Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 9.3e-55 216.5 98 100.0
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 3.5e-54 214.5 98 98.0
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 4.0e-50 201.1 98 90.8
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 5.3e-50 200.7 98 89.8
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 6.9e-50 200.3 98 90.8
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 1.5e-49 199.1 98 88.8
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.5e-49 199.1 98 89.8
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 3.4e-49 198.0 97 88.7
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 5.8e-49 197.2 98 88.8
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.3e-48 196.1 98 87.8
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 3.8e-48 194.5 98 86.7
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 3.8e-48 194.5 98 86.7
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 5.0e-48 194.1 98 84.7
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 5.0e-48 194.1 98 84.7
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 5.0e-48 194.1 98 85.7
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 8.4e-48 193.4 98 88.8
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 7.1e-47 190.3 98 83.7
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 7.1e-47 190.3 98 83.7
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 2.7e-46 188.3 96 85.4
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 6.1e-46 187.2 98 82.7
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 7.9e-46 186.8 94 88.3
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.0e-45 186.4 98 83.7
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 1.0e-45 186.4 96 83.3
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 1.3e-45 186.0 91 87.9
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 1.8e-45 185.7 90 90.0
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 1.8e-45 185.7 90 90.0
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 1.8e-45 185.7 90 90.0
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 3.9e-45 184.5 100 80.0
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 3.9e-45 184.5 100 80.0
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 3.9e-45 184.5 91 84.6
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 5.1e-45 184.1 91 85.7
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 5.1e-45 184.1 95 83.2
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 8.7e-45 183.3 98 82.7
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 8.7e-45 183.3 91 84.6
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.5e-44 182.6 98 81.6
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.5e-44 182.6 98 82.7
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.5e-44 182.6 91 83.5
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 1.9e-44 182.2 98 82.7
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 2.5e-44 181.8 91 84.6
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 3.3e-44 181.4 89 87.6
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 4.3e-44 181.0 91 82.4
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 4.3e-44 181.0 91 86.8
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 4.3e-44 181.0 101 79.2
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 5.7e-44 180.6 98 83.7
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 5.7e-44 180.6 98 79.6
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 7.4e-44 180.3 96 83.3
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 7.4e-44 180.3 94 81.9
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 7.4e-44 180.3 94 81.9
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 9.7e-44 179.9 95 81.1
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 9.7e-44 179.9 91 83.5
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 9.7e-44 179.9 94 83.0
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.3e-43 179.5 91 85.7
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 2.2e-43 178.7 91 85.7
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 2.2e-43 178.7 98 77.6
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 2.2e-43 178.7 91 83.5
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 2.2e-43 178.7 94 81.9
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 2.2e-43 178.7 94 81.9
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 2.8e-43 178.3 91 84.6
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 2.8e-43 178.3 91 85.7
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 3.7e-43 177.9 98 79.6
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.7e-43 177.9 94 80.9
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.7e-43 177.9 94 80.9
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 3.7e-43 177.9 97 79.4
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 6.3e-43 177.2 98 79.6
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 8.2e-43 176.8 91 82.4
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.1e-42 176.4 94 79.8
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.1e-42 176.4 94 79.8
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 1.4e-42 176.0 94 78.7
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 1.8e-42 175.6 98 76.5
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 1.8e-42 175.6 98 76.5
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 2.4e-42 175.3 90 83.3
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 2.4e-42 175.3 91 81.3
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 4.1e-42 174.5 89 84.3
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 5.3e-42 174.1 98 76.5
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 5.3e-42 174.1 90 81.1
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 6.9e-42 173.7 89 84.3
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 9.0e-42 173.3 91 83.5
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 9.0e-42 173.3 94 81.9
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 9.0e-42 173.3 98 78.6
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-41 172.9 94 79.8
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 1.2e-41 172.9 91 81.3
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.5e-41 172.6 90 81.1
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 2.0e-41 172.2 98 77.6
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 3.4e-41 171.4 98 77.6
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.4e-41 171.4 98 77.6
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 3.4e-41 171.4 98 75.5
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 4.5e-41 171.0 91 79.1
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 5.9e-41 170.6 95 77.9
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.0e-40 169.9 98 77.6
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.7e-40 169.1 113 69.0
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.9e-40 168.3 91 79.1
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.9e-40 168.3 91 79.1
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 2.9e-40 168.3 98 75.5
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 3.8e-40 167.9 91 80.2
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.0e-40 167.5 94 75.5
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 6.5e-40 167.2 91 74.7
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.5e-40 167.2 91 78.0
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.4e-39 166.0 111 69.4
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.9e-39 165.6 88 79.5
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 1.9e-39 165.6 91 78.0
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 1.2e-38 162.9 91 76.9
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 4.6e-38 161.0 91 75.8
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 3.0e-37 158.3 95 73.7
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 5.1e-37 157.5 78 84.6
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 6.7e-37 157.1 91 72.5
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 6.7e-37 157.1 94 75.5
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 1.5e-36 156.0 91 71.4
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 2.5e-36 155.2 91 73.6
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 3.3e-36 154.8 91 73.6
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 4.3e-36 154.5 91 73.6
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 5.7e-36 154.1 89 74.2
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 5.7e-36 154.1 89 74.2
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 5.7e-36 154.1 89 74.2
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.4e-36 153.7 82 80.5
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 7.4e-36 153.7 91 73.6
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 1.7e-35 152.5 89 73.0
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 1.7e-35 152.5 89 73.0
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 1.7e-35 152.5 89 73.0
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 1.7e-35 152.5 89 73.0
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 1.7e-35 152.5 89 73.0
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 2.8e-35 151.8 89 74.2
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.1e-34 149.8 105 66.7
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.8e-34 149.1 89 73.0
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-33 146.4 78 83.3
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.9e-32 141.7 100 63.0
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.9e-32 141.7 80 78.8
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 5.5e-31 137.5 74 78.4
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 3.9e-29 131.3 74 79.7
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 8.8e-29 130.2 67 83.6
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 9.7e-28 126.7 63 82.5
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 4.1e-26 121.3 62 85.5
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 5.9e-25 117.5 61 85.2
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 5.5e-23 110.9 61 82.0
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.8e-21 105.9 74 62.2
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 8.2e-19 97.1 71 57.7
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 2.0e-17 92.4 71 54.9
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 2.1e-14 82.4 61 62.3
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 8.8e-13 77.0 43 72.1
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 1.3e-08 63.2 57 43.9


User provided reference genes

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