Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g31022 Nelumbo nucifera HOM05D001775 ORTHO05D006205 9.1e-65 250.0 117 100.0
Dinv31976 Davidia involucrata HOM05D001775 ORTHO05D000295 2.3e-39 165.6 137 57.7
arahy.Tifrunner.gnm1.ann1.62LGBX Arachis hypogaea HOM05D001775 ORTHO05D006205 3.8e-39 164.9 168 50.0
Duzib041G0706 Durio zibethinus HOM05D001775 ORTHO05D006205 8.6e-39 163.7 117 64.1
arahy.Tifrunner.gnm1.ann1.NA36AX Arachis hypogaea HOM05D001775 ORTHO05D006205 3.3e-38 161.8 168 49.4
Ca_15392_v3 Cicer arietinum L. HOM05D001775 ORTHO05D006205 7.2e-38 160.6 168 48.8
Duzib116G0384 Durio zibethinus HOM05D001775 ORTHO05D006205 7.2e-38 160.6 133 57.9
GSVIVG01013411001 Vitis vinifera HOM05D001775 ORTHO05D006205 9.5e-38 160.2 168 50.0
Cfa014124 Carpinus fangiana HOM05D001775 ORTHO05D006205 1.6e-37 159.5 168 47.6
Hma1.2p1_0612F.1_g189000 Hydrangea macrophylla HOM05D001775 ORTHO05D006205 2.8e-37 158.7 169 52.1
Manes.18G002900 Manihot esculenta HOM05D001775 ORTHO05D006205 2.8e-37 158.7 168 51.2
Actinidia15517 Actinidia chinensis HOM05D001775 ORTHO05D006205 4.7e-37 157.9 167 49.1
Glyma.06G015300 Glycine max HOM05D001775 ORTHO05D006205 4.7e-37 157.9 168 48.8
Phvul.009G007300 Phaseolus vulgaris HOM05D001775 ORTHO05D006205 6.1e-37 157.5 168 48.2
QL02p015365 Quercus lobata HOM05D001775 ORTHO05D006205 8.0e-37 157.1 167 49.1
QL02p015396 Quercus lobata HOM05D001775 ORTHO05D006205 8.0e-37 157.1 167 49.1
CiPaw.07G134900 Carya illinoinensis HOM05D001775 ORTHO05D006205 1.0e-36 156.8 168 47.6
TAR628G0191 Trochodendron aralioides HOM05D001775 ORTHO05D006205 1.8e-36 156.0 167 49.1
DCAR_016792 Daucus carota HOM05D001775 ORTHO05D006205 2.3e-36 155.6 168 47.6
Thecc.08G064000 Theobroma cacao HOM05D001775 ORTHO05D006205 2.3e-36 155.6 168 48.2
CSS0024195 Camellia sinensis var. sinensis HOM05D001775 ORTHO05D006205 3.0e-36 155.2 168 47.6
Haze_22846 Corylus avellana HOM05D001775 ORTHO05D006205 8.9e-36 153.7 172 47.1
Cc10_g00340 Coffea canephora HOM05D001775 ORTHO05D006205 1.2e-35 153.3 168 45.2
Lalb_Chr11g0061401 Lupinus albus HOM05D001775 ORTHO05D006205 1.2e-35 153.3 168 48.2
Sed0015170 Sechium edule HOM05D001775 ORTHO05D006205 1.2e-35 153.3 168 46.4
ClCG08G009240 Citrullus lanatus HOM05D001775 ORTHO05D006205 1.5e-35 152.9 168 45.8
FAN08G0076 Fragaria x ananassa HOM05D001775 ORTHO05D006205 2.0e-35 152.5 168 46.4
Ciclev10002700m.g Citrus clementina HOM05D001775 ORTHO05D006205 3.4e-35 151.8 168 47.0
FvH4_5g25920 Fragaria vesca HOM05D001775 ORTHO05D006205 4.4e-35 151.4 168 45.8
