Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39983 Nelumbo nucifera HOM05D000876 ORTHO05D000285 2.7e-133 478.8 262 100.0
Ah.03g141330 Amaranthus hybridus HOM05D000876 ORTHO05D000285 1.7e-15 87.4 251 28.3
Aqoxy4G02707 Aquilegia oxysepala HOM05D000876 ORTHO05D000285 3.0e-15 86.7 236 28.0
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 3.0e-15 86.7 261 28.0
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 3.9e-15 86.3 251 28.3
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 1.5e-14 84.3 246 27.2
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 1.5e-14 84.3 246 27.2
TWI38G1581 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.9e-14 84.0 243 27.6
TWI53G2118 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.9e-14 84.0 248 26.2
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 1.3e-13 81.3 261 26.8
TWI38G0708 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.6e-13 80.9 256 27.0
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 2.8e-13 80.1 248 27.0
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 4.8e-13 79.3 238 24.8
TWI38G1661 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.8e-13 79.3 256 27.0
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 6.2e-13 79.0 261 26.4
TWI23G0996 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.1e-12 78.2 247 26.3
TWI34G1578 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.1e-12 78.2 247 26.3
TWI75G1494 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.4e-12 77.0 247 25.1
TWI09G1617 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.0e-12 76.3 244 25.8
TAR636G1415 Trochodendron aralioides HOM05D011286 ORTHO05D000285 4.0e-12 76.3 240 25.8
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 6.9e-12 75.5 253 26.1
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 9.0e-12 75.1 239 31.8
arahy.Tifrunner.gnm1.ann1.2911W9 Arachis hypogaea HOM05D000876 ORTHO05D000285 1.2e-11 74.7 239 27.6
Duzib177G0996 Durio zibethinus HOM05D000876 ORTHO05D000285 1.2e-11 74.7 244 26.6
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 3.4e-11 73.2 252 23.8
Peaxi162Scf00002g02220 Petunia axillaris HOM05D000876 ORTHO05D000285 3.4e-11 73.2 250 24.4
Hund08681 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.4e-11 73.2 239 25.5
Hund30880 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.4e-11 73.2 230 25.2
GSVIVG01016378001 Vitis vinifera HOM05D000876 ORTHO05D000285 3.4e-11 73.2 237 24.9
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 4.4e-11 72.8 261 25.7
Lj1g0019277 Lotus japonicus HOM05D000876 ORTHO05D000285 5.8e-11 72.4 237 24.5
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 5.8e-11 72.4 241 27.8
TWI31G1090 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 5.8e-11 72.4 248 25.0
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 7.6e-11 72.0 239 31.4
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 7.6e-11 72.0 246 24.8
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 9.9e-11 71.6 239 27.6
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-10 71.2 238 29.0
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 1.3e-10 71.2 247 26.3
Oeu051245.1 Olea europaea HOM05D000876 ORTHO05D000285 1.7e-10 70.9 233 24.9
DCAR_020231 Daucus carota HOM05D000876 ORTHO05D000285 2.2e-10 70.5 250 24.8
TWI56G0298 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.9e-10 70.1 260 24.2
TWI60G0714 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.9e-10 70.1 248 24.6
arahy.Tifrunner.gnm1.ann1.R6BV2D Arachis hypogaea HOM05D000876 ORTHO05D000285 3.8e-10 69.7 239 26.8
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 3.8e-10 69.7 240 33.3
arahy.Tifrunner.gnm1.ann1.T11VTH Arachis hypogaea HOM05D000034 ORTHO05D000037 6.4e-10 68.9 258 24.4
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 6.4e-10 68.9 254 23.6
