Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30871 Nelumbo nucifera HOM05D002325 ORTHO05D000336 1.7e-26 121.7 54 100.0
Dinv05030 Davidia involucrata HOM05D002325 ORTHO05D000336 7.2e-17 89.7 56 73.2
Nn8g38650 Nelumbo nucifera HOM05D002325 ORTHO05D000336 2.8e-16 87.8 46 87.0
TAR628G1557 Trochodendron aralioides HOM05D002325 ORTHO05D000336 1.8e-15 85.1 56 69.6
CSS0041796 Camellia sinensis var. sinensis HOM05D002325 ORTHO05D000336 4.0e-15 84.0 56 64.3
QL01p020530 Quercus lobata HOM05D002325 ORTHO05D000336 5.2e-15 83.6 56 66.1
Hma1.2p1_0579F.1_g182680 Hydrangea macrophylla HOM05D002325 ORTHO05D000336 3.4e-14 80.9 54 64.8
MBI06_g44271_MAGBIO Magnolia biondii HOM05D002325 ORTHO05D000336 5.7e-14 80.1 56 58.9
Gohir.A12G246000 Gossypium hirsutum HOM05D002325 ORTHO05D000336 7.5e-14 79.7 56 62.5
Gohir.D12G246650 Gossypium hirsutum HOM05D002325 ORTHO05D000336 1.7e-13 78.6 56 60.7
Gorai.008G264500 Gossypium raimondii HOM05D002325 ORTHO05D000336 1.7e-13 78.6 56 60.7
QL01p016384 Quercus lobata HOM05D002325 ORTHO05D000336 3.7e-13 77.4 56 60.7
COL.COLO4_14381 Corchorus olitorius HOM05D002325 ORTHO05D000336 8.3e-13 76.3 56 60.7
Cc02_g30110 Coffea canephora HOM05D002325 ORTHO05D000336 1.2e-11 72.4 56 55.4
Lj9C645T7 Lonicera japonica HOM05D002325 ORTHO05D000336 1.6e-11 72.0 56 58.9
MBI03_g05986_MAGBIO Magnolia biondii HOM05D002325 ORTHO05D000336 2.7e-11 71.2 56 55.4
Rhsim06G0197800 Rhododendron simsii HOM05D002325 ORTHO05D000336 2.7e-11 71.2 56 55.4
Nitab4.5_0000316g0290 Nicotiana tabacum HOM05D002325 ORTHO05D000336 1.3e-10 68.9 56 51.8
Nitab4.5_0001775g0010 Nicotiana tabacum HOM05D002325 ORTHO05D000336 1.3e-10 68.9 56 51.8
Lsat_1_v5_gn_1_100881 Lactuca sativa HOM05D002325 ORTHO05D000336 2.9e-10 67.8 56 53.6
GSVIVG01022415001 Vitis vinifera HOM05D002325 ORTHO05D000336 3.9e-10 67.4 56 53.6
HanXRQChr11g0346731 Helianthus annuus HOM05D002325 ORTHO05D000336 6.6e-10 66.6 56 50.0
Lsat_1_v5_gn_3_25721 Lactuca sativa HOM05D002325 ORTHO05D000336 6.6e-10 66.6 56 51.8
Aqoxy4G01475 Aquilegia oxysepala HOM05D002325 ORTHO05D000336 8.6e-10 66.2 56 51.8
Peaxi162Scf83466g00002 Petunia axillaris HOM05D002325 ORTHO05D000336 1.1e-09 65.9 56 50.0
HanXRQChr11g0341141 Helianthus annuus HOM05D002325 ORTHO05D000336 1.9e-09 65.1 56 51.8
PGSC0003DMG400006825 Solanum tuberosum HOM05D002325 ORTHO05D000336 2.5e-09 64.7 56 48.2
Os04g0448700 Oryza sativa ssp. japonica HOM05D002325 ORTHO05D000336 3.3e-09 64.3 56 50.0
Sopen01g035070 Solanum pennellii HOM05D002325 ORTHO05D000336 3.3e-09 64.3 56 48.2
Solyc01g088240.4 Solanum lycopersicum HOM05D002325 ORTHO05D000336 4.3e-09 63.9 56 48.2
vmacro22869 Vaccinium macrocarpon HOM05D002325 ORTHO05D000336 4.3e-09 63.9 56 50.0
Aqoxy6G00165 Aquilegia oxysepala HOM05D002325 ORTHO05D000336 1.2e-08 62.4 56 51.8
Lsat_1_v5_gn_4_30280 Lactuca sativa HOM05D002325 ORTHO05D000336 3.6e-08 60.8 56 48.2
PSO170G3082 Papaver somniferum HOM05D002325 ORTHO05D000336 3.6e-08 60.8 56 51.8
DCAR_031818 Daucus carota HOM05D002325 ORTHO05D000336 8.0e-08 59.7 56 44.6
PSO782G1953 Papaver somniferum HOM05D002325 ORTHO05D000336 1.0e-07 59.3 56 50.0
Nn7g38313 Nelumbo nucifera HOM05D002325 ORTHO05D000336 1.8e-07 58.5 45 71.1
CDE11G1179 Ceratophyllum demersum HOM05D002325 ORTHO05D000336 4.0e-07 57.4 56 48.2
ECA248G2216 Erigeron canadensis HOM05D002325 ORTHO05D000336 5.2e-07 57.0 56 48.2
SEGI_24003 Sequoiadendron giganteum HOM05D002325 ORTHO05D000336 1.2e-06 55.8 56 37.5
CDE05G0476 Ceratophyllum demersum HOM05D002325 ORTHO05D000336 1.5e-06 55.5 56 46.4
SEGI_41336 Sequoiadendron giganteum HOM05D002325 ORTHO05D000336 3.4e-06 54.3 56 35.7
HPP92_020648 Vanilla planifolia HOM05D002325 ORTHO05D000336 3.4e-06 54.3 43 55.8


User provided reference genes

Program Settings