FAN04G1208 Fragaria x ananassa HOM05D001775 ORTHO05D006205 4.4e-35 151.4 168 45.8
FAN13G2435 Fragaria x ananassa HOM05D001775 ORTHO05D006205 4.4e-35 151.4 168 45.8
CDE05G0091 Ceratophyllum demersum HOM05D001775 ORTHO05D006205 9.8e-35 150.2 133 52.6
RcHm_v2.0_Chr7g0216421 Rosa chinensis HOM05D001775 ORTHO05D006205 9.8e-35 150.2 168 46.4
Hund05085 Selenicereus undatus HOM05D001775 ORTHO05D006205 9.8e-35 150.2 168 45.8
Oeu016871.1 Olea europaea HOM05D001775 ORTHO05D006205 1.3e-34 149.8 170 47.1
TPR.G38180 Trifolium pratense HOM05D001775 ORTHO05D006205 1.7e-34 149.4 179 43.0
Cpa.g.sc26.151 Carica papaya HOM05D001775 ORTHO05D006205 4.9e-34 147.9 170 47.6
Gohir.A05G177800 Gossypium hirsutum HOM05D001775 ORTHO05D006205 6.3e-34 147.5 168 47.0
Gorai.009G186200 Gossypium raimondii HOM05D001775 ORTHO05D006205 8.3e-34 147.1 168 46.4
PSO675G2258 Papaver somniferum HOM05D001775 ORTHO05D006205 8.3e-34 147.1 168 45.2
Sp5g31560 Schrenkiella parvula HOM05D001775 ORTHO05D006205 1.1e-33 146.7 168 43.5
PSO541G5829 Papaver somniferum HOM05D001775 ORTHO05D006205 1.4e-33 146.4 168 44.6
CARHR069960 Cardamine hirsuta HOM05D001775 ORTHO05D006205 1.8e-33 146.0 168 43.5
Gohir.D05G181200 Gossypium hirsutum HOM05D001775 ORTHO05D006205 1.8e-33 146.0 168 46.4
SalBow7G0166 Salvia bowleyana HOM05D001775 ORTHO05D006205 2.4e-33 145.6 168 45.8
Thhalv10019232m.g Eutrema salsugineum HOM05D001775 ORTHO05D006205 4.1e-33 144.8 168 43.5
Sp1g18510 Schrenkiella parvula HOM05D001775 ORTHO05D006205 4.1e-33 144.8 168 44.0
TWI12G0153 Tripterygium wilfordii HOM05D001775 ORTHO05D006205 5.4e-33 144.4 168 44.6
C06p50600 Brassica napus HOM05D001775 ORTHO05D006205 7.0e-33 144.1 168 43.5
SGA_v2.0_scaffold133G34600 Striga asiatica HOM05D001775 ORTHO05D006205 9.2e-33 143.7 169 45.6
AL2G36510 Arabidopsis lyrata HOM05D001775 ORTHO05D006205 1.2e-32 143.3 168 41.7
BcaC08g47254 Brassica carinata HOM05D001775 ORTHO05D006205 2.7e-32 142.1 168 42.9
A07p42030 Brassica napus HOM05D001775 ORTHO05D006205 2.7e-32 142.1 168 42.9
BolC6t40085H Brassica oleracea HOM05D001775 ORTHO05D006205 2.7e-32 142.1 168 42.9
BraA07t31733Z Brassica rapa HOM05D001775 ORTHO05D006205 2.7e-32 142.1 168 42.9
AT1G76405 Arabidopsis thaliana HOM05D001775 ORTHO05D006205 3.5e-32 141.7 168 40.5
BcaC08g47138 Brassica carinata HOM05D001775 ORTHO05D006205 4.5e-32 141.4 168 42.3
THA.LOC104811999 Tarenaya hassleriana HOM05D001775 ORTHO05D006205 4.5e-32 141.4 168 42.9