Gorai.007G284700 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.4e-10 68.6 244 26.2
CSS0021579 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.1e-09 68.2 250 22.8
TWI39G0385 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.4e-09 67.8 258 23.6
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.2e-09 66.6 237 32.9
Glyma.06G250600 Glycine max HOM05D000876 ORTHO05D000285 3.2e-09 66.6 57 50.9
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 4.2e-09 66.2 239 30.1
Carub.0006s0470 Capsella rubella HOM05D000876 ORTHO05D000285 4.2e-09 66.2 241 24.5
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.4e-09 65.9 266 24.8
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 5.4e-09 65.9 236 30.9
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.4e-09 65.9 250 24.0
TAR629G0381 Trochodendron aralioides HOM05D011286 ORTHO05D000285 5.4e-09 65.9 214 25.7
Glyma.05G069200 Glycine max HOM05D000876 ORTHO05D000285 7.1e-09 65.5 59 49.2
TWI12G1481 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 7.1e-09 65.5 242 25.2
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.3e-09 65.1 239 23.4
Glyma.04G129400 Glycine max HOM05D000876 ORTHO05D000285 9.3e-09 65.1 57 50.9
Thecc.05G288300 Theobroma cacao HOM05D000876 ORTHO05D000285 9.3e-09 65.1 247 26.7
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-08 64.7 256 23.8
Glyma.18G030600 Glycine max HOM05D000665 ORTHO05D000285 1.2e-08 64.7 233 22.7
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-08 64.3 255 22.0
Medtr3g070080 Medicago truncatula HOM05D000665 ORTHO05D000285 1.6e-08 64.3 233 23.6
Oeu032678.2 Olea europaea HOM05D000876 ORTHO05D000285 1.6e-08 64.3 233 24.0
Ca_14593_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000285 2.1e-08 63.9 233 22.3
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-08 63.9 251 23.1
Glyma.15G226650 Glycine max HOM05D000876 ORTHO05D000285 2.1e-08 63.9 57 49.1
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 2.7e-08 63.5 248 23.4
CiPaw.02G189400 Carya illinoinensis HOM05D000876 ORTHO05D000285 2.7e-08 63.5 234 23.5
COL.COLO4_19726 Corchorus olitorius HOM05D000876 ORTHO05D000285 2.7e-08 63.5 255 25.9
Duzib128G0904 Durio zibethinus HOM05D000876 ORTHO05D000285 2.7e-08 63.5 249 24.9
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 2.7e-08 63.5 249 23.7
THA.LOC104816562 Tarenaya hassleriana HOM05D000876 ORTHO05D000285 2.7e-08 63.5 238 23.9
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 3.5e-08 63.2 88 39.8
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 3.5e-08 63.2 249 23.3
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 4.6e-08 62.8 249 23.3
Hma1.2p1_0148F.1_g066070 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 4.6e-08 62.8 255 24.3
Hma1.2p1_0148F.1_g066080 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 4.6e-08 62.8 255 24.3
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 4.6e-08 62.8 251 22.7
TAR624G0658 Trochodendron aralioides HOM05D011286 ORTHO05D000285 4.6e-08 62.8 229 23.6
Psat5g127400 Pisum sativum HOM05D000665 ORTHO05D000285 6.0e-08 62.4 236 23.3
TAR371G1073 Trochodendron aralioides HOM05D011286 ORTHO05D000285 6.0e-08 62.4 215 25.1
Aa31LG3G4690 Aethionema arabicum HOM05D000876 ORTHO05D000285 7.8e-08 62.0 245 24.9
Glyma.19G101700 Glycine max HOM05D000876 ORTHO05D000285 7.8e-08 62.0 244 24.6
Gorai.005G095500 Gossypium raimondii HOM05D000876 ORTHO05D000285 7.8e-08 62.0 241 28.2
Phvul.001G240000 Phaseolus vulgaris HOM05D000665 ORTHO05D000285 7.8e-08 62.0 235 23.0
SGA_v2.0_scaffold136G35048 Striga asiatica HOM05D045704 ORTHO05D000285 7.8e-08 62.0 226 25.7
TWI36G1398 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.0e-07 61.6 242 21.9
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-07 61.2 239 23.0
