Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 4.3e-101 371.3 188 100.0
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 5.8e-37 158.3 189 51.9
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 1.5e-32 143.7 183 49.2
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 4.3e-32 142.1 196 51.0
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 8.6e-25 117.9 161 49.7
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 3.3e-24 115.9 188 41.5
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 4.3e-24 115.5 184 43.5
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 5.6e-24 115.2 196 41.8
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.6e-23 113.6 190 43.2
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 2.1e-23 113.2 160 47.5
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 6.2e-23 111.7 183 41.5
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 8.1e-23 111.3 192 42.2
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.8e-22 110.2 194 42.3
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 4.0e-22 109.0 180 40.6
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 5.2e-22 108.6 194 41.2
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 6.9e-22 108.2 190 43.2
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 4.4e-21 105.5 194 41.8
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 4.4e-21 105.5 165 43.6
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 4.4e-21 105.5 190 42.1
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 5.8e-21 105.1 191 41.9
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 7.6e-21 104.8 190 43.7
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 7.6e-21 104.8 190 43.2
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 9.9e-21 104.4 155 43.9
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 3.8e-20 102.4 190 41.1
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 4.9e-20 102.1 193 38.9
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 4.9e-20 102.1 161 46.6
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 8.4e-20 101.3 188 41.5
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.4e-19 100.5 186 41.4
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.9e-19 100.1 165 45.5
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 5.4e-19 98.6 200 41.0
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 9.3e-19 97.8 185 40.0
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 2.1e-18 96.7 194 40.7
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 2.7e-18 96.3 191 36.6
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 3.5e-18 95.9 190 41.6
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.5e-18 95.9 192 38.0
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 6.0e-18 95.1 188 43.1
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 6.0e-18 95.1 180 37.2
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.3e-17 94.0 192 40.6
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 1.7e-17 93.6 179 39.1
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 2.3e-17 93.2 164 37.8
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.0e-17 92.8 163 41.7
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.9e-17 92.4 195 41.0
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 5.1e-17 92.0 198 39.4
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 5.1e-17 92.0 181 36.5
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 1.1e-16 90.9 203 40.4
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 2.5e-16 89.7 190 38.4
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 3.3e-16 89.4 194 41.2
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 3.3e-16 89.4 126 45.2
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 3.3e-16 89.4 190 38.4
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 4.3e-16 89.0 190 40.0
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 2.8e-15 86.3 190 37.9
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 3.6e-15 85.9 195 37.9
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 6.2e-15 85.1 147 42.2
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 8.1e-15 84.7 194 36.6
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 1.8e-14 83.6 195 39.5
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 1.8e-14 83.6 190 37.9
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 4.0e-14 82.4 146 41.1
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 5.3e-14 82.0 189 37.0
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 2.6e-13 79.7 189 35.4
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 4.5e-13 79.0 193 36.8
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 5.8e-13 78.6 148 43.2
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 1.7e-12 77.0 185 34.1
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 2.9e-12 76.3 180 35.6
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 8.4e-12 74.7 169 36.7
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 8.4e-12 74.7 169 36.7
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 1.4e-11 73.9 102 46.1
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.4e-11 73.9 189 33.9
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 2.4e-11 73.2 171 34.5
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 2.4e-11 73.2 190 36.3
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 3.2e-11 72.8 98 50.0
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 4.2e-11 72.4 189 33.9
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.2e-11 72.4 116 43.1
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 4.2e-11 72.4 191 35.1
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 5.4e-11 72.0 171 33.9
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 1.2e-10 70.9 194 32.5
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 1.6e-10 70.5 160 37.5
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 1.6e-10 70.5 158 37.3
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.6e-10 70.5 169 36.1
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 2.1e-10 70.1 187 34.2
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 2.7e-10 69.7 196 36.7
TAR383G0638 Trochodendron aralioides HOM05D000726 ORTHO05D000799 1.0e-09 67.8 151 39.1
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.3e-09 67.4 116 42.2
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 1.3e-09 67.4 166 36.7
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-09 67.0 190 32.1
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 1.8e-09 67.0 78 50.0
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 3.0e-09 66.2 158 35.4
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 3.9e-09 65.9 194 34.5
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 3.9e-09 65.9 190 36.3
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 6.7e-09 65.1 159 34.6
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.5e-08 63.9 115 43.5
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 1.5e-08 63.9 190 33.7
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 7.4e-08 61.6 102 42.2
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 7.4e-08 61.6 71 56.3
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 9.6e-08 61.2 81 53.1
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 9.6e-08 61.2 196 31.1
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 1.6e-07 60.5 180 31.1
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 1.6e-07 60.5 190 34.2
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 4.8e-07 58.9 191 33.0
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 4.8e-07 58.9 102 41.2
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 6.2e-07 58.5 116 39.7
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.1e-07 58.2 88 43.2
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 1.4e-06 57.4 171 33.3
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 1.4e-06 57.4 171 33.3
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 1.4e-06 57.4 145 34.5
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-06 57.0 116 38.8
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 2.4e-06 56.6 84 38.1
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 2.4e-06 56.6 146 39.7
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 3.1e-06 56.2 159 34.6
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 4.0e-06 55.8 63 55.6
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 5.3e-06 55.5 130 33.8
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 6.9e-06 55.1 166 34.9


User provided reference genes

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