CARHR021240 Cardamine hirsuta HOM05D001775 ORTHO05D006205 5.9e-32 141.0 168 44.0
Carub.0002s2331 Capsella rubella HOM05D001775 ORTHO05D006205 7.8e-32 140.6 168 41.1
Eucgr.F01803 Eucalyptus grandis HOM05D001775 ORTHO05D006205 7.8e-32 140.6 168 42.9
MD06G1005500 Malus domestica HOM05D001775 ORTHO05D006205 7.8e-32 140.6 168 42.9
CsaV3_6G031380 Cucumis sativus L. HOM05D001775 ORTHO05D006205 1.0e-31 140.2 168 42.3
Thhalv10008937m.g Eutrema salsugineum HOM05D001775 ORTHO05D006205 1.0e-31 140.2 168 43.5
Potri.005G255100 Populus trichocarpa HOM05D001775 ORTHO05D006205 1.3e-31 139.8 168 43.5
MSTRG.24916 Avicennia marina HOM05D001775 ORTHO05D006205 1.7e-31 139.4 168 44.0
A07p28510 Brassica napus HOM05D001775 ORTHO05D006205 1.7e-31 139.4 169 43.8
BraA07t30489Z Brassica rapa HOM05D001775 ORTHO05D006205 1.7e-31 139.4 169 43.8
MBI08_g29079_MAGBIO Magnolia biondii HOM05D001775 ORTHO05D006205 1.7e-31 139.4 170 45.9
THA.LOC104813743 Tarenaya hassleriana HOM05D001775 ORTHO05D006205 1.7e-31 139.4 168 42.9
Oeu019572.1 Olea europaea HOM05D001775 ORTHO05D006205 2.3e-31 139.0 170 44.1
Aa31LG4G6480 Aethionema arabicum HOM05D001775 ORTHO05D006205 2.5e-30 135.6 172 41.3
BcaB07g32074 Brassica carinata HOM05D001775 ORTHO05D006205 2.5e-30 135.6 168 42.9
Hund01795 Selenicereus undatus HOM05D001775 ORTHO05D006205 3.3e-30 135.2 168 41.7
AT1G20816 Arabidopsis thaliana HOM05D001775 ORTHO05D006205 5.6e-30 134.4 168 41.7
BolC6t38332H Brassica oleracea HOM05D001775 ORTHO05D006205 5.6e-30 134.4 168 42.9
Prupe.5G006800 Prunus persica HOM05D001775 ORTHO05D006205 5.6e-30 134.4 163 41.7
AL1G33820 Arabidopsis lyrata HOM05D001775 ORTHO05D006205 7.3e-30 134.0 168 41.7
BcaB02g07061 Brassica carinata HOM05D001775 ORTHO05D006205 9.5e-30 133.7 169 42.0
BcaC08g45531 Brassica carinata HOM05D001775 ORTHO05D006205 1.2e-29 133.3 168 42.3
C06p32060 Brassica napus HOM05D001775 ORTHO05D006205 1.2e-29 133.3 168 42.3
A06p16800 Brassica napus HOM05D001775 ORTHO05D009111 1.6e-29 132.9 168 41.7
BraA06t24788Z Brassica rapa HOM05D001775 ORTHO05D006205 1.6e-29 132.9 168 41.7
AUR62024107 Chenopodium quinoa HOM05D001775 ORTHO05D006205 1.6e-29 132.9 170 39.4
AUR62035157 Chenopodium quinoa HOM05D001775 ORTHO05D006205 1.6e-29 132.9 170 39.4
Medtr3g115990 Medicago truncatula HOM05D001775 ORTHO05D006205 1.6e-29 132.9 205 37.6
Peaxi162Scf00680g00415 Petunia axillaris HOM05D001775 ORTHO05D006205 1.6e-29 132.9 168 42.3
EL10Ac1g01895 Beta vulgaris HOM05D001775 ORTHO05D006205 2.8e-29 132.1 170 39.4
