Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g40034 Nelumbo nucifera HOM05D000510 ORTHO05D001548 3.3e-49 198.0 93 100.0
Nn2g13134 Nelumbo nucifera HOM05D000510 ORTHO05D001548 8.6e-34 146.7 77 88.3
TAR633G0849 Trochodendron aralioides HOM05D000510 ORTHO05D001548 3.9e-18 94.7 81 54.3
TAR636G2718 Trochodendron aralioides HOM05D000510 ORTHO05D001548 5.1e-18 94.4 81 55.6
GSVIVG01032816001 Vitis vinifera HOM05D000510 ORTHO05D001548 6.6e-18 94.0 81 51.9
TAR623G1138 Trochodendron aralioides HOM05D000510 ORTHO05D001548 1.5e-17 92.8 81 54.3
Gohir.D08G013100 Gossypium hirsutum HOM05D000510 ORTHO05D001548 1.9e-17 92.4 82 52.4
PSO801G0713 Papaver somniferum HOM05D000510 ORTHO05D001548 2.5e-17 92.0 82 48.8
PSO339G4008 Papaver somniferum HOM05D000510 ORTHO05D001548 1.6e-16 89.4 82 48.8
Gohir.A08G002400 Gossypium hirsutum HOM05D000510 ORTHO05D001548 2.8e-16 88.6 82 51.2
Gorai.004G007200 Gossypium raimondii HOM05D000510 ORTHO05D001548 2.8e-16 88.6 82 51.2
Manes.01G160900 Manihot esculenta HOM05D000510 ORTHO05D001548 1.4e-15 86.3 84 45.2
Duzib170G0371 Durio zibethinus HOM05D000510 ORTHO05D001548 4.0e-15 84.7 78 50.0
TWI79G1160 Tripterygium wilfordii HOM05D000510 ORTHO05D001548 5.2e-15 84.3 84 47.6
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 8.9e-15 83.6 84 47.6
QL01p038489 Quercus lobata HOM05D000510 ORTHO05D001548 8.9e-15 83.6 78 51.3
Cfa001316 Carpinus fangiana HOM05D000510 ORTHO05D001548 1.5e-14 82.8 77 54.5
MBI15_g13380_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D001548 2.0e-14 82.4 81 50.6
PGR102G2382 Punica granatum HOM05D000510 ORTHO05D001548 2.0e-14 82.4 79 49.4
Cpa.g.sc112.9 Carica papaya HOM05D000510 ORTHO05D001548 2.6e-14 82.0 81 46.9
Cfa011704 Carpinus fangiana HOM05D000510 ORTHO05D001548 2.6e-14 82.0 80 50.0
Potri.001G252400 Populus trichocarpa HOM05D000510 ORTHO05D001548 2.6e-14 82.0 84 44.0
Manes.07G129800 Manihot esculenta HOM05D000510 ORTHO05D001548 3.4e-14 81.6 84 46.4
CiPaw.01G298800 Carya illinoinensis HOM05D000510 ORTHO05D001548 4.4e-14 81.3 75 53.3
Haze_17228 Corylus avellana HOM05D000510 ORTHO05D001548 5.8e-14 80.9 78 50.0
GSVIVG01024731001 Vitis vinifera HOM05D000510 ORTHO05D001548 5.8e-14 80.9 79 49.4
Duzib168G1958 Durio zibethinus HOM05D000510 ORTHO05D001548 7.6e-14 80.5 82 46.3
FAN03G2243 Fragaria x ananassa HOM05D000510 ORTHO05D001548 7.6e-14 80.5 82 42.7
Sabra09G0034000 Salix brachista HOM05D000510 ORTHO05D001548 7.6e-14 80.5 84 44.0
CiPaw.13G076800 Carya illinoinensis HOM05D000510 ORTHO05D001548 9.9e-14 80.1 80 48.8
FAN10G3043 Fragaria x ananassa HOM05D000510 ORTHO05D001548 9.9e-14 80.1 82 42.7
Hma1.2p1_0962F.1_g241840 Hydrangea macrophylla HOM05D000510 ORTHO05D001548 9.9e-14 80.1 81 46.9
