Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39168 Nelumbo nucifera HOM05D003621 ORTHO05D004259 8.6e-72 273.5 131 100.0
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 5.1e-48 194.5 130 76.2
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.2e-46 189.9 125 77.6
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 1.5e-39 166.4 127 66.9
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 3.6e-38 161.8 128 65.6
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.6e-38 161.8 128 62.5
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.6e-38 161.8 128 62.5
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 3.6e-38 161.8 128 62.5
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 8.1e-38 160.6 128 64.1
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 8.1e-38 160.6 129 62.0
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 1.4e-37 159.8 128 64.1
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.4e-37 159.8 128 64.1
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 1.4e-37 159.8 128 64.1
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 1.8e-37 159.5 129 62.8
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 1.8e-37 159.5 128 62.5
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 2.4e-37 159.1 129 61.2
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 3.1e-37 158.7 128 62.5
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 4.0e-37 158.3 128 63.3
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 4.0e-37 158.3 129 61.2
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 9.0e-37 157.1 126 64.3
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 9.0e-37 157.1 128 61.7
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 9.0e-37 157.1 128 62.5
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 1.2e-36 156.8 129 62.0
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 1.2e-36 156.8 128 61.7
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 1.2e-36 156.8 127 61.4
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.5e-36 156.4 128 63.3
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 2.0e-36 156.0 128 61.7
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 2.0e-36 156.0 129 60.5
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.6e-36 155.6 128 61.7
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 2.6e-36 155.6 128 62.5
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 3.4e-36 155.2 128 60.9
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 4.4e-36 154.8 128 61.7
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 5.8e-36 154.5 128 62.5
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 9.9e-36 153.7 129 60.5
Nn8g39164 Nelumbo nucifera HOM05D003621 ORTHO05D004259 9.9e-36 153.7 77 93.5
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 9.9e-36 153.7 122 66.4
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 1.3e-35 153.3 128 62.5
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 1.7e-35 152.9 128 60.9
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.2e-35 152.5 118 66.1
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 2.2e-35 152.5 124 62.9
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 2.9e-35 152.1 128 59.4
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 2.9e-35 152.1 129 59.7
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 3.8e-35 151.8 128 59.4
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 3.8e-35 151.8 129 59.7
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 4.9e-35 151.4 129 58.9
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 1.1e-34 150.2 120 65.0
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 2.4e-34 149.1 126 61.1
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 4.2e-34 148.3 121 64.5
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 4.2e-34 148.3 129 58.1
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 5.4e-34 147.9 129 58.1
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 7.1e-34 147.5 120 63.3
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 9.3e-34 147.1 126 60.3
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 9.3e-34 147.1 126 60.3
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 1.6e-33 146.4 128 59.4
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 1.6e-33 146.4 121 62.0
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 2.7e-33 145.6 123 60.2
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 6.0e-33 144.4 126 59.5
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 1.0e-32 143.7 123 60.2
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 1.0e-32 143.7 122 60.7
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.3e-32 143.3 120 62.5
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 1.3e-32 143.3 122 61.5
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 1.3e-32 143.3 122 60.7
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 1.7e-32 142.9 121 59.5
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 2.3e-32 142.5 144 55.6
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 3.9e-32 141.7 128 57.8
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 5.1e-32 141.4 128 57.8
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 6.6e-32 141.0 119 60.5
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 8.7e-32 140.6 119 62.2
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 8.7e-32 140.6 119 62.2
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 2.5e-31 139.0 120 62.5
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 5.6e-31 137.9 119 59.7
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 9.6e-31 137.1 120 58.3
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 9.6e-31 137.1 129 55.8
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 1.6e-30 136.3 121 60.3
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 1.6e-30 136.3 125 56.8
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 1.6e-30 136.3 119 59.7
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 2.8e-30 135.6 117 59.8
TAR376G0449 Trochodendron aralioides HOM05D003621 ORTHO05D004259 4.8e-30 134.8 147 52.4
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 1.1e-29 133.7 118 59.3
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 1.1e-29 133.7 122 54.1
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 1.4e-29 133.3 120 57.5
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 1.4e-29 133.3 119 58.8
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 1.8e-29 132.9 120 58.3
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 2.4e-29 132.5 127 54.3
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 4.0e-29 131.7 114 57.9
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 4.0e-29 131.7 126 55.6
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 5.3e-29 131.3 118 57.6
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 6.9e-29 131.0 113 59.3
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 2.0e-28 129.4 128 51.6
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 3.4e-28 128.6 131 54.2
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.9e-27 125.6 130 50.0
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 4.9e-27 124.8 119 55.5
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 6.4e-27 124.4 128 53.1
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.4e-26 123.2 128 52.3
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 1.9e-26 122.9 127 52.0
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 4.2e-26 121.7 121 54.5
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 4.2e-26 121.7 129 51.2
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 3.5e-25 118.6 129 48.8
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 1.0e-24 117.1 128 50.0
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 1.3e-24 116.7 105 58.1
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 1.9e-23 112.8 121 51.2
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 1.9e-23 112.8 119 50.4
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 1.9e-23 112.8 128 48.4
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 4.3e-23 111.7 117 49.6
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 4.3e-23 111.7 126 50.0
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 5.6e-23 111.3 128 45.3
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 1.3e-22 110.2 118 50.0
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 1.3e-22 110.2 128 48.4
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 2.8e-22 109.0 127 48.8
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 1.8e-21 106.3 107 53.3
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 1.2e-20 103.6 118 48.3
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 3.4e-20 102.1 119 48.7
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.4e-20 102.1 130 43.1
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 1.0e-19 100.5 127 44.1
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 1.3e-19 100.1 118 48.3
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 2.2e-19 99.4 118 47.5
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 4.9e-19 98.2 129 43.4
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 6.5e-19 97.8 118 46.6
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 8.4e-19 97.4 118 46.6
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 8.4e-19 97.4 116 46.6
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.7e-17 92.4 110 43.6
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 6.0e-17 91.3 116 46.6
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.8e-16 89.7 56 75.0
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 1.1e-15 87.0 117 43.6
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 2.5e-15 85.9 117 42.7
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 2.5e-15 85.9 117 42.7
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 2.5e-15 85.9 117 42.7
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 2.5e-15 85.9 117 42.7
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 3.3e-15 85.5 128 41.4
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 5.7e-15 84.7 117 41.9
Sabra06G0123900 Salix brachista HOM05D003621 ORTHO05D004259 2.1e-14 82.8 66 65.2
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.1e-13 80.5 75 53.3
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 2.0e-12 76.3 116 39.7
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 2.0e-12 76.3 116 39.7
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.4e-12 75.5 106 38.7
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 3.4e-12 75.5 118 36.4
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 9.3e-10 67.4 119 36.1
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.2e-09 67.0 123 35.0
CDE02G1223 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 3.5e-09 65.5 38 73.7
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.6e-09 65.1 102 35.3
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.3e-08 62.8 130 32.3
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 2.3e-08 62.8 37 75.7
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 3.7e-06 55.5 63 46.0
Cre13.g573550 Chlamydomonas reinhardtii HOM05D001789 ORTHO05D043802 8.2e-06 54.3 138 33.3
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 8.2e-06 54.3 37 59.5


User provided reference genes

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