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 1.3e-07 61.2 246 22.0
VMungo1383G2642 Vigna mungo HOM05D000665 ORTHO05D000285 1.3e-07 61.2 233 21.9
Aa31LG11G6810 Aethionema arabicum HOM05D000876 ORTHO05D000285 1.7e-07 60.8 245 24.1
Hund26024 Selenicereus undatus HOM05D000876 ORTHO05D002662 1.7e-07 60.8 235 22.1
TWI81G0918 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.7e-07 60.8 242 21.9
Ah.01g014380 Amaranthus hybridus HOM05D000876 ORTHO05D002662 2.3e-07 60.5 242 26.4
Hma1.2p1_1035F.1_g250490 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 2.3e-07 60.5 70 42.9
Hma1.2p1_2073F.1_g313200 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 2.3e-07 60.5 165 29.7
Lj6g0025621 Lotus japonicus HOM05D000876 ORTHO05D000285 2.3e-07 60.5 88 42.0
AL3G22820 Arabidopsis lyrata HOM05D000876 ORTHO05D000285 3.0e-07 60.1 244 22.1
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 3.0e-07 60.1 254 24.4
Glyma.11G226600 Glycine max HOM05D000665 ORTHO05D000285 3.0e-07 60.1 233 22.7
Gorai.005G209400 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.0e-07 60.1 244 25.4
Potri.018G075600 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.9e-07 59.7 266 23.7
Actinidia33947 Actinidia chinensis HOM05D000876 ORTHO05D000285 5.1e-07 59.3 119 29.4
arahy.Tifrunner.gnm1.ann1.GL17HH Arachis hypogaea HOM05D000034 ORTHO05D000037 5.1e-07 59.3 236 24.6
arahy.Tifrunner.gnm1.ann1.2F6TQ9 Arachis hypogaea HOM05D000876 ORTHO05D000285 6.6e-07 58.9 233 25.8
arahy.Tifrunner.gnm1.ann1.I2TZJW Arachis hypogaea HOM05D000876 ORTHO05D000285 6.6e-07 58.9 233 25.8
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.6e-07 58.9 249 22.5
Lj1g0012065 Lotus japonicus HOM05D000876 ORTHO05D000285 6.6e-07 58.9 253 24.9
Potri.010G132850 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.6e-07 58.9 256 23.8
Hma1.2p1_0710F.1_g207390 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 8.7e-07 58.5 239 23.0
Potri.003G192350 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.7e-07 58.5 260 24.2
Potri.004G230401 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.7e-07 58.5 260 24.2
Potri.006G149001 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.7e-07 58.5 260 24.2
Potri.007G062850 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.7e-07 58.5 260 24.2
Potri.013G144650 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.7e-07 58.5 260 24.2
Potri.014G091925 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.7e-07 58.5 260 24.2
TPR.G29813 Trifolium pratense HOM05D004575 ORTHO05D005774 8.7e-07 58.5 233 22.3
AT3G11290 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 1.1e-06 58.2 233 21.0
Glyma.18G094800 Glycine max HOM05D000876 ORTHO05D000285 1.1e-06 58.2 245 23.3
Lj2g0008174 Lotus japonicus HOM05D000876 ORTHO05D000285 1.1e-06 58.2 239 23.4
Potri.001G402200 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-06 58.2 259 24.3
Potri.014G026000 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-06 58.2 259 25.1
HPP92_015385 Vanilla planifolia HOM05D000876 ORTHO05D000285 1.1e-06 58.2 254 21.3
Lalb_Chr20g0116631 Lupinus albus HOM05D000876 ORTHO05D000285 1.5e-06 57.8 234 24.8
Potri.003G006700 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.5e-06 57.8 259 24.3
Hund24071 Selenicereus undatus HOM05D000876 ORTHO05D000285 1.5e-06 57.8 53 47.2
Hund26464 Selenicereus undatus HOM05D000876 ORTHO05D002662 1.5e-06 57.8 54 44.4
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 1.5e-06 57.8 253 23.3
TWI56G0962 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.5e-06 57.8 245 24.9
HPP92_027007 Vanilla planifolia HOM05D000876 ORTHO05D000285 1.5e-06 57.8 254 21.7
AUR62009858 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.9e-06 57.4 59 40.7
Eucgr.G03024 Eucalyptus grandis HOM05D000876 ORTHO05D000285 1.9e-06 57.4 234 21.8