Lalb_Chr08g0231691 Lupinus albus HOM05D000510 ORTHO05D001548 1.3e-13 79.7 82 47.6
Nn2g10844 Nelumbo nucifera HOM05D000510 ORTHO05D001548 1.3e-13 79.7 81 48.1
Glyma.11G230600 Glycine max HOM05D000510 ORTHO05D001548 1.7e-13 79.3 81 43.2
CANSAT56G3007 Cannabis sativa HOM05D000510 ORTHO05D001548 2.9e-13 78.6 81 42.0
Lj6g0000739 Lotus japonicus HOM05D000510 ORTHO05D001548 3.8e-13 78.2 81 43.2
Prupe.2G250300 Prunus persica HOM05D000510 ORTHO05D001548 3.8e-13 78.2 83 45.8
Cpa.g.sc19.172 Carica papaya HOM05D000510 ORTHO05D001548 4.9e-13 77.8 81 44.4
FAN01G1576 Fragaria x ananassa HOM05D000510 ORTHO05D001548 6.4e-13 77.4 82 41.5
Lj6g0003163 Lotus japonicus HOM05D000510 ORTHO05D001548 6.4e-13 77.4 80 50.0
Psat5g128240 Pisum sativum HOM05D000510 ORTHO05D001548 6.4e-13 77.4 81 43.2
Sc21g0006370 Simmondsia chinensis HOM05D000510 ORTHO05D001548 6.4e-13 77.4 83 43.4
MD00G1166500 Malus domestica HOM05D000510 ORTHO05D001548 1.1e-12 76.6 82 43.9
Ciclev10029951m.g Citrus clementina HOM05D000510 ORTHO05D001548 1.4e-12 76.3 88 44.3
Lalb_Chr04g0250591 Lupinus albus HOM05D000510 ORTHO05D001548 1.4e-12 76.3 81 44.4
arahy.Tifrunner.gnm1.ann1.1NSR5U Arachis hypogaea HOM05D000510 ORTHO05D001548 1.9e-12 75.9 85 47.1
Sabra08G0050400 Salix brachista HOM05D000510 ORTHO05D001548 1.9e-12 75.9 88 42.0
arahy.Tifrunner.gnm1.ann1.105KNS Arachis hypogaea HOM05D000510 ORTHO05D001548 2.4e-12 75.5 85 47.1
Medtr3g464080 Medicago truncatula HOM05D000510 ORTHO05D001548 3.2e-12 75.1 84 48.8
QL08p063220 Quercus lobata HOM05D000510 ORTHO05D001548 3.2e-12 75.1 78 48.7
THA.LOC104824316 Tarenaya hassleriana HOM05D000510 ORTHO05D001548 3.2e-12 75.1 81 44.4
TWI73G1035 Tripterygium wilfordii HOM05D000510 ORTHO05D001548 3.2e-12 75.1 82 46.3
Manes.10G012100 Manihot esculenta HOM05D000510 ORTHO05D001548 4.2e-12 74.7 88 39.8
AUR62001637 Chenopodium quinoa HOM05D000510 ORTHO05D001548 5.4e-12 74.3 86 44.2
Cc02_g06490 Coffea canephora HOM05D000510 ORTHO05D001548 5.4e-12 74.3 86 38.4
Dinv28647 Davidia involucrata HOM05D000510 ORTHO05D001548 5.4e-12 74.3 81 44.4
TWI09G0635 Tripterygium wilfordii HOM05D000510 ORTHO05D001548 5.4e-12 74.3 82 46.3
CiPaw.14G058900 Carya illinoinensis HOM05D000510 ORTHO05D001548 7.1e-12 73.9 84 42.9
AUR62020143 Chenopodium quinoa HOM05D000510 ORTHO05D001548 7.1e-12 73.9 86 45.3
Lalb_Chr17g0346791 Lupinus albus HOM05D000510 ORTHO05D001548 7.1e-12 73.9 81 40.7
Medtr3g070800 Medicago truncatula HOM05D000510 ORTHO05D001548 7.1e-12 73.9 81 43.2
RcHm_v2.0_Chr1g0370251 Rosa chinensis HOM05D000510 ORTHO05D001548 9.3e-12 73.6 82 40.2
Aa31LG10G10880 Aethionema arabicum HOM05D000510 ORTHO05D001548 1.2e-11 73.2 81 35.8
