Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 3.4e-59 231.5 120 100.0
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 1.7e-29 132.9 126 59.5
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 2.4e-28 129.0 119 58.8
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 5.3e-28 127.9 119 57.1
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 5.3e-28 127.9 122 58.2
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 7.0e-28 127.5 125 59.2
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 9.1e-28 127.1 118 59.3
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.6e-27 126.3 119 58.0
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 1.7e-26 122.9 120 57.5
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 6.5e-26 120.9 119 55.5
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 1.9e-25 119.4 122 54.9
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 3.2e-25 118.6 100 59.0
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 3.2e-25 118.6 119 51.3
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 1.6e-24 116.3 124 55.6
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 2.1e-24 115.9 122 54.1
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 6.1e-24 114.4 114 55.3
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 6.1e-24 114.4 119 52.9
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 8.0e-24 114.0 100 57.0
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 1.0e-23 113.6 100 57.0
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.8e-23 112.8 107 57.0
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 4.0e-23 111.7 85 62.4
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 5.2e-23 111.3 119 49.6
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 6.7e-23 110.9 119 51.3
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 1.2e-22 110.2 123 49.6
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 2.0e-22 109.4 93 62.4
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 2.6e-22 109.0 115 55.7
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 2.6e-22 109.0 93 62.4
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 3.3e-22 108.6 123 51.2
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 3.3e-22 108.6 105 58.1
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 3.3e-22 108.6 122 53.3
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 4.4e-22 108.2 107 57.0
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 7.5e-22 107.5 112 52.7
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 9.7e-22 107.1 122 53.3
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 9.7e-22 107.1 105 57.1
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.3e-21 106.7 122 52.5
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 1.7e-21 106.3 112 53.6
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 1.7e-21 106.3 123 55.3
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 2.8e-21 105.5 127 52.0
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 3.7e-21 105.1 107 55.1
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.1e-20 103.6 122 51.6
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.1e-20 103.6 89 61.8
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 1.4e-20 103.2 126 46.8
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 1.8e-20 102.8 107 59.8
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 1.8e-20 102.8 86 59.3
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 3.1e-20 102.1 86 58.1
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 3.1e-20 102.1 86 58.1
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 4.1e-20 101.7 85 58.8
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 4.1e-20 101.7 98 60.2
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 9.1e-20 100.5 122 52.5
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 1.2e-19 100.1 130 46.9
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 1.2e-19 100.1 125 45.6
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 1.6e-19 99.8 86 55.8
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 1.6e-19 99.8 86 55.8
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 2.7e-19 99.0 86 58.1
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 2.7e-19 99.0 120 45.8
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 3.5e-19 98.6 86 57.0
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 4.5e-19 98.2 86 57.0
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 4.5e-19 98.2 86 57.0
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 1.7e-18 96.3 81 59.3
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 2.2e-18 95.9 95 50.5
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 2.9e-18 95.5 77 61.0
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 2.9e-18 95.5 86 58.1
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 3.8e-18 95.1 86 55.8
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 3.8e-18 95.1 78 55.1
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 3.8e-18 95.1 93 49.5
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 5.0e-18 94.7 83 57.8
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 5.0e-18 94.7 130 43.8
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 8.5e-18 94.0 100 51.0
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 1.1e-17 93.6 86 51.2
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 1.5e-17 93.2 97 52.6
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 1.9e-17 92.8 84 54.8
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 2.5e-17 92.4 115 49.6
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 2.5e-17 92.4 123 43.9
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 7.2e-17 90.9 104 45.2
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 2.1e-16 89.4 122 43.4
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 2.1e-16 89.4 119 42.0
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 2.7e-16 89.0 124 43.5
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 4.7e-16 88.2 100 50.0
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 8.0e-16 87.4 70 57.1
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 8.0e-16 87.4 111 44.1
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 8.0e-16 87.4 126 42.1
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 1.8e-15 86.3 79 51.9
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 1.8e-15 86.3 79 51.9
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 3.0e-15 85.5 93 48.4
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 1.2e-14 83.6 68 57.4
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 4.4e-14 81.6 60 68.3
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 7.5e-14 80.9 56 69.6
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 7.5e-14 80.9 61 65.6
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 7.5e-14 80.9 166 32.5
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 9.8e-14 80.5 111 41.4
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 1.6e-11 73.2 62 59.7
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.0e-10 70.5 77 50.6
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 2.3e-10 69.3 78 50.0
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.9e-10 68.9 77 48.1
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.0e-10 68.2 77 49.4
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.6e-10 67.8 77 48.1
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.5e-09 65.9 77 46.8
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.3e-09 65.5 77 46.8
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.2e-09 65.1 76 47.4
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.6e-08 62.0 77 45.5
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.6e-08 62.0 107 37.4
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.1e-08 61.2 72 47.2
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 2.0e-06 56.2 79 43.0
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.5e-06 54.3 69 46.4
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 9.8e-06 53.9 85 35.3


User provided reference genes

Program Settings