Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g38932 Nelumbo nucifera HOM05D007010 ORTHO05D008591 1.2e-83 313.2 160 100.0
Nn8g38936 Nelumbo nucifera HOM05D007010 ORTHO05D008591 1.2e-83 313.2 160 100.0
Nn8g38933 Nelumbo nucifera HOM05D007010 ORTHO05D008591 6.6e-58 227.6 120 100.0
Hma1.2p1_0450F.1_g155640 Hydrangea macrophylla HOM05D007010 ORTHO05D008591 3.0e-26 122.5 127 57.5
TAR497G0007 Trochodendron aralioides HOM05D007010 ORTHO05D008591 3.7e-24 115.5 125 56.0
Ciclev10009901m.g Citrus clementina HOM05D007010 ORTHO05D008591 8.1e-24 114.4 128 51.6
TAR383G0702 Trochodendron aralioides HOM05D007010 ORTHO05D008591 2.4e-23 112.8 126 57.1
Thecc.09G051700 Theobroma cacao HOM05D007010 ORTHO05D008591 9.0e-23 110.9 138 51.4
Haze_03853 Corylus avellana HOM05D007010 ORTHO05D008591 2.0e-22 109.8 92 66.3
Gohir.A06G087901 Gossypium hirsutum HOM05D007010 ORTHO05D008591 3.4e-22 109.0 131 53.4
TWI63G1421 Tripterygium wilfordii HOM05D007010 ORTHO05D008591 1.3e-21 107.1 127 51.2
Eucgr.C02362 Eucalyptus grandis HOM05D007010 ORTHO05D008591 2.9e-21 105.9 123 52.8
Gohir.D06G088700 Gossypium hirsutum HOM05D007010 ORTHO05D008591 1.1e-20 104.0 131 52.7
THA.LOC104811249 Tarenaya hassleriana HOM05D007010 ORTHO05D008591 1.1e-20 104.0 132 50.0
Psat7g115760 Pisum sativum HOM05D007010 ORTHO05D008591 1.4e-20 103.6 127 48.0
QL05p000846 Quercus lobata HOM05D007010 ORTHO05D008591 5.5e-20 101.7 91 62.6
Medtr4g088585 Medicago truncatula HOM05D007010 ORTHO05D008591 7.1e-20 101.3 128 48.4
Sed0004842 Sechium edule HOM05D007010 ORTHO05D008591 9.3e-20 100.9 92 59.8
CAN.G208.75 Capsicum annuum HOM05D007010 ORTHO05D008591 2.1e-19 99.8 114 50.9
SGA_v2.0_scaffold52G19071 Striga asiatica HOM05D007010 ORTHO05D008591 3.5e-19 99.0 134 48.5
Potri.018G056000 Populus trichocarpa HOM05D007010 ORTHO05D008591 4.6e-19 98.6 126 48.4
Cpa.g.sc7.196 Carica papaya HOM05D007010 ORTHO05D008591 6.0e-19 98.2 131 50.4
Potri.006G232200 Populus trichocarpa HOM05D007010 ORTHO05D008591 7.9e-19 97.8 120 50.8
Solyc12g095940.1 Solanum lycopersicum HOM05D007010 ORTHO05D008591 7.9e-19 97.8 119 50.4
Sopen12g031840 Solanum pennellii HOM05D007010 ORTHO05D008591 7.9e-19 97.8 119 50.4
CsaV3_4G035530 Cucumis sativus L. HOM05D007010 ORTHO05D008591 1.0e-18 97.4 92 56.5
Lalb_Chr05g0218511 Lupinus albus HOM05D007010 ORTHO05D008591 1.0e-18 97.4 129 50.4
Hund03353 Selenicereus undatus HOM05D007010 ORTHO05D008591 1.0e-18 97.4 121 52.1
Oeu037327.1 Olea europaea HOM05D007010 ORTHO05D008591 1.3e-18 97.1 133 45.9
Atru.chr1.3280 Acer truncatum HOM05D007010 ORTHO05D008591 1.8e-18 96.7 127 52.0
QL05p001142 Quercus lobata HOM05D007010 ORTHO05D008591 3.0e-18 95.9 91 61.5
Oeu018653.1 Olea europaea HOM05D007010 ORTHO05D008591 3.9e-18 95.5 125 46.4
Glyma.07G198700 Glycine max HOM05D007010 ORTHO05D008591 8.7e-18 94.4 134 47.8
Lj7P280T30 Lonicera japonica HOM05D007010 ORTHO05D008591 1.5e-17 93.6 130 46.9
Sp7g31830 Schrenkiella parvula HOM05D007010 ORTHO05D008591 1.5e-17 93.6 123 48.0