MELO3C026523.2 Cucumis melo HOM05D001775 ORTHO05D006205 2.8e-29 132.1 193 37.8
Carub.0001s2027 Capsella rubella HOM05D001775 ORTHO05D006205 3.6e-29 131.7 168 40.5
BcaC05g25983 Brassica carinata HOM05D001775 ORTHO05D006205 1.0e-28 130.2 168 40.5
C05p19360 Brassica napus HOM05D001775 ORTHO05D009111 1.0e-28 130.2 168 41.1
BolC5t30639H Brassica oleracea HOM05D001775 ORTHO05D006205 1.0e-28 130.2 168 41.1
Nitab4.5_0001756g0150 Nicotiana tabacum HOM05D001775 ORTHO05D006205 1.0e-28 130.2 169 42.0
Nitab4.5_0029491g0010 Nicotiana tabacum HOM05D001775 ORTHO05D006205 1.0e-28 130.2 169 42.0
CAN.G1330.2 Capsicum annuum HOM05D001775 ORTHO05D006205 4.0e-28 128.3 168 40.5
HPP92_015233 Vanilla planifolia HOM05D001775 ORTHO05D006205 4.0e-28 128.3 168 40.5
unitig_0.g2075 Utricularia gibba HOM05D001775 ORTHO05D006205 6.8e-28 127.5 189 39.2
ATR0807G198 Amborella trichopoda HOM05D001775 ORTHO05D006205 8.9e-28 127.1 169 43.8
Sabra05G0197600 Salix brachista HOM05D001775 ORTHO05D006205 1.5e-27 126.3 168 42.9
PGR083G1854 Punica granatum HOM05D001775 ORTHO05D006205 3.4e-27 125.2 184 39.7
TWI56G1014 Tripterygium wilfordii HOM05D001775 ORTHO05D006205 4.4e-27 124.8 201 36.8
Migut.C00377 Erythranthe guttata HOM05D001775 ORTHO05D006205 5.8e-27 124.4 168 39.9
HanXRQChr15g0492581 Helianthus annuus HOM05D001775 ORTHO05D006205 9.8e-27 123.6 189 36.0
HanXRQChr05g0144711 Helianthus annuus HOM05D001775 ORTHO05D006205 1.3e-26 123.2 196 35.2
Lsat_1_v5_gn_2_1320 Lactuca sativa HOM05D001775 ORTHO05D006205 1.3e-26 123.2 188 36.2
HanXRQChr14g0427901 Helianthus annuus HOM05D001775 ORTHO05D006205 2.9e-26 122.1 188 37.2
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 2.9e-26 122.1 152 44.7
Ah.00g001090 Amaranthus hybridus HOM05D001775 ORTHO05D006205 1.9e-25 119.4 172 37.2
vmacro21778 Vaccinium macrocarpon HOM05D001775 ORTHO05D006205 2.4e-25 119.0 205 34.6
Solyc04g082680.3 Solanum lycopersicum HOM05D001775 ORTHO05D006205 9.2e-25 117.1 168 38.1
Sopen04g036310 Solanum pennellii HOM05D001775 ORTHO05D006205 9.2e-25 117.1 168 38.1
PGSC0003DMG400009918 Solanum tuberosum HOM05D001775 ORTHO05D006205 3.5e-24 115.2 168 37.5
ECA232G0408 Erigeron canadensis HOM05D000593 ORTHO05D006205 6.0e-24 114.4 155 36.8
ECA238G0508 Erigeron canadensis HOM05D001775 ORTHO05D006205 1.7e-23 112.8 190 34.7
Manes.05G125900 Manihot esculenta HOM05D001775 ORTHO05D006205 3.0e-23 112.1 62 79.0
Lsat_1_v5_gn_9_41801 Lactuca sativa HOM05D001775 ORTHO05D006205 1.9e-22 109.4 182 34.1
