Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30537 Nelumbo nucifera HOM05D004288 ORTHO05D004997 1.4e-117 426.4 238 100.0
Nn1g04602 Nelumbo nucifera HOM05D004288 ORTHO05D004997 5.6e-21 105.5 148 43.2
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 4.8e-20 102.4 150 41.3
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.8e-19 100.5 150 43.3
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 1.9e-16 90.5 148 39.9
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 4.2e-16 89.4 153 41.2
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.5e-15 86.3 151 37.7
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 7.9e-15 85.1 153 39.2
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 1.0e-14 84.7 147 38.8
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 1.0e-14 84.7 152 37.5
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 1.0e-14 84.7 146 39.7
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 5.1e-14 82.4 146 37.7
TAR636G2516 Trochodendron aralioides HOM05D004288 ORTHO05D004997 5.1e-14 82.4 130 40.8
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 6.7e-14 82.0 152 37.5
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 8.7e-14 81.6 145 37.2
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 1.1e-13 81.3 153 39.9
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 4.3e-13 79.3 154 38.3
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 5.6e-13 79.0 146 37.7
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 5.6e-13 79.0 146 37.7
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 5.6e-13 79.0 155 36.1
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 7.4e-13 78.6 151 36.4
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 1.3e-12 77.8 148 36.5
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 8.1e-12 75.1 148 33.8
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 8.1e-12 75.1 158 37.3
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 1.1e-11 74.7 153 35.3
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 3.1e-11 73.2 150 34.0
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 5.3e-11 72.4 151 36.4
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 5.3e-11 72.4 147 35.4
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 1.2e-10 71.2 151 33.1
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 1.2e-10 71.2 150 32.0
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 1.2e-10 71.2 146 34.2
GSVIVG01037855001 Vitis vinifera HOM05D004288 ORTHO05D004997 1.0e-09 68.2 146 36.3
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 1.3e-09 67.8 163 30.1
TAR381G1169 Trochodendron aralioides HOM05D004288 ORTHO05D004997 2.9e-09 66.6 118 38.1
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.8e-09 66.2 146 32.9
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 3.8e-09 66.2 151 31.8
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 1.1e-08 64.7 154 32.5
COL.COLO4_28524 Corchorus olitorius HOM05D004288 ORTHO05D004997 1.9e-08 63.9 111 39.6
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 2.5e-08 63.5 145 35.2
Gohir.D06G020400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 2.5e-08 63.5 145 36.6
Gorai.010G024900 Gossypium raimondii HOM05D004288 ORTHO05D004997 4.2e-08 62.8 145 35.9
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 4.2e-08 62.8 123 37.4
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 5.5e-08 62.4 117 36.8
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 5.5e-08 62.4 137 34.3
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 9.3e-08 61.6 162 30.2
Dinv39247 Davidia involucrata HOM05D004288 ORTHO05D004997 1.2e-07 61.2 152 32.9
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 1.6e-07 60.8 125 36.0
Rhsim07G0221200 Rhododendron simsii HOM05D004288 ORTHO05D004997 3.5e-07 59.7 181 32.0
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 4.6e-07 59.3 115 33.0
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 4.6e-07 59.3 105 35.2
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 6.0e-07 58.9 153 34.0
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 6.0e-07 58.9 149 33.6
PSO541G1266 Papaver somniferum HOM05D004288 ORTHO05D004997 6.0e-07 58.9 121 35.5
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 7.9e-07 58.5 142 35.2
Phvul.001G026400 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 1.3e-06 57.8 150 32.0
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 1.8e-06 57.4 110 32.7
ClCG05G020460 Citrullus lanatus HOM05D004288 ORTHO05D004997 1.8e-06 57.4 109 34.9
VMungo0647G1919 Vigna mungo HOM05D004288 ORTHO05D004997 2.3e-06 57.0 152 29.6
Ah.05g167180 Amaranthus hybridus HOM05D004288 ORTHO05D004997 3.9e-06 56.2 116 33.6
RcHm_v2.0_Chr6g0309361 Rosa chinensis HOM05D004288 ORTHO05D004997 3.9e-06 56.2 149 28.9
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 5.1e-06 55.8 160 32.5
CiPaw.13G085100 Carya illinoinensis HOM05D004288 ORTHO05D004997 6.7e-06 55.5 110 31.8
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 8.7e-06 55.1 147 31.3
SalBow7G4748 Salvia bowleyana HOM05D004288 ORTHO05D004997 8.7e-06 55.1 100 35.0
THA.LOC104801605 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 8.7e-06 55.1 145 30.3


User provided reference genes

Program Settings