Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g39135 Nelumbo nucifera HOM05D000507 ORTHO05D037970 3.3e-32 141.0 65 100.0
CAN.G1131.1 Capsicum annuum HOM05D000507 ORTHO05D000416 5.7e-08 60.5 45 64.4
Solyc03g096990.4 Solanum lycopersicum HOM05D000507 ORTHO05D000416 9.7e-08 59.7 45 64.4
Sopen03g027740 Solanum pennellii HOM05D000507 ORTHO05D000416 9.7e-08 59.7 45 64.4
PGSC0003DMG400000565 Solanum tuberosum HOM05D000507 ORTHO05D000416 9.7e-08 59.7 45 64.4
PGSC0003DMG401003142 Solanum tuberosum HOM05D000507 ORTHO05D000416 9.7e-08 59.7 45 64.4
Nitab4.5_0000760g0050 Nicotiana tabacum HOM05D000507 ORTHO05D000416 2.2e-07 58.5 45 62.2
Nitab4.5_0000760g0060 Nicotiana tabacum HOM05D000507 ORTHO05D000416 2.2e-07 58.5 45 62.2
Nitab4.5_0003376g0080 Nicotiana tabacum HOM05D000507 ORTHO05D000416 2.2e-07 58.5 45 62.2
GSVIVG01024279001 Vitis vinifera HOM05D000507 ORTHO05D000416 3.7e-07 57.8 43 67.4
FAN03G1425 Fragaria x ananassa HOM05D000507 ORTHO05D000416 4.8e-07 57.4 39 69.2
Actinidia24634 Actinidia chinensis HOM05D000507 ORTHO05D037970 6.3e-07 57.0 50 54.0
CAN.G303.81 Capsicum annuum HOM05D000507 ORTHO05D000416 6.3e-07 57.0 34 73.5
Nitab4.5_0007174g0020 Nicotiana tabacum HOM05D000507 ORTHO05D000416 6.3e-07 57.0 46 60.9
CAN.G1131.9 Capsicum annuum HOM05D000507 ORTHO05D000416 8.2e-07 56.6 34 73.5
AUR62003504 Chenopodium quinoa HOM05D000507 ORTHO05D000416 8.2e-07 56.6 34 73.5
AUR62017806 Chenopodium quinoa HOM05D000507 ORTHO05D000416 8.2e-07 56.6 34 73.5
QL09p020366 Quercus lobata HOM05D000507 ORTHO05D000416 8.2e-07 56.6 34 73.5
CAN.G303.84 Capsicum annuum HOM05D000507 ORTHO05D000001 1.1e-06 56.2 34 73.5
Nn2g15004 Nelumbo nucifera HOM05D000507 ORTHO05D000416 1.1e-06 56.2 46 65.2
Nn2g15026 Nelumbo nucifera HOM05D000507 ORTHO05D000416 1.1e-06 56.2 46 65.2
QL09p020491 Quercus lobata HOM05D000507 ORTHO05D000416 1.1e-06 56.2 34 73.5
MD01G1204400 Malus domestica HOM05D000507 ORTHO05D000416 1.4e-06 55.8 33 72.7
Nn3g19207 Nelumbo nucifera HOM05D000507 ORTHO05D000416 1.4e-06 55.8 35 77.1
CAN.G303.83 Capsicum annuum HOM05D000507 ORTHO05D000416 1.8e-06 55.5 34 70.6
Nn1g09195 Nelumbo nucifera HOM05D000507 ORTHO05D000416 1.8e-06 55.5 47 61.7
EL10Ac6g14880 Beta vulgaris HOM05D000507 ORTHO05D000416 2.4e-06 55.1 34 70.6
EL10Ac6g14881 Beta vulgaris HOM05D000507 ORTHO05D000416 2.4e-06 55.1 34 70.6
EL10Ac6g15377 Beta vulgaris HOM05D000507 ORTHO05D000416 2.4e-06 55.1 34 70.6
EL10Ac6g15378 Beta vulgaris HOM05D000507 ORTHO05D000416 2.4e-06 55.1 34 70.6
FAN03G3308 Fragaria x ananassa HOM05D000507 ORTHO05D000416 2.4e-06 55.1 34 73.5
Nn1g09199 Nelumbo nucifera HOM05D000507 ORTHO05D017826 2.4e-06 55.1 46 60.9
TAR375G0930 Trochodendron aralioides HOM05D000507 ORTHO05D000416 2.4e-06 55.1 45 64.4
MD01G1203700 Malus domestica HOM05D000507 ORTHO05D000416 3.1e-06 54.7 33 72.7
Oeu034412.1 Olea europaea HOM05D000507 ORTHO05D000416 3.1e-06 54.7 45 62.2