PGSC0003DMG400029388 Solanum tuberosum HOM05D007010 ORTHO05D008591 2.5e-17 92.8 119 47.9
Sc09g0009690 Simmondsia chinensis HOM05D007010 ORTHO05D008591 4.3e-17 92.0 127 48.8
ClCG05G017750 Citrullus lanatus HOM05D007010 ORTHO05D008591 5.6e-17 91.7 94 55.3
CANSAT56G1710 Cannabis sativa HOM05D007010 ORTHO05D008591 1.3e-16 90.5 105 48.6
Sp6g31840 Schrenkiella parvula HOM05D007010 ORTHO05D008591 1.3e-16 90.5 124 49.2
Lj5g0011556 Lotus japonicus HOM05D007010 ORTHO05D008591 1.6e-16 90.1 129 48.1
Prupe.1G414500 Prunus persica HOM05D007010 ORTHO05D008591 1.1e-15 87.4 168 37.5
Ca_18571_v3 Cicer arietinum L. HOM05D007010 ORTHO05D008591 1.4e-15 87.0 130 46.9
Dinv27969 Davidia involucrata HOM05D007010 ORTHO05D008591 1.4e-15 87.0 110 51.8
TPR.G16317 Trifolium pratense HOM05D007010 ORTHO05D008591 1.4e-15 87.0 128 48.4
Lj4g0022512 Lotus japonicus HOM05D007010 ORTHO05D008591 5.3e-15 85.1 121 47.1
Atru.chr7.2115 Acer truncatum HOM05D007010 ORTHO05D008591 2.0e-14 83.2 130 42.3
Dinv23425 Davidia involucrata HOM05D000575 ORTHO05D004448 2.6e-14 82.8 109 52.3
PSO478G3947 Papaver somniferum HOM05D007010 ORTHO05D008591 2.6e-14 82.8 112 47.3
Phvul.002G230000 Phaseolus vulgaris HOM05D007010 ORTHO05D008591 2.6e-14 82.8 136 42.6
VMungo0251G3434 Vigna mungo HOM05D007010 ORTHO05D008591 2.6e-14 82.8 134 46.3
MD15G1061800 Malus domestica HOM05D007010 ORTHO05D008591 3.4e-14 82.4 156 37.2
MBI06_g20720_MAGBIO Magnolia biondii HOM05D007010 ORTHO05D008591 4.5e-14 82.0 125 48.8
Rhsim11G0045900 Rhododendron simsii HOM05D007010 ORTHO05D008591 5.8e-14 81.6 103 49.5
SalBow7G3522 Salvia bowleyana HOM05D007010 ORTHO05D008591 5.8e-14 81.6 133 42.9
ATR0697G019 Amborella trichopoda HOM05D007010 ORTHO05D008591 7.6e-14 81.3 147 43.5
Duzib168G1521 Durio zibethinus HOM05D007010 ORTHO05D008591 7.6e-14 81.3 97 53.6
Glyma.13G177700 Glycine max HOM05D007010 ORTHO05D008591 1.0e-13 80.9 128 45.3
Thhalv10014970m.g Eutrema salsugineum HOM05D007010 ORTHO05D008591 2.2e-13 79.7 133 42.1
TAR636G2520 Trochodendron aralioides HOM05D007010 ORTHO05D008591 2.2e-13 79.7 114 52.6
Cfa017938 Carpinus fangiana HOM05D007010 ORTHO05D008591 2.9e-13 79.3 126 46.8
FvH4_2g32140 Fragaria vesca HOM05D007010 ORTHO05D008591 3.8e-13 79.0 125 44.8
RcHm_v2.0_Chr6g0310541 Rosa chinensis HOM05D007010 ORTHO05D008591 3.8e-13 79.0 50 74.0
FAN24G3148 Fragaria x ananassa HOM05D007010 ORTHO05D008591 4.9e-13 78.6 125 44.8
Gorai.010G102500 Gossypium raimondii HOM05D007010 ORTHO05D008591 4.9e-13 78.6 117 50.4
Thhalv10027214m.g Eutrema salsugineum HOM05D007010 ORTHO05D008591 6.5e-13 78.2 126 42.9
Aa31LG3G15440 Aethionema arabicum HOM05D007010 ORTHO05D008591 8.4e-13 77.8 115 43.5
SalBow2G0398 Salvia bowleyana HOM05D007010 ORTHO05D008591 8.4e-13 77.8 131 38.9
SalBow2G1284 Salvia bowleyana HOM05D007010 ORTHO05D008591 8.4e-13 77.8 131 38.9
Lsat_1_v5_gn_9_89520 Lactuca sativa HOM05D007010 ORTHO05D008591 1.4e-12 77.0 123 41.5
