Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 5.9e-258 893.6 439 100.0
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 3.4e-197 691.8 440 77.7
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.2e-181 640.2 436 71.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 2.1e-178 629.4 430 69.3
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 9.9e-173 610.5 441 66.7
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.7e-172 609.8 432 68.1
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 5.4e-171 604.7 439 68.8
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.2e-170 603.6 441 67.8
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 4.6e-170 601.7 433 67.9
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 6.0e-170 601.3 434 68.0
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.3e-167 593.6 443 67.0
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 6.2e-167 591.3 433 67.4
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 3.1e-166 589.0 439 67.4
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.2e-165 587.0 431 68.4
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 5.8e-165 584.7 348 79.0
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 1.3e-164 583.6 439 64.2
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.8e-164 582.0 443 65.9
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 6.4e-164 581.3 435 64.8
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 8.4e-164 580.9 431 66.4
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.1e-163 580.5 451 63.0
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 2.5e-163 579.3 435 65.7
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 4.2e-163 578.6 434 65.2
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 2.7e-162 575.9 434 64.1
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 3.5e-162 575.5 435 64.6
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 6.0e-162 574.7 438 64.8
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 3.0e-161 572.4 435 63.9
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 3.0e-161 572.4 429 64.1
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 5.1e-161 571.6 437 65.7
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 6.7e-161 571.2 447 64.2
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.9e-160 569.7 434 62.0
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 2.5e-160 569.3 435 63.7
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.3e-159 567.0 438 64.8
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.1e-159 566.2 432 64.6
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 4.8e-159 565.1 433 65.1
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.1e-158 563.9 447 62.6
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.8e-158 563.1 441 61.7
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 4.0e-158 562.0 430 63.0
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 6.9e-158 561.2 429 63.9
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.4e-157 558.9 432 62.3
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 5.8e-157 558.1 436 64.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.3e-156 557.0 432 65.3
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.2e-156 556.2 431 64.3
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.9e-156 555.8 429 63.6
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 3.8e-156 555.4 429 64.3
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.5e-155 552.7 430 61.2
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 3.2e-155 552.4 435 62.3
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 4.2e-155 552.0 346 73.4
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 5.5e-155 551.6 430 63.7
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.6e-154 550.1 428 63.3
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 4.6e-154 548.5 425 67.5
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.0e-153 547.4 432 63.2
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 3.0e-153 545.8 441 62.1
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 6.7e-153 544.7 429 60.8
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 6.7e-153 544.7 434 60.4
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 1.1e-152 543.9 434 62.7
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 1.1e-152 543.9 434 62.7
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 1.1e-152 543.9 434 62.7
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.5e-152 543.5 434 62.7
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.3e-152 542.3 435 63.2
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 7.4e-152 541.2 439 60.4
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 9.7e-152 540.8 435 61.6
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 9.7e-152 540.8 432 62.3
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.3e-151 540.4 435 60.9
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.3e-151 540.4 432 62.0
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.6e-151 540.0 434 62.2
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.2e-151 539.7 427 61.4
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 2.8e-151 539.3 433 61.4
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 6.3e-151 538.1 436 61.2
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 1.1e-150 537.3 434 62.2
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.1e-150 537.3 443 59.6
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.4e-150 537.0 429 60.6
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.4e-150 537.0 432 63.2
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 2.4e-150 536.2 446 60.5
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 6.9e-150 534.6 432 62.5
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.2e-149 533.9 432 63.0
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 1.5e-149 533.5 396 66.2
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 2.6e-149 532.7 432 60.2
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.7e-148 530.0 435 59.8
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 3.8e-148 528.9 437 60.4
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 5.0e-148 528.5 438 61.6
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.1e-147 527.3 432 62.0
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.9e-147 526.6 436 60.6
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 2.5e-147 526.2 439 62.0
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 4.2e-147 525.4 430 60.5
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 4.2e-147 525.4 428 59.6
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 9.4e-147 524.2 428 63.8
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.6e-146 523.5 437 59.5
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 2.7e-146 522.7 436 59.6
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 2.7e-146 522.7 426 60.3
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 4.6e-146 521.9 436 59.4
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.3e-145 519.6 439 58.8
