Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g31489 Nelumbo nucifera HOM05D004936 ORTHO05D005977 3.6e-64 248.4 161 100.0
Nn6g34585 Nelumbo nucifera HOM05D004936 ORTHO05D005977 3.0e-58 228.8 154 98.1
Nn2g10980 Nelumbo nucifera HOM05D004936 ORTHO05D005977 1.4e-55 219.9 150 96.7
TAR636G1077 Trochodendron aralioides HOM05D004936 ORTHO05D005977 8.4e-45 184.1 150 69.3
QL01p039898 Quercus lobata HOM05D004936 ORTHO05D005977 2.4e-44 182.6 151 76.8
Haze_24392 Corylus avellana HOM05D004936 ORTHO05D005977 1.2e-43 180.3 151 76.2
GSVIVG01024670001 Vitis vinifera HOM05D004936 ORTHO05D005977 3.5e-43 178.7 150 66.7
Dinv28681 Davidia involucrata HOM05D004936 ORTHO05D005977 1.3e-42 176.8 148 76.4
ClCG03G000300 Citrullus lanatus HOM05D000089 ORTHO05D000104 3.0e-42 175.6 150 74.0
CiPaw.13G071600 Carya illinoinensis HOM05D004936 ORTHO05D005977 8.7e-42 174.1 150 69.3
VMungo1127G0545 Vigna mungo HOM05D004936 ORTHO05D005977 8.7e-42 174.1 135 77.0
Cfa011755 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.5e-41 173.3 149 75.8
Phvul.011G019700 Phaseolus vulgaris HOM05D004936 ORTHO05D005977 2.5e-41 172.6 135 76.3
ATR0691G226 Amborella trichopoda HOM05D004936 ORTHO05D005977 3.3e-41 172.2 131 80.9
CSS0031896 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 3.3e-41 172.2 148 64.2
CSS0046409 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 3.3e-41 172.2 148 64.2
Sed0012478 Sechium edule HOM05D004936 ORTHO05D005977 4.3e-41 171.8 150 74.0
Nitab4.5_0000570g0350 Nicotiana tabacum HOM05D004936 ORTHO05D005977 5.6e-41 171.4 142 73.2
Glyma.12G017200 Glycine max HOM05D004936 ORTHO05D005977 1.3e-40 170.2 136 75.0
Hma1.2p1_0146F.1_g065480 Hydrangea macrophylla HOM05D004936 ORTHO05D005977 1.3e-40 170.2 150 64.0
Oeu011630.1 Olea europaea HOM05D004936 ORTHO05D005977 1.3e-40 170.2 147 71.4
CDE06G1927 Ceratophyllum demersum HOM05D004936 ORTHO05D005977 1.6e-40 169.9 145 68.3
HPP92_003695 Vanilla planifolia HOM05D004936 ORTHO05D005977 2.8e-40 169.1 150 72.0
Lj3g0015200 Lotus japonicus HOM05D004936 ORTHO05D005977 3.7e-40 168.7 133 75.9
TPR.G39486 Trifolium pratense HOM05D004936 ORTHO05D005977 3.7e-40 168.7 135 75.6
Nitab4.5_0000158g0090 Nicotiana tabacum HOM05D004936 ORTHO05D005977 4.8e-40 168.3 148 71.6
Glyma.09G223900 Glycine max HOM05D004936 ORTHO05D005977 1.1e-39 167.2 136 74.3
Nitab4.5_0002493g0030 Nicotiana tabacum HOM05D004936 ORTHO05D005977 1.1e-39 167.2 148 70.9
CsaV3_1G036620 Cucumis sativus L. HOM05D004936 ORTHO05D005977 1.4e-39 166.8 150 62.0
Manes.15G096000 Manihot esculenta HOM05D004936 ORTHO05D005977 1.8e-39 166.4 150 64.7