CiPaw.02G192500 Carya illinoinensis HOM05D000510 ORTHO05D001548 1.2e-11 73.2 78 47.4
Glyma.02G257300 Glycine max HOM05D000510 ORTHO05D001548 1.2e-11 73.2 81 40.7
Phvul.001G243800 Phaseolus vulgaris HOM05D000510 ORTHO05D001548 1.2e-11 73.2 84 41.7
SHI03427 Sapria himalayana HOM05D000510 ORTHO05D001548 1.2e-11 73.2 90 40.0
arahy.Tifrunner.gnm1.ann1.00QF5S Arachis hypogaea HOM05D000510 ORTHO05D001548 1.6e-11 72.8 83 41.0
Ciclev10030732m.g Citrus clementina HOM05D000510 ORTHO05D001548 1.6e-11 72.8 82 46.3
LjContig00357g0027901 Lotus japonicus HOM05D000510 ORTHO05D001548 1.6e-11 72.8 81 43.2
Potri.008G068700 Populus trichocarpa HOM05D000510 ORTHO05D001548 1.6e-11 72.8 88 40.9
Potri.010G188600 Populus trichocarpa HOM05D000510 ORTHO05D001548 2.1e-11 72.4 88 40.9
QL05p072717 Quercus lobata HOM05D000510 ORTHO05D001548 2.1e-11 72.4 79 45.6
PSO384G2585 Papaver somniferum HOM05D000510 ORTHO05D001548 4.6e-11 71.2 86 40.7
VMungo1383G1553 Vigna mungo HOM05D000510 ORTHO05D001548 4.6e-11 71.2 84 41.7
Lalb_Chr15g0082921 Lupinus albus HOM05D000510 ORTHO05D001548 6.0e-11 70.9 86 45.3
Phvul.008G223900 Phaseolus vulgaris HOM05D000510 ORTHO05D001548 6.0e-11 70.9 77 42.9
Rhsim13G0068900 Rhododendron simsii HOM05D000510 ORTHO05D001548 6.0e-11 70.9 81 42.0
Sabra10G0145300 Salix brachista HOM05D000510 ORTHO05D001548 6.0e-11 70.9 88 40.9
Hund20992 Selenicereus undatus HOM05D000510 ORTHO05D001548 6.0e-11 70.9 85 41.2
Atru.chr12.38 Acer truncatum HOM05D000510 ORTHO05D001548 7.8e-11 70.5 82 41.5
Lalb_Chr10g0105151 Lupinus albus HOM05D000510 ORTHO05D001548 7.8e-11 70.5 81 39.5
Rhsim13G0068600 Rhododendron simsii HOM05D000510 ORTHO05D001548 7.8e-11 70.5 81 42.0
TPR.G38365 Trifolium pratense HOM05D000510 ORTHO05D001548 7.8e-11 70.5 86 44.2
MELO3C020544.2 Cucumis melo HOM05D000510 ORTHO05D001548 1.0e-10 70.1 79 46.8
Cc01_g14280 Coffea canephora HOM05D000510 ORTHO05D001548 1.3e-10 69.7 81 43.2
Peaxi162Scf00825g00231 Petunia axillaris HOM05D000510 ORTHO05D001548 1.3e-10 69.7 85 37.6
Prupe.6G056600 Prunus persica HOM05D000510 ORTHO05D001548 1.3e-10 69.7 80 43.8
vmacro02955 Vaccinium macrocarpon HOM05D000510 ORTHO05D001548 1.3e-10 69.7 82 42.7
CAN.G1158.3 Capsicum annuum HOM05D000510 ORTHO05D001548 1.7e-10 69.3 83 41.0
MELO3C025195.2 Cucumis melo HOM05D000510 ORTHO05D001548 1.7e-10 69.3 82 42.7
CsaV3_1G036220 Cucumis sativus L. HOM05D000510 ORTHO05D001548 1.7e-10 69.3 79 45.6
Eucgr.J00204 Eucalyptus grandis HOM05D000510 ORTHO05D001548 1.7e-10 69.3 81 42.0
MD01G1153100 Malus domestica HOM05D000510 ORTHO05D001548 1.7e-10 69.3 78 44.9
PGR142G1494 Punica granatum HOM05D000510 ORTHO05D001548 1.7e-10 69.3 62 51.6
