Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 3.8e-58 228.0 120 100.0
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 5.0e-42 174.5 120 76.7
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 6.1e-40 167.5 118 71.2
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 2.3e-39 165.6 118 72.0
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 5.1e-39 164.5 118 68.6
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.6e-38 162.2 116 69.8
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.3e-38 161.8 116 69.0
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 5.7e-38 161.0 116 69.8
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 7.4e-38 160.6 116 69.0
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 9.7e-38 160.2 116 70.7
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.7e-37 159.5 125 69.6
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 2.2e-37 159.1 122 67.2
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 3.7e-37 158.3 116 69.8
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 4.8e-37 157.9 116 69.8
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 4.8e-37 157.9 122 66.4
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 8.2e-37 157.1 115 73.9
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 8.2e-37 157.1 120 69.2
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.8e-36 156.0 122 66.4
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 7.0e-36 154.1 123 67.5
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 7.0e-36 154.1 102 78.4
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 9.1e-36 153.7 124 70.2
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 1.2e-35 153.3 116 69.0
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 7.7e-35 150.6 121 67.8
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.7e-34 149.4 118 66.1
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 2.2e-34 149.1 122 63.9
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.4e-33 146.4 120 66.7
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.4e-33 146.4 120 63.3
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 2.5e-33 145.6 122 62.3
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 4.2e-33 144.8 120 65.0
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 1.6e-32 142.9 124 61.3
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.6e-32 142.9 121 65.3
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.6e-32 142.9 122 63.1
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 2.7e-32 142.1 123 64.2
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 2.7e-32 142.1 115 64.3
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 3.6e-32 141.7 119 65.5
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 6.1e-32 141.0 122 66.4
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 8.0e-32 140.6 121 62.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 8.0e-32 140.6 121 64.5
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 8.0e-32 140.6 121 64.5
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 8.0e-32 140.6 121 64.5
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 1.8e-31 139.4 100 72.0
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 2.3e-31 139.0 120 64.2
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 3.9e-31 138.3 121 62.8
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 6.7e-31 137.5 123 62.6
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 8.8e-31 137.1 118 62.7
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 8.8e-31 137.1 111 63.1
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 8.8e-31 137.1 116 62.1
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.5e-30 136.3 123 62.6
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 2.0e-30 136.0 124 60.5
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.0e-30 136.0 122 63.9
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 3.3e-30 135.2 124 62.1
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 5.7e-30 134.4 117 61.5
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 7.4e-30 134.0 120 60.0
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 9.7e-30 133.7 117 60.7
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.3e-29 133.3 118 61.0
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 1.7e-29 132.9 116 60.3
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.7e-29 132.9 120 60.0
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 2.2e-29 132.5 122 64.8
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.2e-29 132.5 111 60.4
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 2.8e-29 132.1 124 62.1
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 2.8e-29 132.1 123 61.8
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 4.8e-29 131.3 123 59.3
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 4.8e-29 131.3 120 59.2
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 6.3e-29 131.0 120 60.8
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.4e-28 129.8 122 59.8
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 1.8e-28 129.4 122 59.0
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 4.1e-28 128.3 119 59.7
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 5.3e-28 127.9 120 61.7
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 7.0e-28 127.5 126 60.3
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 7.0e-28 127.5 120 60.0
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 1.2e-27 126.7 125 62.4
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.6e-27 126.3 118 61.0
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 4.5e-27 124.8 119 60.5
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 5.9e-27 124.4 139 52.5
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 5.9e-27 124.4 121 57.0
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.9e-26 122.1 116 57.8
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 8.5e-26 120.6 67 88.1
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 8.5e-26 120.6 120 59.2
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 1.9e-25 119.4 119 55.5
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 4.2e-25 118.2 117 57.3
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 1.6e-24 116.3 105 63.8
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.6e-24 116.3 68 79.4
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 4.7e-24 114.8 108 59.3
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 8.0e-24 114.0 105 61.9
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 1.0e-23 113.6 120 55.8
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.5e-22 109.8 120 54.2
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 1.5e-22 109.8 98 62.2
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 1.5e-22 109.8 120 55.8
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 2.0e-22 109.4 113 53.1
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 3.3e-22 108.6 117 51.3
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 3.3e-22 108.6 108 59.3
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 4.4e-22 108.2 109 63.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 4.4e-22 108.2 108 58.3
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 9.7e-22 107.1 124 53.2
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 6.3e-21 104.4 118 54.2
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 6.3e-21 104.4 74 68.9
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.8e-20 102.8 123 50.4
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 2.4e-20 102.4 115 51.3
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 9.1e-20 100.5 66 74.2
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 1.6e-19 99.8 104 54.8
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 5.9e-19 97.8 120 50.8
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 7.7e-19 97.4 78 65.4
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.0e-18 97.1 72 65.3
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.7e-18 96.3 78 64.1
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 5.0e-18 94.7 101 57.4
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 1.9e-17 92.8 116 49.1
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 2.1e-16 89.4 120 44.2
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.0e-15 87.0 86 53.5
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 8.8e-15 84.0 115 49.6
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.6e-14 82.4 86 52.3
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 2.8e-13 79.0 83 50.6
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 4.1e-12 75.1 83 55.4
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 9.1e-12 73.9 69 55.1
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 2.0e-11 72.8 115 39.1
CiPaw.09G207700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.2e-08 63.5 121 42.1
SEGI_16463 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.5e-06 56.6 54 55.6


User provided reference genes

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