Prupe.6G051100 Prunus persica HOM05D004936 ORTHO05D005977 1.8e-39 166.4 142 71.8
Medtr4g077950 Medicago truncatula HOM05D004936 ORTHO05D005977 2.4e-39 166.0 135 64.4
Psat7g170640 Pisum sativum HOM05D004936 ORTHO05D005977 2.4e-39 166.0 135 72.6
arahy.Tifrunner.gnm1.ann1.K3S5GW Arachis hypogaea HOM05D004936 ORTHO05D005977 4.0e-39 165.2 150 64.0
arahy.Tifrunner.gnm1.ann1.Z0D2FZ Arachis hypogaea HOM05D004936 ORTHO05D005977 4.0e-39 165.2 150 64.0
MELO3C020507.2 Cucumis melo HOM05D004936 ORTHO05D005977 4.0e-39 165.2 150 70.0
Medtr2g070380 Medicago truncatula HOM05D004936 ORTHO05D005977 5.3e-39 164.9 134 64.2
PGR044G1703 Punica granatum HOM05D004936 ORTHO05D005977 5.3e-39 164.9 149 69.8
Solyc11g068980.2 Solanum lycopersicum HOM05D004936 ORTHO05D005977 6.9e-39 164.5 142 69.0
Sopen11g027690 Solanum pennellii HOM05D004936 ORTHO05D005977 6.9e-39 164.5 142 69.0
Cpa.g.sc2.381 Carica papaya HOM05D004936 ORTHO05D005977 9.0e-39 164.1 145 67.6
PSO210G4578 Papaver somniferum HOM05D004936 ORTHO05D005977 9.0e-39 164.1 154 66.9
Sabra16G0174900 Salix brachista HOM05D004936 ORTHO05D005977 9.0e-39 164.1 148 58.8
CANSAT54G2258 Cannabis sativa HOM05D004936 ORTHO05D005977 1.2e-38 163.7 146 65.8
CAN.G3648.1 Capsicum annuum HOM05D004936 ORTHO05D005977 1.2e-38 163.7 132 72.7
CAN.G689.18 Capsicum annuum HOM05D004936 ORTHO05D005977 1.2e-38 163.7 132 72.7
PSO832G3733 Papaver somniferum HOM05D004936 ORTHO05D005977 1.2e-38 163.7 133 71.4
Actinidia23210 Actinidia chinensis HOM05D004936 ORTHO05D005977 1.5e-38 163.3 128 75.0
Eucgr.K02762 Eucalyptus grandis HOM05D004936 ORTHO05D005977 1.5e-38 163.3 150 61.3
PGSC0003DMG402019636 Solanum tuberosum HOM05D004936 ORTHO05D005977 1.5e-38 163.3 142 68.3
Ca_18959_v3 Cicer arietinum L. HOM05D000232 ORTHO05D000145 2.6e-38 162.5 156 64.1
Peaxi162Scf00624g00914 Petunia axillaris HOM05D004936 ORTHO05D005977 2.6e-38 162.5 150 66.0
Cc05_g03440 Coffea canephora HOM05D004936 ORTHO05D005977 4.5e-38 161.8 145 70.3
MD03G1061000 Malus domestica HOM05D004936 ORTHO05D005977 4.5e-38 161.8 149 69.8
Manes.03G100200 Manihot esculenta HOM05D004936 ORTHO05D005977 4.5e-38 161.8 150 63.3
Nitab4.5_0003484g0120 Nicotiana tabacum HOM05D004936 ORTHO05D005977 4.5e-38 161.8 129 75.2
TWI75G1184 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 4.5e-38 161.8 150 70.0
SGA_v2.0_scaffold39G15257 Striga asiatica HOM05D004936 ORTHO05D005977 5.8e-38 161.4 136 72.1
Lalb_Chr03g0024401 Lupinus albus HOM05D004936 ORTHO05D005977 2.2e-37 159.5 154 67.5