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 1.9e-06 57.4 235 22.6
Potri.001G297801 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.9e-06 57.4 263 24.3
Rhsim03G0139500 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.9e-06 57.4 238 23.5
TWI34G1697 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.9e-06 57.4 258 22.9
TAR383G0653 Trochodendron aralioides HOM05D000555 ORTHO05D000285 1.9e-06 57.4 65 40.0
TAR636G3139 Trochodendron aralioides HOM05D011286 ORTHO05D000285 1.9e-06 57.4 220 25.9
HPP92_018135 Vanilla planifolia HOM05D000876 ORTHO05D000285 1.9e-06 57.4 251 22.3
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 2.5e-06 57.0 95 35.8
QL08p062543 Quercus lobata HOM05D000020 ORTHO05D007189 2.5e-06 57.0 237 25.3
PGSC0003DMG400041016 Solanum tuberosum HOM05D007579 ORTHO05D000285 2.5e-06 57.0 235 21.7
TPR.G33899 Trifolium pratense HOM05D000876 ORTHO05D000285 2.5e-06 57.0 66 43.9
Atru.chr4.1880 Acer truncatum HOM05D000876 ORTHO05D000285 3.3e-06 56.6 72 41.7
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-06 56.6 98 35.7
CARHR207460 Cardamine hirsuta HOM05D000876 ORTHO05D000285 3.3e-06 56.6 238 21.4
Hma1.2p1_0228F.1_g096560 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 3.3e-06 56.6 70 40.0
Ah.08g220620 Amaranthus hybridus HOM05D000876 ORTHO05D000285 4.3e-06 56.2 92 34.8
AL6G15700 Arabidopsis lyrata HOM05D000876 ORTHO05D000285 4.3e-06 56.2 239 20.9
Dinv34430 Davidia involucrata HOM05D000876 ORTHO05D000285 4.3e-06 56.2 119 28.6
Atru.chr12.253 Acer truncatum HOM05D000876 ORTHO05D000285 5.6e-06 55.8 238 25.2
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 5.6e-06 55.8 252 25.0
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 5.6e-06 55.8 252 25.0
CSS0005241 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 5.6e-06 55.8 119 27.7
Gorai.009G359600 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.6e-06 55.8 243 28.8
Gorai.013G171200 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.6e-06 55.8 243 29.2
Medtr1g080080 Medicago truncatula HOM05D000876 ORTHO05D000285 5.6e-06 55.8 66 45.5
Medtr2g018710 Medicago truncatula HOM05D000876 ORTHO05D000285 5.6e-06 55.8 66 45.5
Medtr2g086350 Medicago truncatula HOM05D000876 ORTHO05D000285 5.6e-06 55.8 66 45.5
Potri.005G135800 Populus trichocarpa HOM05D000876 ORTHO05D000285 5.6e-06 55.8 260 23.8
Hund29878 Selenicereus undatus HOM05D000876 ORTHO05D000285 5.6e-06 55.8 54 42.6
Hund29879 Selenicereus undatus HOM05D000876 ORTHO05D000285 5.6e-06 55.8 54 42.6
TWI15G1211 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 5.6e-06 55.8 270 24.1
TAR371G0686 Trochodendron aralioides HOM05D011286 ORTHO05D000285 5.6e-06 55.8 81 38.3
Medtr2g435870 Medicago truncatula HOM05D000876 ORTHO05D000285 7.3e-06 55.5 66 42.4
Os12g0207200 Oryza sativa ssp. japonica HOM05D000876 ORTHO05D000285 7.3e-06 55.5 247 22.3
QL01p041709 Quercus lobata HOM05D000876 ORTHO05D000285 7.3e-06 55.5 59 44.1
QL03p014458 Quercus lobata HOM05D000876 ORTHO05D000285 7.3e-06 55.5 59 44.1
QL06p033300 Quercus lobata HOM05D000876 ORTHO05D000285 7.3e-06 55.5 82 39.0
THA.LOC104823140 Tarenaya hassleriana HOM05D000876 ORTHO05D000285 7.3e-06 55.5 237 25.3
TPR.G30704 Trifolium pratense HOM05D000876 ORTHO05D000285 7.3e-06 55.5 62 45.2
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 9.6e-06 55.1 244 21.3
Gorai.008G062400 Gossypium raimondii HOM05D000876 ORTHO05D000285 9.6e-06 55.1 243 28.0
Gorai.010G149000 Gossypium raimondii HOM05D000876 ORTHO05D000285 9.6e-06 55.1 244 25.0
Hund20247 Selenicereus undatus HOM05D000876 ORTHO05D002662 9.6e-06 55.1 54 42.6
TWI73G0844 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 9.6e-06 55.1 88 37.5
TWI75G0795 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 9.6e-06 55.1 228 23.2


User provided reference genes

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