Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 8.2e-263 909.8 457 100.0
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 6.7e-164 581.3 436 70.6
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.4e-156 557.0 432 68.3
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 4.4e-147 525.4 422 66.6
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 2.9e-143 512.7 442 62.4
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 1.9e-142 510.0 437 63.6
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 4.2e-142 508.8 436 62.6
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 8.0e-141 504.6 443 60.0
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 2.3e-140 503.1 441 63.3
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 8.8e-140 501.1 441 63.0
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 5.7e-139 498.4 433 62.8
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 9.8e-139 497.7 453 60.3
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 4.8e-138 495.4 435 61.8
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 8.3e-138 494.6 442 61.5
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.4e-137 493.8 479 59.5
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 4.1e-137 492.3 430 62.3
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 4.1e-137 492.3 440 60.2
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 9.1e-137 491.1 441 60.3
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 1.6e-136 490.3 457 58.9
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.6e-136 490.3 449 60.1
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.7e-136 489.6 429 60.8
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 3.2e-134 482.6 428 61.4
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.2e-134 482.6 474 58.4
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 5.5e-134 481.9 440 61.1
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 7.2e-134 481.5 430 60.0
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.2e-133 480.7 431 61.5
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.6e-133 480.3 428 61.2
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 3.6e-133 479.2 444 58.1
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 8.0e-133 478.0 444 59.5
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.4e-132 477.2 439 60.8
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.5e-131 473.8 436 59.6
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 2.6e-131 473.0 436 58.7
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.4e-131 472.2 428 61.0
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 3.7e-130 469.2 429 60.4
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 8.3e-130 468.0 425 60.0
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 3.1e-129 466.1 444 57.9
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 5.4e-129 465.3 425 59.8
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 5.4e-129 465.3 425 59.8
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 2.0e-128 463.4 428 58.6
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 5.9e-128 461.8 443 57.8
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.0e-127 461.1 425 59.1
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.3e-127 460.7 431 59.6
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 5.0e-127 458.8 434 59.2
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 1.5e-126 457.2 440 58.0
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 5.6e-126 455.3 420 60.0
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 2.3e-124 449.9 438 56.4
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 3.0e-124 449.5 433 57.7
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 5.2e-124 448.7 429 56.9
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 6.8e-124 448.4 434 57.6
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 8.9e-124 448.0 431 57.8
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 8.9e-124 448.0 449 56.1
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.7e-122 443.7 443 56.0
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 1.4e-121 440.7 449 54.8
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.0e-120 436.8 438 56.4
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 7.8e-120 434.9 436 56.7
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 7.8e-120 434.9 432 56.0
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 1.3e-119 434.1 437 54.9
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 4.3e-118 429.1 438 55.3
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.3e-118 429.1 444 54.5
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 5.6e-118 428.7 441 56.9
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 4.0e-116 422.5 425 57.9
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 1.5e-115 420.6 435 54.3
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 4.4e-115 419.1 450 53.8
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 5.8e-115 418.7 440 54.8
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 2.2e-114 416.8 447 53.5
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 2.2e-114 416.8 447 53.5
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 2.9e-114 416.4 435 54.0
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 3.7e-114 416.0 436 56.4
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 1.9e-113 413.7 438 56.2
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 6.0e-112 408.7 438 54.3
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.9e-110 403.7 441 54.2
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.3e-110 402.5 431 54.8
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 7.8e-104 381.7 435 49.7
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 3.0e-103 379.8 437 50.6
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.6e-103 378.6 451 49.4
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.4e-100 370.9 448 49.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 2.4e-100 370.2 447 49.0
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.0e-95 354.8 428 52.3
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.4e-92 344.4 360 56.1
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 2.0e-91 340.5 427 47.5
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 4.9e-90 335.9 418 47.8
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 8.4e-90 335.1 406 49.3
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 1.9e-89 334.0 389 51.7
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.3e-87 327.8 443 47.0
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 2.5e-86 323.6 431 45.2
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 3.3e-86 323.2 430 45.3
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 9.6e-86 321.6 434 45.2
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.3e-85 321.2 342 53.8
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 6.0e-80 302.4 451 44.1
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.1e-77 293.9 510 40.2
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 3.7e-77 293.1 286 58.4
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 4.0e-76 289.7 492 39.6
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 2.0e-75 287.3 242 63.6
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 2.9e-74 283.5 431 43.4
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 3.0e-71 273.5 440 42.3
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.9e-70 270.8 434 39.9
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 8.2e-69 265.4 450 41.3
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 1.0e-66 258.5 434 41.5
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 2.9e-66 256.9 442 39.8
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.1e-65 255.0 439 40.8
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.4e-65 254.6 222 62.6
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.2e-59 235.0 236 58.9
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 3.4e-59 233.4 263 55.5
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 6.5e-58 229.2 449 36.3
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.3e-53 214.9 484 33.1
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 6.5e-50 202.6 365 36.4
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 3.1e-44 183.7 554 30.0
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 1.7e-42 177.9 313 44.7
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.3e-39 167.5 516 28.5
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.1e-36 158.7 159 57.2
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 2.3e-31 141.0 84 82.1
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.7e-29 134.8 308 34.7
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 1.2e-22 112.1 90 64.4
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 5.7e-14 83.2 56 66.1
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 9.2e-12 75.9 127 37.0
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 9.5e-09 65.9 162 36.4
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 6.1e-08 63.2 51 54.9
Nn2g12138 Nelumbo nucifera HOM05D006568 ORTHO05D272326 7.5e-06 56.2 28 92.9


User provided reference genes

Program Settings