PGR044G1826 Punica granatum HOM05D007010 ORTHO05D008591 1.4e-12 77.0 129 43.4
Migut.L00284 Erythranthe guttata HOM05D007010 ORTHO05D008591 4.2e-12 75.5 152 38.2
Manes.03G046700 Manihot esculenta HOM05D007010 ORTHO05D008591 4.2e-12 75.5 143 42.0
ECA240G3686 Erigeron canadensis HOM05D007010 ORTHO05D008591 2.1e-11 73.2 142 40.1
vmacro00158 Vaccinium macrocarpon HOM05D007010 ORTHO05D008591 2.7e-11 72.8 113 45.1
MD08G1044600 Malus domestica HOM05D007010 ORTHO05D008591 3.5e-11 72.4 153 38.6
Aqoxy3G02885 Aquilegia oxysepala HOM05D007010 ORTHO05D008591 6.1e-11 71.6 66 56.1
Sabra06G0180200 Salix brachista HOM05D007010 ORTHO05D008591 7.9e-11 71.2 110 45.5
Sabra06G0180800 Salix brachista HOM05D007010 ORTHO05D008591 7.9e-11 71.2 124 42.7
FAN27G2071 Fragaria x ananassa HOM05D007010 ORTHO05D008591 1.0e-10 70.9 128 39.8
Pp3c2_14930 Physcomitrium patens HOM05D007010 ORTHO05D008591 1.0e-10 70.9 146 37.0
BcaC01g00931 Brassica carinata HOM05D007010 ORTHO05D008591 1.8e-10 70.1 154 36.4
C03p86090 Brassica napus HOM05D007010 ORTHO05D008591 1.8e-10 70.1 154 36.4
BolC3t20897H Brassica oleracea HOM05D007010 ORTHO05D008591 1.8e-10 70.1 154 36.4
CiPaw.15G041400 Carya illinoinensis HOM05D007010 ORTHO05D008591 3.0e-10 69.3 112 42.9
AUR62009172 Chenopodium quinoa HOM05D007010 ORTHO05D008591 3.9e-10 68.9 109 42.2
Haze_18208 Corylus avellana HOM05D007010 ORTHO05D008591 5.1e-10 68.6 112 47.3
FAN20G1932 Fragaria x ananassa HOM05D007010 ORTHO05D008591 8.7e-10 67.8 107 49.5
Nitab4.5_0011306g0020 Nicotiana tabacum HOM05D007010 ORTHO05D008591 1.1e-09 67.4 116 44.0
BcaB03g11855 Brassica carinata HOM05D007010 ORTHO05D008591 1.5e-09 67.0 160 34.4
A08p17130 Brassica napus HOM05D007010 ORTHO05D008591 3.3e-09 65.9 160 33.8
Cre09.g395325 Chlamydomonas reinhardtii HOM05D007010 ORTHO05D008591 7.4e-09 64.7 91 45.1
FAN10G4050 Fragaria x ananassa HOM05D007010 ORTHO05D008591 7.4e-09 64.7 46 63.0
CBR_g70706 Chara braunii HOM05D007010 ORTHO05D008591 1.6e-08 63.5 135 36.3
SEGI_19332 Sequoiadendron giganteum HOM05D007010 ORTHO05D008591 4.8e-08 62.0 125 35.2
Nitab4.5_0000738g0150 Nicotiana tabacum HOM05D007010 ORTHO05D008591 8.2e-08 61.2 117 42.7
Mapoly0094s0032 Marchantia polymorpha HOM05D007010 ORTHO05D008591 1.4e-07 60.5 138 35.5
AL6G22510 Arabidopsis lyrata HOM05D007010 ORTHO05D008591 1.8e-07 60.1 135 34.1
CARHR201450 Cardamine hirsuta HOM05D007010 ORTHO05D008591 1.8e-07 60.1 134 38.1
Zm00001eb054150 Zea mays HOM05D007010 ORTHO05D008591 1.8e-07 60.1 112 42.0
DCAR_003084 Daucus carota HOM05D007010 ORTHO05D008591 9.0e-07 57.8 128 42.2
BraA08t33674Z Brassica rapa HOM05D007010 ORTHO05D008591 1.5e-06 57.0 120 34.2
HanXRQChr13g0410661 Helianthus annuus HOM05D007010 ORTHO05D008591 2.6e-06 56.2 129 37.2
SGA_v2.0_scaffold269G46243 Striga asiatica HOM05D007010 ORTHO05D008591 4.5e-06 55.5 124 40.3
CDE07G1901 Ceratophyllum demersum HOM05D007010 ORTHO05D008591 1.0e-05 54.3 112 36.6


User provided reference genes

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