Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 0.0e+00 2015.7 1018 100.0
Nn7g38492 Nelumbo nucifera HOM05D007594 ORTHO05D009607 0.0e+00 1294.3 677 98.8
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 2.3e-244 849.7 1112 47.3
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 4.5e-176 622.9 1108 39.8
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 5.1e-172 609.4 1098 39.8
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 4.5e-168 596.3 1134 38.2
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 1.1e-153 548.5 1091 37.7
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 1.3e-146 525.0 1090 37.5
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 6.3e-146 522.7 1098 36.6
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 4.1e-145 520.0 1066 36.3
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 4.2e-142 510.0 1097 36.6
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 9.8e-139 498.8 1051 35.6
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 5.9e-136 489.6 1058 36.0
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 5.9e-136 489.6 1118 35.4
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 1.6e-133 481.5 1079 35.6
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 1.2e-131 475.3 1060 35.6
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 3.7e-130 470.3 1100 33.9
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 4.1e-129 466.8 1075 36.3
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 7.3e-126 456.1 1063 34.3
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 1.9e-118 431.4 1090 33.5
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 9.5e-118 429.1 1139 34.0
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 2.1e-117 427.9 1083 34.4
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 2.8e-117 427.6 1083 34.3
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 8.0e-117 426.0 1097 32.7
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 1.1e-116 425.6 1096 33.6
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 1.1e-116 425.6 1108 31.9
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 6.8e-116 422.9 1028 35.8
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 1.3e-114 418.7 965 34.8
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 2.2e-114 417.9 1228 31.8
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 1.1e-113 415.6 1091 32.7
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 1.5e-110 405.2 1113 32.1
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 1.9e-110 404.8 1088 32.7
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 3.3e-110 404.1 1111 31.4
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 7.3e-110 402.9 830 37.1
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 1.2e-109 402.1 1083 31.8
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 2.1e-109 401.4 1096 32.3
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 3.1e-108 397.5 1096 32.0
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 3.1e-108 397.5 1014 33.5
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 5.2e-108 396.7 1146 32.1
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 1.3e-106 392.1 1264 30.1
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 1.4e-105 388.7 1090 31.5
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.9e-105 388.3 1174 31.2
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 2.4e-105 387.9 1108 32.9
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 4.1e-105 387.1 1063 31.3
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 5.4e-105 386.7 1151 31.9
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 1.2e-104 385.6 1014 32.7
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 1.3e-103 382.1 897 35.6
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 1.1e-102 379.0 868 36.2
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 1.5e-102 378.6 1070 31.3
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 4.7e-101 373.6 862 37.4
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 1.8e-100 371.7 860 35.9
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 4.0e-100 370.5 1009 31.8
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 6.8e-100 369.8 1110 32.0
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 2.9e-98 364.4 1121 31.6
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 3.8e-98 364.0 1008 32.0
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 3.0e-95 354.4 975 31.3
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 4.3e-94 350.5 1070 29.7
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 2.3e-87 328.2 1025 32.3
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 4.0e-84 317.4 1068 30.0
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 7.6e-83 313.2 1105 29.1
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 8.4e-82 309.7 1088 30.0
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 1.0e-79 302.8 566 37.1
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 3.4e-75 287.7 138 100.0
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 1.4e-73 282.3 936 31.0
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 7.9e-72 276.6 1047 27.9
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 3.0e-71 274.6 1046 27.2
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 4.8e-69 267.3 1017 28.7
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.4e-68 265.8 645 34.9
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 1.8e-68 265.4 996 28.7
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 1.7e-66 258.8 1043 26.4
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 1.1e-65 256.1 835 31.1
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 3.2e-65 254.6 584 33.2
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 6.7e-63 246.9 1030 28.3
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 4.3e-62 244.2 357 43.7
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 4.3e-62 244.2 372 40.6
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 5.7e-62 243.8 981 29.3
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 2.5e-54 218.4 251 46.2
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 1.4e-52 212.6 822 29.1
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 2.6e-51 208.4 801 27.7
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 2.0e-46 192.2 834 28.5
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 5.0e-42 177.6 833 27.4
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.5e-41 175.3 138 58.7
Sc11g0006290 Simmondsia chinensis HOM05D007594 ORTHO05D009607 1.5e-30 139.4 351 33.9
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 9.1e-28 130.2 100 60.0
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 6.1e-16 90.9 64 64.1
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 3.0e-15 88.6 55 72.7
AagrBONN_evm.TU.Sc2ySwM_368.2306 Anthoceros agrestis HOM05D007594 ORTHO05D009607 8.9e-15 87.0 158 34.8
Aqoxy1G00416 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 8.3e-13 80.5 89 48.3
ATR0445G001 Amborella trichopoda HOM05D007594 ORTHO05D009607 2.4e-12 79.0 167 38.9
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 2.0e-11 75.9 51 68.6
SEGI_25891 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 1.7e-10 72.8 374 25.7
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 3.8e-10 71.6 52 65.4
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 4.3e-09 68.2 51 60.8
COL.COLO4_04921 Corchorus olitorius HOM05D007594 ORTHO05D009607 8.0e-08 63.9 64 53.1
CBR_g49793 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-07 63.5 133 33.1
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 1.2e-06 60.1 53 50.9


User provided reference genes

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