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.3e-145 519.6 439 58.8
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.3e-145 519.6 439 58.8
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.0e-145 519.2 432 61.8
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 3.9e-145 518.8 422 61.1
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 5.1e-145 518.5 390 63.3
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.1e-144 517.3 423 60.3
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.5e-144 516.2 438 61.6
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 4.3e-144 515.4 433 59.6
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 4.3e-144 515.4 425 61.9
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 4.3e-144 515.4 430 59.5
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 7.4e-144 514.6 457 56.7
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 3.7e-143 512.3 432 59.0
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-142 510.8 440 58.6
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-142 510.0 430 58.1
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-142 510.0 430 58.1
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 4.1e-142 508.8 432 58.3
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 5.3e-142 508.4 451 59.9
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 5.3e-142 508.4 435 60.9
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.5e-141 506.9 439 59.5
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-141 506.9 439 60.4
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-141 506.1 429 62.5
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 3.4e-141 505.8 436 57.3
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 5.9e-141 505.0 434 58.3
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 5.9e-141 505.0 347 67.1
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 7.7e-141 504.6 433 59.6
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 6.5e-140 501.5 433 56.8
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 2.5e-139 499.6 448 58.7
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 4.2e-139 498.8 344 66.6
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 5.5e-139 498.4 434 56.5
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 9.4e-139 497.7 437 57.4
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.1e-138 496.5 448 57.8
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 6.1e-138 495.0 350 65.4
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 7.9e-138 494.6 371 66.8
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-137 494.2 428 60.5
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-137 493.0 434 59.4
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.0e-136 490.0 344 64.8
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 9.7e-136 487.6 425 56.9
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.4e-134 483.0 427 54.3
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 3.1e-134 482.6 331 65.9
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.7e-132 476.9 430 56.0
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 9.4e-131 471.1 347 62.5
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.1e-126 456.1 430 54.9
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 7.0e-126 454.9 341 61.3
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 9.1e-126 454.5 289 70.6
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.7e-124 450.3 459 54.2
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.7e-117 426.4 343 58.9
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 3.8e-116 422.5 250 75.6
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.6e-114 417.2 415 51.3
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 3.4e-112 409.5 343 56.3
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.7e-112 408.7 373 57.1
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 4.8e-111 405.6 343 55.7
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 5.9e-109 398.7 433 50.8
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 9.5e-107 391.3 346 52.6
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 4.7e-106 389.0 249 69.5
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.0e-105 387.9 344 52.6
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.1e-102 377.9 304 58.2
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 3.5e-101 372.9 372 47.3
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.9e-101 372.1 346 52.3
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 2.8e-98 363.2 367 48.5
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 6.1e-98 362.1 280 66.1
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.2e-96 357.8 239 66.9
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 6.4e-95 352.1 241 66.4
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 9.2e-94 348.2 347 49.3
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.6e-93 347.4 338 50.6
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.2e-90 337.8 237 65.4
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.6e-90 337.4 346 49.1
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 6.4e-87 325.5 387 46.3
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.4e-86 323.6 348 47.7
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.2e-81 305.8 345 46.1
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.6e-80 303.5 237 58.2
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-78 297.7 346 42.8
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.2e-78 296.6 298 50.3
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 7.1e-78 295.4 392 40.8
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.3e-75 286.6 340 44.1
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.3e-75 286.2 340 42.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.6e-75 285.0 351 41.6
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-70 271.6 238 50.8
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.3e-68 264.6 345 40.3
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 3.5e-61 240.0 354 37.0
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 4.8e-42 176.4 149 61.7
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 5.0e-39 166.4 420 29.3
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.3e-34 151.8 154 50.6
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 5.3e-25 119.8 86 57.0
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.2e-22 110.5 114 43.9
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 3.6e-21 107.1 79 51.9
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.0e-20 105.5 133 51.1
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.3e-18 98.6 119 39.5
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.0e-15 89.0 100 40.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.4e-12 78.6 87 47.1
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.4e-09 67.8 44 79.5
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 8.5e-07 59.3 47 59.6


User provided reference genes

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