RcHm_v2.0_Chr5g0071211 Rosa chinensis HOM05D004936 ORTHO05D005977 2.9e-37 159.1 150 59.3
Potri.001G281200 Populus trichocarpa HOM05D004936 ORTHO05D005977 3.8e-37 158.7 134 64.2
Hund18959 Selenicereus undatus HOM05D004936 ORTHO05D005977 4.9e-37 158.3 129 65.1
Ciclev10029395m.g Citrus clementina HOM05D004936 ORTHO05D005977 6.5e-37 157.9 146 58.9
Aqoxy1G01790 Aquilegia oxysepala HOM05D004936 ORTHO05D005977 1.1e-36 157.1 150 58.7
Duzib084G0838 Durio zibethinus HOM05D004936 ORTHO05D005977 1.4e-36 156.8 133 68.4
Lj2A1091T51 Lonicera japonica HOM05D004936 ORTHO05D005977 1.4e-36 156.8 127 74.8
MSTRG.4026 Avicennia marina HOM05D004936 ORTHO05D005977 1.9e-36 156.4 146 66.4
TWI79G0082 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 1.9e-36 156.4 150 68.0
Atru.chr3.4141 Acer truncatum HOM05D004936 ORTHO05D005977 3.2e-36 155.6 150 56.0
THA.LOC104812175 Tarenaya hassleriana HOM05D004936 ORTHO05D005977 3.2e-36 155.6 138 60.1
Duzib068G0913 Durio zibethinus HOM05D004936 ORTHO05D005977 9.3e-36 154.1 152 53.9
DCAR_027925 Daucus carota HOM05D004936 ORTHO05D005977 2.1e-35 152.9 151 63.6
Potri.009G076400 Populus trichocarpa HOM05D004936 ORTHO05D005977 2.1e-35 152.9 149 58.4
Migut.G00331 Erythranthe guttata HOM05D004936 ORTHO05D005977 3.5e-35 152.1 143 56.6
Zm00001eb013690 Zea mays HOM05D004936 ORTHO05D005977 3.5e-35 152.1 124 61.3
Aa31LG7G2800 Aethionema arabicum HOM05D004936 ORTHO05D005977 4.6e-35 151.8 146 57.5
DCAR_018221 Daucus carota HOM05D004936 ORTHO05D005977 6.0e-35 151.4 147 64.6
Rhsim13G0065400 Rhododendron simsii HOM05D004936 ORTHO05D005977 6.0e-35 151.4 148 60.8
Lj1A128T43 Lonicera japonica HOM05D004936 ORTHO05D005977 7.9e-35 151.0 142 69.7
CiPaw.14G055600 Carya illinoinensis HOM05D004936 ORTHO05D005977 1.0e-34 150.6 119 76.5
Os03g0296300 Oryza sativa ssp. japonica HOM05D004936 ORTHO05D005977 1.3e-34 150.2 142 57.0
Thecc.03G057900 Theobroma cacao HOM05D004936 ORTHO05D005977 1.3e-34 150.2 148 64.2
Ah.15g096180 Amaranthus hybridus HOM05D004936 ORTHO05D005977 1.8e-34 149.8 138 59.4
SalBow5G1663 Salvia bowleyana HOM05D004936 ORTHO05D005977 1.8e-34 149.8 146 54.8
AUR62009688 Chenopodium quinoa HOM05D004936 ORTHO05D005977 3.0e-34 149.1 150 55.3
EL10Ac7g15900 Beta vulgaris HOM05D004936 ORTHO05D005977 3.9e-34 148.7 152 57.2
Gohir.A12G269500 Gossypium hirsutum HOM05D004936 ORTHO05D005977 5.1e-34 148.3 149 53.7
Carub.0001s1794 Capsella rubella HOM05D004936 ORTHO05D005977 6.7e-34 147.9 150 53.3
Lsat_1_v5_gn_2_60241 Lactuca sativa HOM05D004936 ORTHO05D005977 8.7e-34 147.5 133 59.4
