Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39600 Nelumbo nucifera HOM05D000063 ORTHO05D270815 6.7e-30 133.3 63 100.0
Nn5g29588 Nelumbo nucifera HOM05D000063 ORTHO05D006552 1.0e-14 82.8 49 81.6
TAR628G1337 Trochodendron aralioides HOM05D000063 ORTHO05D006552 1.8e-11 72.0 49 71.4
Manes.02G093300 Manihot esculenta HOM05D000063 ORTHO05D006552 1.5e-10 68.9 49 67.3
Gohir.A02G164900 Gossypium hirsutum HOM05D000063 ORTHO05D006552 1.3e-09 65.9 49 65.3
Dinv39979 Davidia involucrata HOM05D000063 ORTHO05D006552 1.7e-09 65.5 49 65.3
Duzib187G1709 Durio zibethinus HOM05D000063 ORTHO05D006552 3.8e-09 64.3 49 63.3
GSVIVG01018975001 Vitis vinifera HOM05D000063 ORTHO05D006552 6.5e-09 63.5 49 63.3
Gohir.D03G015100 Gossypium hirsutum HOM05D000063 ORTHO05D006552 1.4e-08 62.4 49 61.2
Gorai.003G015400 Gossypium raimondii HOM05D000063 ORTHO05D006552 1.4e-08 62.4 49 61.2
CSS0008701 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D006552 2.5e-08 61.6 50 58.0
COL.COLO4_22087 Corchorus olitorius HOM05D000063 ORTHO05D006552 2.5e-08 61.6 49 61.2
Duzib147G0595 Durio zibethinus HOM05D000063 ORTHO05D006552 3.2e-08 61.2 49 59.2
Aqoxy6G01097 Aquilegia oxysepala HOM05D000063 ORTHO05D006552 5.5e-08 60.5 49 57.1
Migut.H00996 Erythranthe guttata HOM05D000063 ORTHO05D006552 9.4e-08 59.7 50 56.0
Dinv13537 Davidia involucrata HOM05D000063 ORTHO05D006552 1.2e-07 59.3 51 60.8
Nn1g05012 Nelumbo nucifera HOM05D000063 ORTHO05D006552 1.2e-07 59.3 49 61.2
Thecc.01G036700 Theobroma cacao HOM05D000063 ORTHO05D006552 1.2e-07 59.3 49 57.1
Duzib264G0653 Durio zibethinus HOM05D000063 ORTHO05D006552 1.6e-07 58.9 45 62.2
QL06p045917 Quercus lobata HOM05D000063 ORTHO05D006552 1.6e-07 58.9 49 59.2
MSTRG.2758 Avicennia marina HOM05D000063 ORTHO05D006552 2.1e-07 58.5 46 56.5
Gohir.D12G064900 Gossypium hirsutum HOM05D000063 ORTHO05D006552 2.7e-07 58.2 49 57.1
Gorai.008G068100 Gossypium raimondii HOM05D000063 ORTHO05D006552 2.7e-07 58.2 49 57.1
Lj4P201T24 Lonicera japonica HOM05D000063 ORTHO05D006552 4.6e-07 57.4 49 51.0
MBI16_g34335_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D006552 4.6e-07 57.4 51 58.8
Cpa.g.sc6.108 Carica papaya HOM05D000063 ORTHO05D006552 6.1e-07 57.0 49 57.1
Gohir.A12G064800 Gossypium hirsutum HOM05D000063 ORTHO05D006552 6.1e-07 57.0 49 55.1
Manes.01G134900 Manihot esculenta HOM05D000063 ORTHO05D006552 6.1e-07 57.0 49 55.1
MSTRG.23530 Avicennia marina HOM05D000063 ORTHO05D006552 1.0e-06 56.2 50 52.0
Cc07_g09460 Coffea canephora HOM05D000063 ORTHO05D006552 1.4e-06 55.8 49 53.1
FAN23G2312 Fragaria x ananassa HOM05D000063 ORTHO05D006552 2.3e-06 55.1 50 56.0
FAN28G0791 Fragaria x ananassa HOM05D000063 ORTHO05D006552 3.0e-06 54.7 50 56.0
CANSAT01G2661 Cannabis sativa HOM05D000063 ORTHO05D006552 5.1e-06 53.9 51 56.9
Oeu050528.1 Olea europaea HOM05D000063 ORTHO05D006552 5.1e-06 53.9 50 48.0
Solyc02g085340.1 Solanum lycopersicum HOM05D000063 ORTHO05D006552 5.1e-06 53.9 51 54.9
Sopen02g030030 Solanum pennellii HOM05D000063 ORTHO05D006552 5.1e-06 53.9 51 54.9
Cfa004302 Carpinus fangiana HOM05D000063 ORTHO05D006552 6.7e-06 53.5 52 55.8
SGA_v2.0_scaffold33G13362 Striga asiatica HOM05D000063 ORTHO05D006552 8.8e-06 53.1 50 52.0
TWI73G0173 Tripterygium wilfordii HOM05D000063 ORTHO05D006552 8.8e-06 53.1 50 50.0


User provided reference genes

Program Settings