Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.3e-34 146.4 69 100.0
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.4e-25 118.2 57 94.7
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.1e-25 116.7 57 94.7
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 8.9e-20 99.8 64 76.6
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 8.9e-20 99.8 64 76.6
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 1.2e-19 99.4 67 70.1
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 1.4e-17 92.4 65 70.8
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 3.2e-17 91.3 57 75.4
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 7.1e-17 90.1 56 76.8
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 9.3e-17 89.7 67 64.2
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 1.2e-16 89.4 57 73.7
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 1.6e-16 89.0 72 61.1
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 2.1e-16 88.6 64 65.6
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 2.7e-16 88.2 73 60.3
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 2.7e-16 88.2 57 77.2
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 2.7e-16 88.2 57 77.2
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 4.6e-16 87.4 61 70.5
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 1.0e-15 86.3 65 61.5
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 1.7e-15 85.5 64 68.8
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 1.7e-15 85.5 57 68.4
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 2.3e-15 85.1 56 75.0
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 2.3e-15 85.1 66 65.2
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 2.3e-15 85.1 60 70.0
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 3.0e-15 84.7 55 76.4
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 3.0e-15 84.7 62 61.3
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 3.0e-15 84.7 62 61.3
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 3.0e-15 84.7 66 59.1
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 3.9e-15 84.3 70 60.0
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 6.6e-15 83.6 62 59.7
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 8.7e-15 83.2 69 59.4
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 1.1e-14 82.8 57 68.4
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.1e-14 82.8 58 63.8
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.1e-14 82.8 54 77.8
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.1e-14 82.8 56 73.2
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 1.5e-14 82.4 57 66.7
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 1.5e-14 82.4 62 64.5
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 1.5e-14 82.4 56 67.9
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.9e-14 82.0 56 67.9
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 1.9e-14 82.0 64 60.9
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.9e-14 82.0 72 56.9
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 2.5e-14 81.6 56 66.1
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 3.3e-14 81.3 57 70.2
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 3.3e-14 81.3 66 60.6
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 3.3e-14 81.3 66 62.1
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 4.3e-14 80.9 57 70.2
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 5.6e-14 80.5 58 67.2
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 5.6e-14 80.5 57 71.9
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 5.6e-14 80.5 63 60.3
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 7.3e-14 80.1 68 52.9
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 9.6e-14 79.7 66 59.1
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 9.6e-14 79.7 64 59.4
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 9.6e-14 79.7 51 78.4
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 9.6e-14 79.7 67 61.2
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 1.3e-13 79.3 76 51.3
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.3e-13 79.3 57 66.7
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.3e-13 79.3 70 54.3
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.6e-13 79.0 57 66.7
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 1.6e-13 79.0 57 64.9
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.1e-13 78.6 66 57.6
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 3.6e-13 77.8 56 67.9
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 4.8e-13 77.4 57 68.4
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 6.2e-13 77.0 57 64.9
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 8.1e-13 76.6 58 67.2
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 8.1e-13 76.6 62 62.9
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 8.1e-13 76.6 58 65.5
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.1e-12 76.3 57 63.2
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 1.4e-12 75.9 59 64.4
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 2.4e-12 75.1 58 65.5
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.4e-12 75.1 56 62.5
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.4e-12 75.1 56 62.5
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 3.1e-12 74.7 51 70.6
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 4.0e-12 74.3 51 72.5
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 5.3e-12 73.9 56 64.3
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 1.2e-11 72.8 56 58.9
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 1.2e-11 72.8 57 61.4
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.5e-11 72.4 64 54.7
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 3.4e-11 71.2 70 57.1
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 4.5e-11 70.9 56 60.7
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 5.8e-11 70.5 51 70.6
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 7.6e-11 70.1 52 65.4
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 1.3e-10 69.3 60 58.3
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.7e-10 68.9 53 62.3
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.7e-10 68.9 53 62.3
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.4e-10 67.0 32 90.6
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 2.4e-09 65.1 57 57.9
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 3.2e-09 64.7 49 57.1
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 5.4e-09 63.9 50 68.0
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 1.2e-08 62.8 69 44.9
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 1.2e-08 62.8 62 50.0
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.6e-08 62.4 63 46.0
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 1.0e-07 59.7 56 55.4
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 2.3e-07 58.5 52 55.8
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 6.7e-07 57.0 64 48.4
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 6.7e-07 57.0 60 45.0
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.9e-06 55.5 28 82.1
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 3.3e-06 54.7 62 48.4


User provided reference genes

Program Settings