AL1G30690 Arabidopsis lyrata HOM05D004936 ORTHO05D005977 1.1e-33 147.1 146 53.4
unitig_736.g22495 Utricularia gibba HOM05D004936 ORTHO05D005977 1.1e-33 147.1 149 55.0
AUR62001892 Chenopodium quinoa HOM05D004936 ORTHO05D005977 1.5e-33 146.7 150 56.0
HanXRQChr14g0439861 Helianthus annuus HOM05D004936 ORTHO05D005977 1.5e-33 146.7 147 55.8
Gorai.008G290300 Gossypium raimondii HOM05D004936 ORTHO05D005977 2.5e-33 146.0 149 53.0
C08p43440 Brassica napus HOM05D004936 ORTHO05D005977 3.3e-33 145.6 143 52.4
BolC8t51892H Brassica oleracea HOM05D004936 ORTHO05D005977 3.3e-33 145.6 143 52.4
Gohir.D12G270000 Gossypium hirsutum HOM05D004936 ORTHO05D005977 3.3e-33 145.6 149 53.0
Thhalv10008922m.g Eutrema salsugineum HOM05D004936 ORTHO05D005977 4.3e-33 145.2 146 53.4
Sp1g16280 Schrenkiella parvula HOM05D004936 ORTHO05D005977 4.3e-33 145.2 146 53.4
BcaC07g41334 Brassica carinata HOM05D004936 ORTHO05D005977 7.4e-33 144.4 142 53.5
A09p59990 Brassica napus HOM05D004936 ORTHO05D005977 7.4e-33 144.4 143 51.7
BraA09t41369Z Brassica rapa HOM05D004936 ORTHO05D005977 7.4e-33 144.4 143 51.7
vmacro02929 Vaccinium macrocarpon HOM05D004936 ORTHO05D005977 7.4e-33 144.4 192 46.4
BcaC07g38896 Brassica carinata HOM05D004936 ORTHO05D005977 1.3e-32 143.7 143 51.0
C08p18520 Brassica napus HOM05D004936 ORTHO05D005977 1.3e-32 143.7 143 51.0
BolC8t49484H Brassica oleracea HOM05D004936 ORTHO05D005977 1.3e-32 143.7 143 51.0
FvH4_3g39470 Fragaria vesca HOM05D004936 ORTHO05D005977 2.8e-32 142.5 127 56.7
FAN11G2192 Fragaria x ananassa HOM05D004936 ORTHO05D005977 2.8e-32 142.5 127 56.7
FAN21G3073 Fragaria x ananassa HOM05D004936 ORTHO05D005977 2.8e-32 142.5 127 56.7
A08p30450 Brassica napus HOM05D004936 ORTHO05D005977 3.7e-32 142.1 143 50.3
BraA08t34977Z Brassica rapa HOM05D004936 ORTHO05D005977 3.7e-32 142.1 143 50.3
FAN16G3562 Fragaria x ananassa HOM05D004936 ORTHO05D005977 3.7e-32 142.1 135 54.1
Oeu023392.2 Olea europaea HOM05D004936 ORTHO05D005977 1.1e-31 140.6 149 53.0
BcaB03g12974 Brassica carinata HOM05D004936 ORTHO05D005977 4.1e-31 138.7 146 48.6
BcaNung05441 Brassica carinata HOM05D004936 ORTHO05D005977 4.1e-31 138.7 146 48.6
COL.COLO4_31393 Corchorus olitorius HOM05D004936 ORTHO05D005977 1.5e-30 136.7 154 51.3
CARHR018890 Cardamine hirsuta HOM05D004936 ORTHO05D005977 2.6e-30 136.0 145 50.3
COL.COLO4_04994 Corchorus olitorius HOM05D000034 ORTHO05D000037 2.6e-30 136.0 149 51.7
ECA238G2024 Erigeron canadensis HOM05D004936 ORTHO05D005977 1.3e-29 133.7 136 55.9
SMO353G0176 Selaginella moellendorffii HOM05D004936 ORTHO05D005977 1.4e-28 130.2 142 47.2