Potri.008G099100 Populus trichocarpa HOM05D000507 ORTHO05D000416 3.1e-06 54.7 46 60.9
Ciclev10031236m.g Citrus clementina HOM05D000507 ORTHO05D000416 4.1e-06 54.3 34 76.5
Oeu034410.1 Olea europaea HOM05D000507 ORTHO05D000416 4.1e-06 54.3 45 60.0
Oeu034411.1 Olea europaea HOM05D000507 ORTHO05D000416 4.1e-06 54.3 45 60.0
PGR119G0767 Punica granatum HOM05D000507 ORTHO05D000416 4.1e-06 54.3 37 73.0
Sabra08G0074900 Salix brachista HOM05D000507 ORTHO05D000416 4.1e-06 54.3 46 60.9
arahy.Tifrunner.gnm1.ann1.70PRJ5 Arachis hypogaea HOM05D000507 ORTHO05D000416 5.3e-06 53.9 34 70.6
arahy.Tifrunner.gnm1.ann1.F34SP4 Arachis hypogaea HOM05D000507 ORTHO05D000416 5.3e-06 53.9 34 70.6
Cfa016087 Carpinus fangiana HOM05D000507 ORTHO05D000416 5.3e-06 53.9 45 62.2
Cfa016088 Carpinus fangiana HOM05D000507 ORTHO05D000416 5.3e-06 53.9 45 62.2
Cfa016090 Carpinus fangiana HOM05D000507 ORTHO05D000416 5.3e-06 53.9 45 62.2
Cfa016093 Carpinus fangiana HOM05D000507 ORTHO05D000416 5.3e-06 53.9 45 62.2
ClCG09G016850 Citrullus lanatus HOM05D000507 ORTHO05D000416 5.3e-06 53.9 48 58.3
Ciclev10031193m.g Citrus clementina HOM05D000507 ORTHO05D000416 5.3e-06 53.9 46 58.7
Haze_00358 Corylus avellana HOM05D000507 ORTHO05D000416 5.3e-06 53.9 45 62.2
CsaV3_2G036320 Cucumis sativus L. HOM05D000507 ORTHO05D000416 5.3e-06 53.9 34 67.6
Gohir.A11G302500 Gossypium hirsutum HOM05D000507 ORTHO05D000416 5.3e-06 53.9 45 55.6
Potri.015G006100 Populus trichocarpa HOM05D000507 ORTHO05D000416 5.3e-06 53.9 46 60.9
Thecc.05G226300 Theobroma cacao HOM05D000507 ORTHO05D000416 5.3e-06 53.9 46 60.9
TAR633G0801 Trochodendron aralioides HOM05D000507 ORTHO05D000416 5.3e-06 53.9 45 62.2
Ah.02g120330 Amaranthus hybridus HOM05D000507 ORTHO05D000416 6.9e-06 53.5 34 70.6
Cfa016085 Carpinus fangiana HOM05D000507 ORTHO05D000416 6.9e-06 53.5 45 62.2
MELO3C021851.2 Cucumis melo HOM05D000507 ORTHO05D000416 6.9e-06 53.5 48 58.3
CsaV3_2G036360 Cucumis sativus L. HOM05D000507 ORTHO05D000416 6.9e-06 53.5 48 58.3
Gohir.D11G317900 Gossypium hirsutum HOM05D000507 ORTHO05D000416 6.9e-06 53.5 45 55.6
Gorai.007G347700 Gossypium raimondii HOM05D000507 ORTHO05D000416 6.9e-06 53.5 45 55.6
Gorai.007G347900 Gossypium raimondii HOM05D000507 ORTHO05D000416 6.9e-06 53.5 45 55.6
Nn3g19204 Nelumbo nucifera HOM05D000507 ORTHO05D000416 6.9e-06 53.5 46 60.9
Potri.001G330501 Populus trichocarpa HOM05D000507 ORTHO05D000416 6.9e-06 53.5 46 58.7
PGR119G1576 Punica granatum HOM05D000507 ORTHO05D000416 6.9e-06 53.5 49 59.2
RcHm_v2.0_Chr1g0377691 Rosa chinensis HOM05D000507 ORTHO05D000416 6.9e-06 53.5 34 67.6
TAR016G0001 Trochodendron aralioides HOM05D000507 ORTHO05D000416 6.9e-06 53.5 45 57.8
GSVIVG01023560001 Vitis vinifera HOM05D000507 ORTHO05D000416 6.9e-06 53.5 33 72.7
AUR62017807 Chenopodium quinoa HOM05D000507 ORTHO05D000416 9.0e-06 53.1 45 57.8
Sabra16G0211800 Salix brachista HOM05D005629 ORTHO05D008000 9.0e-06 53.1 47 57.4


User provided reference genes

Program Settings