Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 3.1e-104 381.7 182 100.0
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 5.4e-72 274.6 286 51.0
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 5.5e-69 264.6 286 50.3
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.2e-68 263.5 279 50.2
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 2.7e-68 262.3 284 48.9
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 4.7e-68 261.5 279 50.5
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 1.8e-67 259.6 286 47.9
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 4.0e-67 258.5 286 50.0
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.5e-66 256.5 284 48.9
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 4.4e-66 255.0 279 49.1
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 5.7e-66 254.6 281 49.5
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 7.5e-66 254.2 281 49.5
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 1.3e-65 253.4 286 49.7
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 1.3e-65 253.4 280 48.6
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 1.7e-65 253.1 258 51.9
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 2.2e-65 252.7 283 48.4
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 2.8e-65 252.3 280 49.3
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 3.7e-65 251.9 281 49.1
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 4.9e-65 251.5 287 48.1
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 6.3e-65 251.1 283 48.8
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 6.3e-65 251.1 288 47.2
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 8.3e-65 250.8 284 47.2
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 8.3e-65 250.8 277 47.3
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 1.1e-64 250.4 285 47.7
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 1.1e-64 250.4 285 47.7
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.8e-64 249.6 287 47.7
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 1.8e-64 249.6 287 47.7
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 1.8e-64 249.6 287 47.7
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 5.4e-64 248.1 268 49.6
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 7.0e-64 247.7 283 47.7
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 9.2e-64 247.3 280 48.2
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 1.2e-63 246.9 280 48.9
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.2e-63 246.9 284 49.6
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 1.6e-63 246.5 281 49.1
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.6e-63 246.5 273 50.2
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.6e-63 246.5 282 47.2
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 2.0e-63 246.1 270 49.6
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 2.0e-63 246.1 284 48.6
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 4.5e-63 245.0 285 47.7
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 4.5e-63 245.0 284 48.2
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 4.5e-63 245.0 263 48.7
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 5.9e-63 244.6 277 49.1
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 7.7e-63 244.2 277 48.7
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 2.3e-62 242.7 280 47.5
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.3e-62 242.7 280 47.5
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 2.9e-62 242.3 272 48.9
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.9e-62 242.3 280 47.5
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 3.8e-62 241.9 282 47.9
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.5e-61 240.0 274 49.3
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.5e-61 239.2 275 48.0
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 3.3e-61 238.8 287 46.3
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 4.3e-61 238.4 285 44.9
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 7.3e-61 237.7 283 46.6
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 9.5e-61 237.3 273 48.7
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.2e-60 236.9 275 46.9
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.2e-60 236.9 275 46.9
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 2.8e-60 235.7 283 45.9
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 4.7e-60 235.0 285 45.6
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 4.0e-59 231.9 285 45.6
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 1.2e-58 230.3 274 46.4
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.5e-58 229.9 282 44.7
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 3.4e-58 228.8 284 43.7
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 4.4e-58 228.4 279 43.4
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 5.7e-58 228.0 284 43.0
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 2.2e-57 226.1 288 43.4
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 2.2e-57 226.1 285 43.5
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 2.0e-55 219.5 280 42.9
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 9.5e-53 210.7 244 46.7
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 3.1e-51 205.7 259 44.8
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 3.1e-51 205.7 299 40.5
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.2e-51 204.9 280 42.9
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 1.1e-48 197.2 222 48.2
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 8.6e-46 187.6 275 41.5
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 4.3e-45 185.3 280 37.5
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 7.5e-42 174.5 294 36.1
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 1.3e-41 173.7 284 39.1
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 1.7e-41 173.3 237 43.0
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 2.9e-41 172.6 229 42.4
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 2.4e-40 169.5 110 70.9
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 9.2e-40 167.5 283 35.0
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 4.6e-39 165.2 235 41.7
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 4.6e-39 165.2 251 40.6
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 6.0e-39 164.9 108 71.3
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 5.1e-38 161.8 131 64.1
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 5.1e-38 161.8 131 64.1
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 6.6e-38 161.4 235 40.9
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 8.6e-38 161.0 105 70.5
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 4.3e-37 158.7 101 75.2
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 4.3e-37 158.7 131 62.6
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 7.3e-37 157.9 220 42.7
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 4.7e-36 155.2 132 58.3
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 4.7e-36 155.2 95 74.7
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 4.7e-36 155.2 131 59.5
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 6.2e-36 154.8 123 62.6
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 8.1e-36 154.5 112 62.5
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.1e-36 154.5 280 36.8
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.1e-35 154.1 280 36.8
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.0e-35 152.1 100 70.0
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 6.8e-35 151.4 106 66.0
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 7.6e-34 147.9 105 65.7
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.7e-33 146.7 101 69.3
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 1.1e-32 144.1 99 69.7
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.4e-32 141.7 94 69.1
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 2.7e-31 139.4 67 91.0
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 7.8e-31 137.9 81 75.3
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 1.7e-30 136.7 293 34.1
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 8.6e-30 134.4 81 74.1
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 3.3e-29 132.5 157 47.8
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 7.3e-29 131.3 287 29.6
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.7e-28 128.6 111 58.6
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 4.0e-27 125.6 64 82.8
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 1.2e-26 124.0 64 81.2
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 1.6e-23 113.6 69 69.6
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 1.3e-22 110.5 131 46.6
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 8.4e-17 91.3 83 55.4
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 1.8e-14 83.6 75 57.3
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 5.1e-14 82.0 51 72.5
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 2.1e-12 76.6 68 52.9
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 8.1e-12 74.7 118 40.7
SalBow6G0039 Salvia bowleyana HOM05D006517 ORTHO05D007886 1.3e-06 57.4 27 88.9
TWI09G1601 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 1.3e-06 57.4 102 30.4
Potri.004G064400 Populus trichocarpa HOM05D000088 ORTHO05D003056 2.3e-06 56.6 96 31.2
Thecc.06G161000 Theobroma cacao HOM05D000088 ORTHO05D003056 5.1e-06 55.5 93 30.1
Ah.15g094960 Amaranthus hybridus HOM05D000903 ORTHO05D000731 8.7e-06 54.7 159 27.0


User provided reference genes

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