Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 9.1e-122 440.3 226 100.0
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 1.3e-88 330.1 232 74.1
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 8.1e-86 320.9 232 73.3
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 8.9e-85 317.4 231 69.7
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 1.2e-84 317.0 232 71.1
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 1.3e-83 313.5 233 71.2
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 2.9e-83 312.4 226 71.7
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 2.4e-82 309.3 231 67.1
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 4.2e-82 308.5 229 70.3
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 9.3e-82 307.4 226 69.0
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 1.6e-81 306.6 234 68.8
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 1.6e-81 306.6 229 69.9
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 2.1e-81 306.2 228 68.4
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 2.1e-81 306.2 228 69.7
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 1.3e-80 303.5 226 69.5
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 8.7e-80 300.8 232 69.0
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 1.5e-79 300.1 226 67.7
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.5e-79 299.3 228 70.2
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 4.3e-79 298.5 233 66.1
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 7.3e-79 297.7 232 65.9
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 2.8e-78 295.8 228 68.0
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 3.6e-78 295.4 231 64.9
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 3.6e-78 295.4 228 66.2
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 4.8e-78 295.0 232 68.1
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 6.2e-78 294.7 232 65.9
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 8.1e-78 294.3 232 65.1
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 1.4e-77 293.5 229 65.1
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 3.1e-77 292.4 228 65.8
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 3.1e-77 292.4 231 64.5
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 5.3e-77 291.6 226 66.4
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.5e-76 290.0 226 66.8
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 4.4e-76 288.5 230 65.2
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 7.6e-76 287.7 228 64.0
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 9.9e-76 287.3 226 66.4
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 2.9e-75 285.8 227 67.4
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 4.9e-75 285.0 233 63.9
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 6.4e-75 284.6 228 65.4
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 8.4e-75 284.3 226 65.0
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 1.4e-74 283.5 226 64.6
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 1.9e-74 283.1 227 64.3
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 7.1e-74 281.2 226 65.9
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 9.3e-74 280.8 228 63.6
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 1.2e-73 280.4 228 63.6
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.6e-73 280.0 225 65.8
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 1.6e-73 280.0 232 64.2
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 1.6e-73 280.0 226 64.6
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 2.7e-73 279.3 225 64.9
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 2.7e-73 279.3 226 63.7
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 4.6e-73 278.5 231 61.5
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 6.0e-73 278.1 222 67.6
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 6.0e-73 278.1 233 63.1
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 7.9e-73 277.7 224 65.2
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 1.7e-72 276.6 226 64.6
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 1.7e-72 276.6 226 62.8
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 2.3e-72 276.2 227 62.1
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 5.1e-72 275.0 230 63.0
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 8.7e-72 274.2 226 65.0
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 8.7e-72 274.2 219 64.8
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 3.3e-71 272.3 228 61.8
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 9.6e-71 270.8 219 65.3
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 9.6e-71 270.8 230 61.3
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 2.8e-70 269.2 226 61.9
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 3.6e-70 268.9 227 63.0
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 4.8e-70 268.5 226 62.8
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 8.1e-70 267.7 226 60.6
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 1.1e-69 267.3 226 62.8
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 1.1e-69 267.3 226 61.5
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 3.1e-69 265.8 227 61.2
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 3.1e-69 265.8 226 59.3
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 4.0e-69 265.4 223 64.6
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 2.0e-68 263.1 282 53.5
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 2.6e-68 262.7 224 60.7
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.4e-68 262.3 226 61.5
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 3.8e-67 258.8 226 60.2
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 1.4e-66 256.9 221 62.0
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.9e-66 256.5 227 59.9
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 4.2e-66 255.4 229 62.0
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 4.2e-66 255.4 238 58.4
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 5.5e-66 255.0 221 59.7
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 2.1e-65 253.1 225 61.3
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 3.5e-65 252.3 230 58.7
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 6.0e-65 251.5 210 62.4
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 7.9e-65 251.1 226 58.4
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.1e-63 247.3 226 58.4
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 9.6e-63 244.2 219 59.8
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 1.6e-62 243.4 226 58.4
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 1.4e-61 240.4 225 57.3
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 1.8e-61 240.0 216 57.4
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 9.0e-61 237.7 238 58.0
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 2.9e-59 232.6 234 54.7
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 4.9e-59 231.9 252 51.2
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.4e-58 230.3 207 59.4
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 7.1e-58 228.0 233 52.4
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 2.1e-57 226.5 249 53.0
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 8.7e-56 221.1 233 51.1
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 7.4e-55 218.0 226 52.7
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 6.3e-54 214.9 226 51.3
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 1.8e-53 213.4 219 53.0
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 2.4e-53 213.0 166 67.5
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 2.4e-53 213.0 221 50.7
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 4.1e-53 212.2 233 49.4
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 7.6e-52 208.0 220 51.8
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 1.0e-51 207.6 219 53.4
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.7e-51 206.8 227 53.3
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.4e-50 203.8 165 67.3
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.6e-49 200.3 206 52.9
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 1.1e-45 187.6 214 50.0
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.2e-41 174.1 158 58.9
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 4.6e-41 172.2 159 57.9
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-37 159.8 262 36.3
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 5.1e-32 142.1 143 55.2
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 7.4e-31 138.3 106 62.3
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 8.2e-30 134.8 189 42.9
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 5.3e-29 132.1 105 63.8
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 7.0e-29 131.7 220 38.6
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.0e-28 130.2 119 55.5
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 5.9e-28 128.6 116 58.6
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 6.5e-27 125.2 279 33.0
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 1.9e-26 123.6 94 61.7
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 1.6e-25 120.6 196 39.3
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 4.8e-22 109.0 74 77.0
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 1.8e-21 107.1 162 42.0
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.8e-21 107.1 162 42.0
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 1.2e-17 94.4 63 71.4
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 4.7e-17 92.4 87 62.1
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 4.7e-17 92.4 82 52.4
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 3.0e-16 89.7 82 50.0
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 5.2e-16 89.0 89 47.2
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.5e-15 87.4 61 68.9
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 4.4e-15 85.9 82 48.8
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 9.8e-15 84.7 54 75.9
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 1.6e-12 77.4 77 55.8
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 2.9e-11 73.2 77 42.9


User provided reference genes

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