Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.7e-103 379.4 204 100.0
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 7.4e-54 214.5 203 67.5
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 1.8e-52 209.9 201 62.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.4e-52 209.5 201 64.7
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 9.0e-52 207.6 204 63.2
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.0e-51 206.5 202 65.3
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.7e-50 203.4 163 68.7
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.7e-50 203.4 208 63.9
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 2.9e-50 202.6 151 75.5
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.4e-49 200.3 194 61.9
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 4.2e-49 198.7 201 62.2
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 4.2e-49 198.7 203 60.1
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.2e-48 197.2 201 61.2
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.7e-48 196.1 201 61.7
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 6.0e-48 194.9 205 62.4
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 1.8e-47 193.4 204 59.8
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.3e-47 193.0 202 61.4
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.0e-47 192.6 206 60.2
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.9e-47 192.2 202 60.4
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 3.9e-47 192.2 201 60.2
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 3.9e-47 192.2 204 60.8
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.9e-46 189.9 201 60.2
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.5e-46 189.5 206 57.3
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.5e-46 189.5 154 69.5
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.3e-46 189.1 201 60.2
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 4.3e-46 188.7 205 59.5
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 5.7e-46 188.3 182 60.4
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 9.6e-46 187.6 210 57.1
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.8e-45 186.0 200 60.5
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 3.7e-45 185.7 202 58.9
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 4.8e-45 185.3 204 60.8
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 8.2e-45 184.5 204 57.4
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 8.2e-45 184.5 205 59.0
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 8.2e-45 184.5 177 59.9
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.4e-44 183.7 202 58.4
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.8e-44 183.3 203 61.1
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 5.3e-44 181.8 226 56.6
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 6.9e-44 181.4 204 58.8
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 6.9e-44 181.4 200 59.5
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 9.0e-44 181.0 188 61.2
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 2.0e-43 179.9 200 58.0
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 3.4e-43 179.1 179 64.2
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 4.5e-43 178.7 203 56.2
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 4.5e-43 178.7 202 58.4
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.0e-42 177.6 183 57.9
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.0e-42 177.6 203 58.1
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.3e-42 177.2 190 56.8
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 2.2e-42 176.4 202 57.9
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 3.8e-42 175.6 204 56.9
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 3.8e-42 175.6 202 57.4
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 5.0e-42 175.3 203 57.6
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 6.5e-42 174.9 205 57.6
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 6.5e-42 174.9 156 63.5
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 8.5e-42 174.5 211 55.9
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 8.5e-42 174.5 153 61.4
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.9e-41 173.3 200 55.0
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 2.5e-41 172.9 180 61.1
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.5e-41 172.9 204 55.9
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.5e-41 172.9 173 56.6
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 2.5e-41 172.9 202 58.9
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 4.2e-41 172.2 201 55.7
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 4.2e-41 172.2 124 78.2
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 7.2e-41 171.4 201 56.7
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 9.3e-41 171.0 206 55.8
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 9.3e-41 171.0 181 59.1
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 2.1e-40 169.9 200 57.0
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 2.7e-40 169.5 183 55.7
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.7e-40 169.5 204 54.9
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 4.6e-40 168.7 200 55.5
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 4.6e-40 168.7 214 54.2
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 6.1e-40 168.3 154 68.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.0e-39 167.5 201 56.7
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 6.7e-39 164.9 202 52.5
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.7e-39 164.9 187 54.0
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.7e-39 164.9 187 54.0
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 6.7e-39 164.9 154 64.3
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 6.7e-39 164.9 189 56.1
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.5e-38 163.7 153 60.1
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.5e-38 163.7 136 66.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.5e-38 163.7 204 54.9
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.9e-38 163.3 184 54.3
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.9e-38 163.3 183 56.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 2.5e-38 162.9 153 60.1
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.5e-38 162.9 198 51.5
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 4.3e-38 162.2 176 55.7
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 5.7e-38 161.8 190 53.7
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 5.7e-38 161.8 187 52.9
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.7e-38 161.8 187 52.9
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 9.7e-38 161.0 176 54.5
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 9.7e-38 161.0 224 50.9
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 2.2e-37 159.8 200 52.0
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 3.7e-37 159.1 235 46.4
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 4.8e-37 158.7 203 51.2
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.3e-37 158.3 139 64.0
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 8.2e-37 157.9 164 58.5
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 8.2e-37 157.9 158 59.5
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.1e-36 157.5 109 78.0
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.4e-36 157.1 200 53.0
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 2.4e-36 156.4 202 54.5
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 6.9e-36 154.8 179 52.5
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 4.5e-35 152.1 179 55.9
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 5.9e-35 151.8 223 50.2
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 7.7e-35 151.4 126 68.3
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.7e-34 150.2 124 68.5
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 2.9e-34 149.4 202 51.0
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.1e-33 147.5 192 52.1
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.9e-33 146.7 98 79.6
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.9e-33 146.7 179 53.6
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 4.6e-32 142.1 135 59.3
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.4e-31 140.6 190 48.9
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.4e-28 129.8 154 53.2
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 1.7e-26 123.6 180 49.4
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 6.7e-23 111.7 104 63.5
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.4e-20 104.0 108 50.9
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.6e-19 100.5 75 70.7
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 3.5e-19 99.4 125 45.6
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.9e-19 98.6 92 60.9
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 2.2e-18 96.7 145 41.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 2.5e-17 93.2 92 57.6
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.2e-16 90.9 148 39.9
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.0e-15 87.8 200 37.0
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 2.8e-13 79.7 75 53.3
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.2e-10 70.1 114 40.4
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.4e-07 60.8 82 47.6
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.0e-07 59.7 71 45.1


User provided reference genes

Program Settings