Dinv17996 Davidia involucrata HOM05D000510 ORTHO05D001548 2.3e-10 68.9 82 35.4
MD11G1073300 Malus domestica HOM05D000510 ORTHO05D001548 2.3e-10 68.9 81 43.2
VMungo0647G0707 Vigna mungo HOM05D000510 ORTHO05D001548 2.3e-10 68.9 77 42.9
CSS0010972 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D001548 3.0e-10 68.6 82 40.2
Sabra16G0153600 Salix brachista HOM05D000510 ORTHO05D001548 3.0e-10 68.6 76 39.5
Aqoxy4G02551 Aquilegia oxysepala HOM05D000510 ORTHO05D001548 3.9e-10 68.2 81 44.4
Eucgr.G03061 Eucalyptus grandis HOM05D000510 ORTHO05D001548 3.9e-10 68.2 71 46.5
VMungo0540G1846 Vigna mungo HOM05D000510 ORTHO05D001548 3.9e-10 68.2 84 46.4
EL10Ac7g16179 Beta vulgaris HOM05D000510 ORTHO05D001548 5.1e-10 67.8 86 43.0
CsaV3_5G010140 Cucumis sativus L. HOM05D000510 ORTHO05D001548 5.1e-10 67.8 82 40.2
PSO339G6721 Papaver somniferum HOM05D000510 ORTHO05D001548 5.1e-10 67.8 86 39.5
Lj1C955G19 Lonicera japonica HOM05D000510 ORTHO05D001548 6.6e-10 67.4 86 37.2
MD03G1068800 Malus domestica HOM05D000510 ORTHO05D001548 6.6e-10 67.4 80 42.5
Actinidia13938 Actinidia chinensis HOM05D000510 ORTHO05D001548 8.7e-10 67.0 84 40.5
ClCG03G000720 Citrullus lanatus HOM05D000510 ORTHO05D001548 8.7e-10 67.0 80 45.0
Phvul.006G068400 Phaseolus vulgaris HOM05D000510 ORTHO05D001548 8.7e-10 67.0 84 47.6
vmacro10041 Vaccinium macrocarpon HOM05D000510 ORTHO05D001548 8.7e-10 67.0 80 42.5
Ca_05960_v3 Cicer arietinum L. HOM05D000510 ORTHO05D001548 1.5e-09 66.2 89 41.6
Rhsim09G0177200 Rhododendron simsii HOM05D000510 ORTHO05D001548 1.5e-09 66.2 80 43.8
Ah.08g221300 Amaranthus hybridus HOM05D000510 ORTHO05D001548 1.9e-09 65.9 86 38.4
Ca_14941_v3 Cicer arietinum L. HOM05D000510 ORTHO05D001548 2.5e-09 65.5 81 42.0
Ca_15128_v3 Cicer arietinum L. HOM05D000510 ORTHO05D001548 2.5e-09 65.5 75 41.3
Nitab4.5_0000666g0070 Nicotiana tabacum HOM05D000510 ORTHO05D001548 3.3e-09 65.1 85 35.3
ATR0681G251 Amborella trichopoda HOM05D000510 ORTHO05D001548 4.3e-09 64.7 77 44.2
ClCG07G004190 Citrullus lanatus HOM05D000510 ORTHO05D001548 4.3e-09 64.7 82 39.0
FAN16G1596 Fragaria x ananassa HOM05D000510 ORTHO05D001548 4.3e-09 64.7 77 44.2
Gohir.D13G016400 Gossypium hirsutum HOM05D000510 ORTHO05D001548 4.3e-09 64.7 87 41.4
Medtr5g082630 Medicago truncatula HOM05D000510 ORTHO05D001548 4.3e-09 64.7 88 40.9
Nitab4.5_0001032g0020 Nicotiana tabacum HOM05D000510 ORTHO05D001548 4.3e-09 64.7 85 35.3
Dinv03106 Davidia involucrata HOM05D000510 ORTHO05D001548 5.6e-09 64.3 81 40.7
Glyma.18G026700 Glycine max HOM05D000510 ORTHO05D001548 5.6e-09 64.3 81 37.0
CDE06G0783 Ceratophyllum demersum HOM05D000510 ORTHO05D001548 7.3e-09 63.9 73 46.6
Gohir.D10G248300 Gossypium hirsutum HOM05D000510 ORTHO05D001548 7.3e-09 63.9 83 41.0
