Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 6.6e-102 374.0 186 100.0
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.2e-81 305.8 188 79.8
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 1.1e-67 260.4 191 68.6
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.8e-67 259.6 188 68.6
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 4.1e-67 258.5 191 68.1
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 5.3e-67 258.1 188 66.5
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 6.9e-67 257.7 187 66.8
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 2.0e-66 256.1 188 67.6
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.4e-64 250.0 187 64.2
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 7.2e-64 247.7 189 63.0
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 7.2e-64 247.7 188 63.3
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.2e-63 246.9 189 65.1
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.6e-63 245.4 188 62.2
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 6.1e-63 244.6 188 62.2
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 6.1e-63 244.6 185 66.5
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 7.9e-63 244.2 189 64.0
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 6.7e-62 241.1 180 66.1
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 8.8e-62 240.7 188 62.8
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.1e-61 240.4 188 62.8
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 2.5e-61 239.2 188 62.8
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.5e-61 239.2 192 59.9
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 9.7e-61 237.3 185 61.6
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 9.7e-61 237.3 183 65.0
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 1.3e-60 236.9 185 62.2
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 2.2e-60 236.1 186 61.8
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 4.8e-60 235.0 189 60.3
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.8e-59 233.0 181 63.5
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.4e-59 232.6 191 62.3
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 3.1e-59 232.3 188 60.1
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 4.1e-59 231.9 189 59.8
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 5.3e-59 231.5 191 61.3
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 6.9e-59 231.1 194 59.3
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 6.9e-59 231.1 191 61.3
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 6.9e-59 231.1 189 59.8
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 9.1e-59 230.7 188 60.6
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.2e-58 230.3 185 61.1
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.2e-58 230.3 189 61.4
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 2.6e-58 229.2 189 60.3
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 3.4e-58 228.8 189 60.3
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 5.9e-58 228.0 190 61.1
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.9e-58 228.0 188 60.6
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 5.9e-58 228.0 188 61.2
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 1.0e-57 227.3 189 60.3
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 1.7e-57 226.5 194 58.8
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.2e-57 226.1 188 59.6
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 2.2e-57 226.1 187 60.4
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 3.8e-57 225.3 189 59.8
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.8e-57 225.3 189 60.3
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.8e-57 225.3 189 60.3
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 5.0e-57 224.9 189 59.3
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 5.0e-57 224.9 188 58.5
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 5.0e-57 224.9 189 61.4
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 6.5e-57 224.6 189 59.3
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 6.5e-57 224.6 189 60.8
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 8.5e-57 224.2 189 59.8
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 8.5e-57 224.2 195 56.9
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 1.1e-56 223.8 195 58.5
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.9e-56 223.0 189 59.8
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 3.2e-56 222.2 188 62.2
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 4.2e-56 221.9 189 59.3
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 7.2e-56 221.1 191 58.6
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 9.4e-56 220.7 188 59.6
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 3.6e-55 218.8 178 59.6
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 3.6e-55 218.8 188 57.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 4.7e-55 218.4 195 56.9
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 6.1e-55 218.0 189 57.7
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 6.1e-55 218.0 189 59.3
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 7.9e-55 217.6 187 59.4
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 1.4e-54 216.9 195 58.5
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.4e-54 216.9 159 69.8
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 1.4e-54 216.9 189 59.8
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.8e-54 216.5 189 55.0
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 2.3e-54 216.1 195 57.4
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 5.1e-54 214.9 189 57.7
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 5.1e-54 214.9 189 57.7
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 6.7e-54 214.5 195 57.9
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.1e-53 213.8 222 51.8
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 2.0e-53 213.0 189 57.1
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.3e-53 212.2 185 56.8
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 4.4e-53 211.8 185 56.8
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 4.4e-53 211.8 185 56.8
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.7e-52 209.9 185 56.2
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 4.8e-52 208.4 187 58.3
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 6.3e-52 208.0 181 57.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 8.2e-52 207.6 179 58.7
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 8.2e-52 207.6 187 56.1
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 1.1e-51 207.2 250 46.4
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 7.0e-51 204.5 178 56.2
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.5e-50 203.4 140 71.4
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 4.5e-50 201.8 190 57.4
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 5.9e-50 201.4 200 55.0
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.0e-49 200.7 146 61.6
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 6.5e-49 198.0 200 55.5
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 9.7e-45 184.1 144 63.9
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.3e-44 183.7 141 61.7
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.2e-44 183.0 190 54.7
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.4e-43 180.3 153 56.2
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.0e-42 176.4 150 58.0
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.3e-41 173.7 188 52.7
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 2.3e-38 162.9 160 52.5
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 6.7e-38 161.4 187 47.6
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 2.9e-33 146.0 131 52.7
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 5.0e-33 145.2 152 49.3
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 1.9e-32 143.3 190 46.3
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 3.0e-30 136.0 165 44.2
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 2.8e-28 129.4 158 41.8
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 4.5e-26 122.1 128 44.5
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.7e-25 120.2 86 65.1
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.2e-24 115.5 103 53.4
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 4.2e-24 115.5 91 60.4
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 3.0e-22 109.4 89 62.9
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 9.8e-21 104.4 85 63.5
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 1.3e-20 104.0 164 32.3
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 3.7e-20 102.4 94 51.1
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 6.6e-17 91.7 65 75.4
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.2e-15 87.4 72 59.7
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 6.8e-14 81.6 106 36.8
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 8.9e-14 81.3 100 49.0
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 3.9e-09 65.9 51 54.9


User provided reference genes

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