FAN18G0260 Fragaria x ananassa HOM05D001775 ORTHO05D006205 3.3e-22 108.6 62 74.2
Lj4A6T36 Lonicera japonica HOM05D001775 ORTHO05D006205 3.3e-22 108.6 62 71.0
Mapoly0001s0026 Marchantia polymorpha HOM05D001775 ORTHO05D006205 1.6e-21 106.3 169 34.9
Pp3c16_8850 Physcomitrium patens HOM05D001775 ORTHO05D006205 2.1e-21 105.9 169 34.3
Rhsim06G0004200 Rhododendron simsii HOM05D001775 ORTHO05D006205 3.6e-21 105.1 237 31.2
CANSAT25G3735 Cannabis sativa HOM05D001775 ORTHO05D006205 8.9e-20 100.5 62 66.1
Atru.chr13.81 Acer truncatum HOM05D001775 ORTHO05D006205 5.8e-19 97.8 141 38.3
Os02g0832200 Oryza sativa ssp. japonica HOM05D001775 ORTHO05D006205 3.7e-18 95.1 186 33.3
Psat5g008840 Pisum sativum HOM05D001775 ORTHO05D006205 6.4e-18 94.4 151 37.7
COL.COLO4_36626 Corchorus olitorius HOM05D001775 ORTHO05D006205 5.4e-17 91.3 140 38.6
SMO117G0070 Selaginella moellendorffii HOM05D001775 ORTHO05D006205 2.7e-16 89.0 143 37.8
Pp3c5_19490 Physcomitrium patens HOM05D001775 ORTHO05D006205 4.6e-16 88.2 105 43.8
Zm00001eb259570 Zea mays HOM05D001775 ORTHO05D006205 1.3e-15 86.7 60 56.7
SMO114G0103 Selaginella moellendorffii HOM05D001775 ORTHO05D006205 3.0e-15 85.5 122 40.2
arahy.Tifrunner.gnm1.ann1.5GY58N Arachis hypogaea HOM05D001775 ORTHO05D006205 5.1e-15 84.7 55 70.9
Nitab4.5_0005347g0040 Nicotiana tabacum HOM05D001775 ORTHO05D006205 6.6e-15 84.3 52 67.3
PRCOL_00001546 Prasinoderma coloniale HOM05D001775 ORTHO05D006205 3.3e-14 82.0 169 32.0
MCO07G511 Micromonas commoda HOM05D001775 ORTHO05D006205 5.6e-14 81.3 171 30.4
Sc15g0004100 Simmondsia chinensis HOM05D001775 ORTHO05D006205 2.1e-13 79.3 90 44.4
CDE05G0488 Ceratophyllum demersum HOM05D001775 ORTHO05D006205 4.7e-13 78.2 145 32.4
VMungo1309G1483 Vigna mungo HOM05D001775 ORTHO05D006205 1.5e-11 73.2 157 31.2
arahy.Tifrunner.gnm1.ann1.3KDH9X Arachis hypogaea HOM05D001775 ORTHO05D006205 2.2e-10 69.3 41 68.3
AagrBONN_evm.TU.Sc2ySwM_362.1823 Anthoceros agrestis HOM05D001775 ORTHO05D006205 8.3e-10 67.4 121 31.4
AagrBONN_evm.TU.Sc2ySwM_344.4857 Anthoceros agrestis HOM05D001775 ORTHO05D006205 9.2e-09 63.9 142 28.2
CBR_g44541 Chara braunii HOM05D001775 ORTHO05D006205 4.6e-08 61.6 58 44.8
arahy.Tifrunner.gnm1.ann1.S8I99S Arachis hypogaea HOM05D001775 ORTHO05D006205 2.3e-07 59.3 53 60.4
HPP92_015234 Vanilla planifolia HOM05D001775 ORTHO05D006205 5.1e-07 58.2 109 33.9
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.9e-06 56.2 120 31.7


User provided reference genes

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