Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 6.7e-151 537.3 277 100.0
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.5e-97 359.4 219 81.3
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.5e-97 359.4 219 81.3
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.2e-96 357.1 219 80.8
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.6e-96 355.5 207 85.0
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 6.2e-96 354.8 225 79.1
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.2e-94 350.5 219 79.0
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 1.2e-94 350.5 207 84.5
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 2.0e-94 349.7 221 80.5
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 2.6e-94 349.4 219 78.5
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 9.9e-94 347.4 219 78.5
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.7e-93 346.7 221 79.6
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 6.4e-93 344.7 207 82.1
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.1e-92 344.0 217 77.9
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.9e-92 343.2 219 78.5
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.1e-91 339.7 220 79.1
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.7e-91 339.3 244 71.7
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 3.5e-91 339.0 220 78.6
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 6.0e-91 338.2 209 79.9
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 6.0e-91 338.2 219 76.3
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 6.0e-91 338.2 219 76.3
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 7.8e-91 337.8 220 78.6
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 7.8e-91 337.8 218 76.1
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 2.3e-90 336.3 218 77.1
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 3.0e-90 335.9 207 80.2
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.0e-90 335.9 212 79.7
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 6.6e-90 334.7 211 79.1
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 6.6e-90 334.7 215 78.6
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.1e-89 334.0 209 78.9
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 1.9e-89 333.2 207 80.7
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.9e-89 333.2 219 76.7
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.9e-89 333.2 216 76.4
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.9e-89 333.2 213 77.5
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.9e-89 333.2 212 78.8
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 3.3e-89 332.4 216 77.3
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 4.3e-89 332.0 211 79.1
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.3e-89 332.0 217 77.0
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 7.3e-89 331.3 230 73.5
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.3e-88 330.5 206 81.6
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.6e-88 330.1 208 77.4
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.6e-88 330.1 214 76.6
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 1.6e-88 330.1 216 75.5
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.6e-88 330.1 207 77.3
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 2.8e-88 329.3 220 75.5
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 3.6e-88 328.9 207 76.8
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 4.8e-88 328.6 220 74.1
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 6.2e-88 328.2 213 76.5
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 8.1e-88 327.8 207 76.3
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 8.1e-88 327.8 220 73.2
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.4e-87 327.0 215 75.3
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.8e-87 326.6 230 73.0
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 9.0e-87 324.3 207 77.8
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.2e-86 323.9 217 74.2
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.5e-86 323.6 211 74.4
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 2.0e-86 323.2 213 74.6
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 2.6e-86 322.8 213 74.2
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 5.8e-86 321.6 202 78.2
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 7.6e-86 321.2 218 73.4
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 9.9e-86 320.9 207 77.8
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 9.9e-86 320.9 207 77.3
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 9.9e-86 320.9 207 77.3
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.3e-85 320.5 239 69.5
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.3e-85 320.5 239 69.5
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.3e-85 320.5 192 81.2
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 2.9e-85 319.3 219 75.8
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 6.4e-85 318.2 212 75.5
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 8.4e-85 317.8 209 76.1
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.4e-84 317.0 211 73.9
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.9e-84 316.6 207 74.4
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 4.2e-84 315.5 206 74.8
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 5.4e-84 315.1 213 72.8
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 5.4e-84 315.1 213 72.8
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 7.1e-84 314.7 197 78.2
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.6e-83 313.5 239 66.1
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 3.5e-83 312.4 207 72.5
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 4.6e-83 312.0 207 73.4
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 4.6e-83 312.0 217 70.0
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 1.0e-82 310.8 246 66.7
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 5.1e-82 308.5 198 76.3
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.5e-81 307.0 192 79.2
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 2.5e-81 306.2 207 71.5
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 3.3e-81 305.8 206 72.3
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 1.6e-80 303.5 219 71.2
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.1e-80 303.1 220 73.2
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 6.2e-80 301.6 197 78.7
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.1e-79 300.8 239 64.9
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 6.9e-79 298.1 261 64.0
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.9e-77 292.0 183 77.0
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 4.2e-76 288.9 214 67.8
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 2.1e-75 286.6 206 68.9
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.0e-74 284.3 192 71.4
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 9.6e-73 277.7 207 69.1
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 1.3e-72 277.3 207 66.7
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.4e-71 273.9 209 66.5
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.4e-71 273.1 170 82.4
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.3e-69 267.3 220 67.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 2.5e-68 263.1 230 62.6
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 4.6e-67 258.8 196 69.9
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.0e-66 257.7 179 72.6
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 3.9e-66 255.8 173 75.1
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 8.2e-64 248.1 154 83.1
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 1.3e-61 240.7 217 59.0
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 3.6e-59 232.6 140 80.0
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.4e-55 219.9 183 65.6
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.4e-55 219.9 139 82.0
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 3.6e-51 206.1 140 76.4
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 2.2e-45 186.8 132 73.5
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-41 174.5 120 73.3
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.5e-41 174.1 113 75.2
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.9e-36 157.1 117 70.1
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 1.2e-35 154.5 137 62.8
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 5.2e-34 149.1 108 70.4
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 2.4e-31 140.2 204 39.2
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 7.0e-31 138.7 211 41.7
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.0e-29 134.8 85 70.6
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 3.8e-29 132.9 197 37.1
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 2.2e-21 107.1 101 59.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 3.8e-21 106.3 101 58.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 2.5e-20 103.6 81 67.9
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 7.2e-20 102.1 113 54.0
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 6.8e-18 95.5 71 57.7
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.2e-14 84.7 51 70.6
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 2.7e-06 57.0 46 63.0


User provided reference genes

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