Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.3e-261 904.4 434 100.0
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 2.0e-149 533.1 366 68.6
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.3e-145 519.6 367 67.3
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 5.1e-145 518.5 360 66.7
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 6.6e-145 518.1 358 67.3
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 1.5e-144 516.9 359 66.6
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.8e-142 510.0 332 70.5
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.0e-141 506.5 369 65.0
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.0e-141 506.5 369 65.0
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 2.0e-141 506.5 361 65.9
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 4.4e-141 505.4 367 64.9
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 2.4e-139 499.6 332 67.5
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 2.7e-138 496.1 366 63.1
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 3.5e-138 495.7 359 65.5
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 1.0e-137 494.2 362 65.7
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.3e-137 493.8 369 64.5
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 1.7e-137 493.4 356 64.9
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 3.0e-137 492.7 334 68.0
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 3.9e-137 492.3 353 65.2
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 5.1e-137 491.9 357 64.4
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.9e-136 490.0 364 64.3
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 3.3e-136 489.2 332 66.9
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 3.3e-136 489.2 356 63.2
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 4.3e-136 488.8 367 65.9
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 7.3e-136 488.0 361 63.2
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 9.6e-136 487.6 356 64.3
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 1.3e-135 487.3 356 63.5
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 1.3e-135 487.3 332 66.9
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 2.1e-135 486.5 354 63.6
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.1e-135 486.5 356 63.8
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 2.1e-135 486.5 396 60.1
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 2.8e-135 486.1 365 64.4
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 2.8e-135 486.1 332 65.1
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 4.8e-135 485.3 352 64.5
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 4.8e-135 485.3 356 65.7
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 6.2e-135 485.0 361 64.8
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 8.1e-135 484.6 354 64.4
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 8.1e-135 484.6 332 65.7
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.1e-134 484.2 332 67.5
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 1.1e-134 484.2 363 63.1
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 1.1e-134 484.2 358 63.4
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 1.1e-134 484.2 352 64.2
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 1.4e-134 483.8 367 62.4
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.4e-134 483.0 358 61.5
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 3.1e-134 482.6 358 62.8
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 3.1e-134 482.6 334 67.1
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 5.3e-134 481.9 358 62.6
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.2e-133 480.7 356 63.2
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 2.0e-133 479.9 367 61.3
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.0e-133 479.9 364 62.9
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 2.6e-133 479.6 356 63.8
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.6e-133 479.6 364 62.9
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 4.5e-133 478.8 332 63.9
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 4.5e-133 478.8 369 62.3
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.6e-133 478.0 356 63.2
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.3e-132 477.2 364 62.9
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 1.3e-132 477.2 364 61.3
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 1.7e-132 476.9 332 65.4
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 3.8e-132 475.7 332 66.6
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 3.8e-132 475.7 332 65.1
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 1.9e-131 473.4 333 66.7
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.9e-131 473.4 360 64.2
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.9e-131 473.4 333 64.9
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 2.4e-131 473.0 359 61.8
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 2.4e-131 473.0 332 65.7
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 5.4e-131 471.9 332 63.9
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 7.1e-131 471.5 332 64.5
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 2.1e-130 469.9 352 61.9
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 3.5e-130 469.2 351 62.1
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 3.5e-130 469.2 332 63.6
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 4.6e-130 468.8 358 62.0
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 7.9e-130 468.0 320 65.6
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 7.9e-130 468.0 332 63.9
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 2.3e-129 466.5 367 61.0
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 4.3e-128 462.2 332 63.6
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.6e-127 460.3 336 64.0
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.8e-127 459.5 367 59.1
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 1.4e-126 457.2 368 60.1
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 1.8e-126 456.8 366 60.9
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 4.0e-126 455.7 308 68.5
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 9.0e-126 454.5 357 59.7
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 9.0e-126 454.5 357 59.7
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 9.0e-126 454.5 357 59.7
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 1.2e-125 454.1 357 59.9
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.2e-125 454.1 357 59.9
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 2.0e-125 453.4 368 60.6
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.6e-125 453.0 358 59.8
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 5.8e-125 451.8 350 61.1
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 7.6e-125 451.4 357 59.4
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 1.0e-124 451.1 301 67.4
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.2e-123 445.7 324 64.8
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 5.5e-123 445.3 375 56.8
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.2e-122 444.1 333 61.3
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 3.5e-122 442.6 344 60.5
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 6.0e-122 441.8 385 56.1
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 8.7e-121 438.0 395 55.4
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 9.6e-120 434.5 307 63.2
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 1.1e-110 404.4 369 52.3
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.0e-108 397.9 311 60.8
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.0e-104 383.6 323 56.0
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 7.7e-93 345.1 352 50.3
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 1.0e-92 344.7 226 64.6
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 2.6e-85 320.1 214 63.6
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 2.3e-81 307.0 235 60.4
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.5e-75 287.7 226 59.7
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 8.3e-63 245.4 183 60.1
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 9.8e-56 221.9 148 64.2
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-52 211.5 346 37.3
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 3.0e-20 104.0 103 54.4
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 5.1e-12 76.6 52 59.6
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 5.6e-11 73.2 78 48.7
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 4.5e-08 63.5 79 43.0


User provided reference genes

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