Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn7g36019 Nelumbo nucifera HOM05D002402 ORTHO05D002633 1.5e-50 202.6 105 100.0
Sabra16G0050700 Salix brachista HOM05D002402 ORTHO05D002633 2.7e-07 58.9 75 48.0
Nn2g15656 Nelumbo nucifera HOM05D002402 ORTHO05D002633 4.5e-07 58.2 56 66.1
Ciclev10015454m.g Citrus clementina HOM05D002402 ORTHO05D002633 7.7e-07 57.4 79 49.4
MBI01_g01349_MAGBIO Magnolia biondii HOM05D002402 ORTHO05D002633 7.7e-07 57.4 74 51.4
CARHR041150 Cardamine hirsuta HOM05D002402 ORTHO05D002633 1.0e-06 57.0 81 44.4
PGR119G1859 Punica granatum HOM05D002402 ORTHO05D002633 1.0e-06 57.0 77 49.4
Aqoxy1G00036 Aquilegia oxysepala HOM05D002402 ORTHO05D002633 1.3e-06 56.6 70 48.6
AT1G51130 Arabidopsis thaliana HOM05D002402 ORTHO05D002633 1.3e-06 56.6 74 47.3
Peaxi162Scf00258g00424 Petunia axillaris HOM05D002402 ORTHO05D002633 1.3e-06 56.6 45 68.9
Aa31LG8G7520 Aethionema arabicum HOM05D002402 ORTHO05D002633 1.7e-06 56.2 56 57.1
ClCG03G013690 Citrullus lanatus HOM05D002402 ORTHO05D002633 1.7e-06 56.2 57 56.1
MELO3C015669.2 Cucumis melo HOM05D002402 ORTHO05D002633 1.7e-06 56.2 57 56.1
CsaV3_1G042360 Cucumis sativus L. HOM05D002402 ORTHO05D002633 1.7e-06 56.2 57 56.1
QL07p023587 Quercus lobata HOM05D002402 ORTHO05D002633 1.7e-06 56.2 64 51.6
AL1G58930 Arabidopsis lyrata HOM05D002402 ORTHO05D002633 2.3e-06 55.8 76 47.4
A05p19750 Brassica napus HOM05D002402 ORTHO05D002633 2.3e-06 55.8 74 45.9
BraA05t20882Z Brassica rapa HOM05D002402 ORTHO05D002633 2.3e-06 55.8 74 45.9
DCAR_019843 Daucus carota HOM05D002402 ORTHO05D002633 2.3e-06 55.8 75 42.7
FvH4_3g44140 Fragaria vesca HOM05D002402 ORTHO05D002633 2.3e-06 55.8 49 61.2
FAN11G2419 Fragaria x ananassa HOM05D002402 ORTHO05D002633 2.3e-06 55.8 49 61.2
QL01p009158 Quercus lobata HOM05D002402 ORTHO05D002633 2.3e-06 55.8 75 48.0
Aa31LG10G3430 Aethionema arabicum HOM05D002402 ORTHO05D002633 2.9e-06 55.5 81 43.2
FAN16G1723 Fragaria x ananassa HOM05D002402 ORTHO05D002633 2.9e-06 55.5 48 60.4
RcHm_v2.0_Chr5g0080471 Rosa chinensis HOM05D002402 ORTHO05D002633 2.9e-06 55.5 49 59.2
CSS0020725 Camellia sinensis var. sinensis HOM05D002402 ORTHO05D002633 3.8e-06 55.1 75 46.7
Thhalv10011541m.g Eutrema salsugineum HOM05D002402 ORTHO05D002633 3.8e-06 55.1 79 43.0
MD03G1016900 Malus domestica HOM05D002402 ORTHO05D002633 3.8e-06 55.1 56 57.1
Nitab4.5_0000324g0110 Nicotiana tabacum HOM05D002402 ORTHO05D002633 3.8e-06 55.1 85 45.9
TAR623G1535 Trochodendron aralioides HOM05D002402 ORTHO05D002633 3.8e-06 55.1 75 44.0
GSVIVG01025357001 Vitis vinifera HOM05D002402 ORTHO05D002633 3.8e-06 55.1 76 47.4
C05p33000 Brassica napus HOM05D002402 ORTHO05D002633 5.0e-06 54.7 79 43.0
FAN21G0262 Fragaria x ananassa HOM05D002402 ORTHO05D002633 5.0e-06 54.7 49 59.2
FAN25G0131 Fragaria x ananassa HOM05D002402 ORTHO05D002633 5.0e-06 54.7 49 59.2
