus japonicus HOM05D001536 ORTHO05D001442 8.2e-11 70.9 130 33.8
Lalb_Chr17g0340961 Lupinus albus HOM05D001536 ORTHO05D001442 1.4e-10 70.1 139 36.7
Haze_11937 Corylus avellana HOM05D001536 ORTHO05D001442 1.8e-10 69.7 128 35.9
Gohir.D05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 1.8e-10 69.7 115 38.3
CSS0031318 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 2.4e-10 69.3 121 34.7
CSS0031748 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 2.4e-10 69.3 121 34.7
Gohir.A05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.4e-10 69.3 115 38.3
Sabra10G0123100 Salix brachista HOM05D001536 ORTHO05D001442 2.4e-10 69.3 121 36.4
VMungo0251G0497 Vigna mungo HOM05D001536 ORTHO05D001442 2.4e-10 69.3 129 37.2
Gorai.009G325900 Gossypium raimondii HOM05D001536 ORTHO05D001442 3.1e-10 68.9 115 38.3
Psat7g134840 Pisum sativum HOM05D001536 ORTHO05D001442 3.1e-10 68.9 132 36.4
vmacro16367 Vaccinium macrocarpon HOM05D001536 ORTHO05D001442 3.1e-10 68.9 129 34.9
FAN12G2957 Fragaria x ananassa HOM05D001536 ORTHO05D001442 4.1e-10 68.6 118 34.7
Cfa008911 Carpinus fangiana HOM05D001536 ORTHO05D001442 5.3e-10 68.2 128 35.2
Ca_25949_v3 Cicer arietinum L. HOM05D001536 ORTHO05D001442 5.3e-10 68.2 128 34.4
Duzib248G0148 Durio zibethinus HOM05D001536 ORTHO05D001442 5.3e-10 68.2 117 41.9
COL.COLO4_27938 Corchorus olitorius HOM05D001536 ORTHO05D001442 6.9e-10 67.8 113 37.2
TPR.G34059 Trifolium pratense HOM05D001536 ORTHO05D001442 6.9e-10 67.8 126 36.5
Glyma.01G054800 Glycine max HOM05D001536 ORTHO05D001442 9.1e-10 67.4 115 31.3
MD16G1065200 Malus domestica HOM05D001536 ORTHO05D001442 9.1e-10 67.4 121 33.1
Gohir.D13G079500 Gossypium hirsutum HOM05D001536 ORTHO05D001442 1.5e-09 66.6 115 36.5
Duzib268G0567 Durio zibethinus HOM05D001536 ORTHO05D001442 2.0e-09 66.2 113 36.3
Manes.05G107500 Manihot esculenta HOM05D001536 ORTHO05D001442 2.0e-09 66.2 117 37.6
FAN22G0581 Fragaria x ananassa HOM05D001536 ORTHO05D001442 2.6e-09 65.9 120 34.2
Phvul.002G167700 Phaseolus vulgaris HOM05D001536 ORTHO05D001442 2.6e-09 65.9 127 36.2
Gohir.A13G079800 Gossypium hirsutum HOM05D001536 ORTHO05D001442 4.5e-09 65.1 115 36.5
Lalb_Chr10g0098571 Lupinus albus HOM05D001536 ORTHO05D001442 4.5e-09 65.1 122 32.8
PSO017G1876 Papaver somniferum HOM05D001536 ORTHO05D001442 7.7e-09 64.3 125 33.6
Duzib251G0780 Durio zibethinus HOM05D001536 ORTHO05D001442 1.3e-08 63.5 109 34.9
Gorai.013G090900 Gossypium raimondii HOM05D001536 ORTHO05D001442 1.3e-08 63.5 115 35.7
QL03p070806 Quercus lobata HOM05D001536 ORTHO05D001442 1.7e-08 63.2 128 34.4
Potri.008G092800 Populus trichocarpa HOM05D001536 ORTHO05D001442 5.0e-08 61.6 134 36.6
Lj3C1032T12 Lonicera japonica HOM05D001536 ORTHO05D001442 6.5e-08 61.2 115 33.0
Potri.010G162000 Populus trichocarpa HOM05D001536 ORTHO05D001442 6.5e-08 61.2 113 36.3
Prupe.1G281700 Prunus persica HOM05D001536 ORTHO05D001442 8.5e-08 60.8 130 31.5
EL10Ac6g14955 Beta vulgaris HOM05D001536 ORTHO05D001442 1.4e-07 60.1 111 36.0
arahy.Tifrunner.gnm1.ann1.BZ8U3A Arachis hypogaea HOM05D001536 ORTHO05D001442 2.5e-07 59.3 128 29.7
DCAR_030980 Daucus carota HOM05D001536 ORTHO05D001442 2.5e-07 59.3 122 31.1
Gohir.A12G162600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 5.5e-07 58.2 113 31.9
PSO478G3214 Papaver somniferum HOM05D001536 ORTHO05D001442 5.5e-07 58.2 112 33.9
AUR62007958 Chenopodium quinoa HOM05D001536 ORTHO05D001442 9.4e-07 57.4 111 35.1
Potri.017G088900 Populus trichocarpa HOM05D001536 ORTHO05D001442 9.4e-07 57.4 131 30.5
arahy.Tifrunner.gnm1.ann1.ULDL2L Arachis hypogaea HOM05D001536 ORTHO05D001442 1.2e-06 57.0 129 29.5
Gorai.008G178300 Gossypium raimondii HOM05D001536 ORTHO05D001442 1.2e-06 57.0 113 31.9
AUR62003138 Chenopodium quinoa HOM05D001536 ORTHO05D001442 2.1e-06 56.2 111 36.9
Gohir.D12G165600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.1e-06 56.2 113 32.7
Potri.004G125900 Populus trichocarpa HOM05D001536 ORTHO05D001442 2.1e-06 56.2 130 30.0
ClCG05G023880 Citrullus lanatus HOM05D001536 ORTHO05D001442 2.7e-06 55.8 110 32.7
Nitab4.5_0000014g0250 Nicotiana tabacum HOM05D001536 ORTHO05D001442 2.7e-06 55.8 136 29.4
CANSAT64G3017 Cannabis sativa HOM05D001536 ORTHO05D001442 4.7e-06 55.1 107 34.6
Cc11_g12410 Coffea canephora HOM05D001536 ORTHO05D001442 7.9e-06 54.3 114 36.0


User provided reference genes

Program Settings