Gorai.013G018100 Gossypium raimondii HOM05D000510 ORTHO05D001548 7.3e-09 63.9 88 40.9
FAN25G0552 Fragaria x ananassa HOM05D000510 ORTHO05D001548 1.3e-08 63.2 77 44.2
TAR636G3361 Trochodendron aralioides HOM05D000510 ORTHO05D001548 1.3e-08 63.2 82 41.5
FvH4_3g38710 Fragaria vesca HOM05D000510 ORTHO05D001548 1.6e-08 62.8 77 42.9
FAN11G3053 Fragaria x ananassa HOM05D000510 ORTHO05D001548 1.6e-08 62.8 77 42.9
Oeu005843.1 Olea europaea HOM05D000510 ORTHO05D001548 2.1e-08 62.4 84 38.1
RcHm_v2.0_Chr5g0069861 Rosa chinensis HOM05D000510 ORTHO05D001548 2.1e-08 62.4 76 46.1
Duzib114G0278 Durio zibethinus HOM05D000510 ORTHO05D001548 2.8e-08 62.0 87 41.4
Gohir.A13G015200 Gossypium hirsutum HOM05D000510 ORTHO05D001548 2.8e-08 62.0 91 39.6
Sed0022189 Sechium edule HOM05D000510 ORTHO05D001548 2.8e-08 62.0 78 44.9
HPP92_006758 Vanilla planifolia HOM05D000510 ORTHO05D001548 2.8e-08 62.0 81 43.2
Glyma.18G062500 Glycine max HOM05D000510 ORTHO05D001548 3.6e-08 61.6 85 42.4
Peaxi162Scf00957g00331 Petunia axillaris HOM05D000510 ORTHO05D001548 3.6e-08 61.6 83 37.3
Gorai.011G288100 Gossypium raimondii HOM05D000510 ORTHO05D001548 4.8e-08 61.2 83 39.8
Duzib128G0662 Durio zibethinus HOM05D000510 ORTHO05D001548 6.2e-08 60.8 87 39.1
TPR.G21180 Trifolium pratense HOM05D000510 ORTHO05D001548 6.2e-08 60.8 84 42.9
CANSAT54G2508 Cannabis sativa HOM05D000510 ORTHO05D001548 1.1e-07 60.1 90 37.8
Lj1C136T3 Lonicera japonica HOM05D000510 ORTHO05D001548 1.8e-07 59.3 74 44.6
Glyma.11G174800 Glycine max HOM05D000510 ORTHO05D001548 3.1e-07 58.5 84 40.5
MSTRG.27333 Avicennia marina HOM05D000510 ORTHO05D001548 4.0e-07 58.2 84 36.9
SGA_v2.0_scaffold78G25446 Striga asiatica HOM05D000510 ORTHO05D001548 5.3e-07 57.8 84 36.9
HPP92_025092 Vanilla planifolia HOM05D000510 ORTHO05D001548 5.3e-07 57.8 81 39.5
CSS0027972 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D001548 1.2e-06 56.6 58 46.6
DCAR_024823 Daucus carota HOM05D000510 ORTHO05D001548 1.5e-06 56.2 61 42.6
Migut.F00684 Erythranthe guttata HOM05D000510 ORTHO05D001548 1.5e-06 56.2 84 38.1
PGSC0003DMG400027124 Solanum tuberosum HOM05D000510 ORTHO05D001548 2.0e-06 55.8 83 32.5
MSTRG.8330 Avicennia marina HOM05D000510 ORTHO05D001548 2.6e-06 55.5 82 35.4
Dinv10621 Davidia involucrata HOM05D000510 ORTHO05D001548 2.6e-06 55.5 81 33.3
SalBow6G5662 Salvia bowleyana HOM05D000510 ORTHO05D001548 2.6e-06 55.5 88 36.4
Oeu028343.1 Olea europaea HOM05D000510 ORTHO05D001548 5.8e-06 54.3 87 33.3
AUR62012253 Chenopodium quinoa HOM05D000510 ORTHO05D001548 7.6e-06 53.9 82 35.4


User provided reference genes

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