Nitab4.5_0002689g0030 Nicotiana tabacum HOM05D002402 ORTHO05D002633 5.0e-06 54.7 76 48.7
TPR.G34231 Trifolium pratense HOM05D002402 ORTHO05D002633 5.0e-06 54.7 54 55.6
vmacro09113 Vaccinium macrocarpon HOM05D002402 ORTHO05D002633 5.0e-06 54.7 75 46.7
BcaB07g33560 Brassica carinata HOM05D002402 ORTHO05D002633 6.6e-06 54.3 79 41.8
A06p02650 Brassica napus HOM05D002402 ORTHO05D002633 6.6e-06 54.3 79 41.8
BraA06t23474Z Brassica rapa HOM05D002402 ORTHO05D002633 6.6e-06 54.3 79 41.8
Carub.0001s4004 Capsella rubella HOM05D002402 ORTHO05D002633 6.6e-06 54.3 56 55.4
Ca_11413_v3 Cicer arietinum L. HOM05D002402 ORTHO05D002633 6.6e-06 54.3 54 57.4
Cc06_g16010 Coffea canephora HOM05D002402 ORTHO05D002633 6.6e-06 54.3 82 46.3
Dinv14289 Davidia involucrata HOM05D002402 ORTHO05D002633 6.6e-06 54.3 75 42.7
Hma1.2p1_1169F.1_g263230 Hydrangea macrophylla HOM05D002402 ORTHO05D002633 6.6e-06 54.3 75 45.3
Medtr1g116900 Medicago truncatula HOM05D002402 ORTHO05D002633 6.6e-06 54.3 54 57.4
Sp1g37860 Schrenkiella parvula HOM05D002402 ORTHO05D002633 6.6e-06 54.3 79 41.8
Sed0018661 Sechium edule HOM05D002402 ORTHO05D002633 6.6e-06 54.3 77 41.6
Solyc10g078730.2 Solanum lycopersicum HOM05D002402 ORTHO05D002633 6.6e-06 54.3 49 59.2
Sopen10g029350 Solanum pennellii HOM05D002402 ORTHO05D002633 6.6e-06 54.3 49 59.2
PGSC0003DMG400011413 Solanum tuberosum HOM05D002402 ORTHO05D002633 6.6e-06 54.3 49 59.2
SGA_v2.0_scaffold69G23070 Striga asiatica HOM05D002402 ORTHO05D002633 6.6e-06 54.3 75 46.7
TWI34G1978 Tripterygium wilfordii HOM05D002402 ORTHO05D002633 6.6e-06 54.3 56 58.9
BcaC05g27367 Brassica carinata HOM05D002402 ORTHO05D002633 8.6e-06 53.9 74 44.6
BcaC08g43285 Brassica carinata HOM05D002402 ORTHO05D002633 8.6e-06 53.9 79 41.8
BcaNung05399 Brassica carinata HOM05D002402 ORTHO05D002633 8.6e-06 53.9 74 44.6
C06p06340 Brassica napus HOM05D002402 ORTHO05D002633 8.6e-06 53.9 79 41.8
BolC5t32027H Brassica oleracea HOM05D002402 ORTHO05D002633 8.6e-06 53.9 74 44.6
BolC6t35744H Brassica oleracea HOM05D002402 ORTHO05D002633 8.6e-06 53.9 79 41.8
Migut.J01828 Erythranthe guttata HOM05D002402 ORTHO05D002633 8.6e-06 53.9 48 62.5
Nitab4.5_0001538g0050 Nicotiana tabacum HOM05D002402 ORTHO05D002633 8.6e-06 53.9 49 59.2
Potri.003G212600 Populus trichocarpa HOM05D002402 ORTHO05D002633 8.6e-06 53.9 44 65.9
Potri.T028032 Populus trichocarpa HOM05D002402 ORTHO05D002633 8.6e-06 53.9 44 65.9
Hund21657 Selenicereus undatus HOM05D002402 ORTHO05D002633 8.6e-06 53.9 63 49.2
Thecc.05G170500 Theobroma cacao HOM05D002402 ORTHO05D002633 8.6e-06 53.9 64 50.0
TPR.G8891 Trifolium pratense HOM05D002402 ORTHO05D002633 8.6e-06 53.9 54 57.4
HPP92_015756 Vanilla planifolia HOM05D002402 ORTHO05D002633 8.6e-06 53.9 75 49.3


User provided reference genes

Program Settings