FAN25G3861 Fragaria x ananassa HOM05D004936 ORTHO05D005977 1.9e-28 129.8 118 55.9
Sed0020346 Sechium edule HOM05D004936 ORTHO05D005977 4.6e-27 125.2 151 58.9
Sc12g0000320 Simmondsia chinensis HOM05D004936 ORTHO05D005977 1.5e-25 120.2 70 85.7
TAR633G2185 Trochodendron aralioides HOM05D004936 ORTHO05D005977 1.9e-25 119.8 121 71.1
Mapoly0036s0081 Marchantia polymorpha HOM05D004936 ORTHO05D005977 7.4e-25 117.9 149 47.7
Pp3c12_17590 Physcomitrium patens HOM05D004936 ORTHO05D005977 1.3e-24 117.1 121 52.1
SEGI_35825 Sequoiadendron giganteum HOM05D004936 ORTHO05D005977 4.8e-24 115.2 70 78.6
AagrBONN_evm.TU.Sc2ySwM_344.4538 Anthoceros agrestis HOM05D004936 ORTHO05D005977 1.8e-23 113.2 144 54.9
MD11G1063700 Malus domestica HOM05D004936 ORTHO05D005977 5.3e-23 111.7 112 57.1
TPR.G26511 Trifolium pratense HOM05D004936 ORTHO05D005977 3.4e-22 109.0 69 76.8
CANSAT21G2196 Cannabis sativa HOM05D004936 ORTHO05D005977 5.9e-22 108.2 68 75.0
Zm00001eb223780 Zea mays HOM05D004936 ORTHO05D005977 5.9e-22 108.2 68 75.0
AT3G10110 Arabidopsis thaliana HOM05D004936 ORTHO05D005977 1.3e-21 107.1 125 47.2
Nn6g32762 Nelumbo nucifera HOM05D004936 ORTHO05D005977 1.3e-21 107.1 55 100.0
Zm00001eb130910 Zea mays HOM05D004936 ORTHO05D005977 2.2e-21 106.3 68 73.5
CBR_g19040 Chara braunii HOM05D004936 ORTHO05D005977 2.3e-18 96.3 129 41.1
Dinv09657 Davidia involucrata HOM05D004936 ORTHO05D005977 2.2e-16 89.7 53 83.0
Nitab4.5_0001270g0210 Nicotiana tabacum HOM05D004936 ORTHO05D005977 7.7e-14 81.3 71 60.6
Dinv09658 Davidia involucrata HOM05D004936 ORTHO05D005977 1.3e-13 80.5 55 76.4
Cre01.g021050 Chlamydomonas reinhardtii HOM05D004936 ORTHO05D005977 1.9e-12 76.6 136 33.8
TPR.G39290 Trifolium pratense HOM05D004936 ORTHO05D005977 4.7e-11 72.0 38 84.2
MD11G1064100 Malus domestica HOM05D004936 ORTHO05D005977 8.0e-11 71.2 92 47.8
MD11G1064200 Malus domestica HOM05D004936 ORTHO05D005977 1.8e-10 70.1 38 86.8
TPR.G21432 Trifolium pratense HOM05D004936 ORTHO05D005977 1.1e-09 67.4 77 51.9
PRCOL_00001564 Prasinoderma coloniale HOM05D004936 ORTHO05D005977 3.3e-09 65.9 151 32.5
MD05G1160000 Malus domestica HOM05D004936 ORTHO05D005977 1.3e-08 63.9 38 71.1
MCO05G723 Micromonas commoda HOM05D004936 ORTHO05D005977 8.2e-08 61.2 122 32.0
Cfa023961 Carpinus fangiana HOM05D004936 ORTHO05D005977 5.3e-07 58.5 62 45.2
DCAR_027921 Daucus carota HOM05D004936 ORTHO05D005977 5.9e-06 55.1 44 59.1
Medtr2g070300 Medicago truncatula HOM05D004936 ORTHO05D005977 7.7e-06 54.7 27 88.9


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