Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30341 Nelumbo nucifera HOM05D000393 ORTHO05D000275 2.5e-53 211.8 105 100.0
Nn7g35991 Nelumbo nucifera HOM05D000393 ORTHO05D000275 1.7e-41 172.6 102 86.3
Nn2g15708 Nelumbo nucifera HOM05D000393 ORTHO05D000275 3.1e-32 141.7 102 69.6
Nn5g28011 Nelumbo nucifera HOM05D000393 ORTHO05D000275 2.1e-28 129.0 79 77.2
Nn5g28009 Nelumbo nucifera HOM05D000393 ORTHO05D000275 3.3e-26 121.7 72 80.6
TAR633G1368 Trochodendron aralioides HOM05D000393 ORTHO05D000275 2.6e-18 95.5 102 57.8
TAR369G0902 Trochodendron aralioides HOM05D000393 ORTHO05D000275 2.2e-17 92.4 102 54.9
MBI13_g20488_MAGBIO Magnolia biondii HOM05D000393 ORTHO05D000275 3.7e-17 91.7 105 57.1
Aqoxy1G00131 Aquilegia oxysepala HOM05D000393 ORTHO05D000275 5.9e-15 84.3 107 50.5
TAR636G2500 Trochodendron aralioides HOM05D000393 ORTHO05D000275 1.0e-14 83.6 103 54.4
Dinv43933 Davidia involucrata HOM05D000393 ORTHO05D000275 5.5e-13 77.8 112 46.4
GSVIVG01001366001 Vitis vinifera HOM05D000393 ORTHO05D000275 3.0e-11 72.0 76 52.6
Dinv24061 Davidia involucrata HOM05D000393 ORTHO05D000275 6.8e-11 70.9 102 46.1
CiPaw.09G029400 Carya illinoinensis HOM05D000393 ORTHO05D000275 2.6e-10 68.9 105 44.8
ATR0598G310 Amborella trichopoda HOM05D000393 ORTHO05D000275 3.4e-10 68.6 65 60.0
Dinv14317 Davidia involucrata HOM05D000393 ORTHO05D000275 9.8e-10 67.0 109 46.8
TAR623G0315 Trochodendron aralioides HOM05D000393 ORTHO05D000275 1.3e-09 66.6 75 57.3
Thecc.05G173900 Theobroma cacao HOM05D000393 ORTHO05D000275 1.7e-09 66.2 102 45.1
GSVIVG01033481001 Vitis vinifera HOM05D000393 ORTHO05D000275 3.7e-09 65.1 97 47.4
Oeu019112.1 Olea europaea HOM05D000393 ORTHO05D000275 6.3e-09 64.3 103 44.7
Duzib128G0934 Durio zibethinus HOM05D000393 ORTHO05D000275 1.4e-08 63.2 102 44.1
Duzib106G2005 Durio zibethinus HOM05D000393 ORTHO05D000275 1.8e-08 62.8 102 44.1
PSO384G4382 Papaver somniferum HOM05D000393 ORTHO05D000275 1.8e-08 62.8 69 55.1
Sabra09G0014800 Salix brachista HOM05D000393 ORTHO05D000275 3.1e-08 62.0 108 43.5
Cfa020153 Carpinus fangiana HOM05D000393 ORTHO05D000275 7.0e-08 60.8 105 42.9
CDE05G2947 Ceratophyllum demersum HOM05D000393 ORTHO05D000275 9.2e-08 60.5 76 51.3
QL07p024207 Quercus lobata HOM05D000393 ORTHO05D000275 9.2e-08 60.5 106 41.5
COL.COLO4_29338 Corchorus olitorius HOM05D000393 ORTHO05D000275 1.2e-07 60.1 110 42.7
PGSC0003DMG400006311 Solanum tuberosum HOM05D000393 ORTHO05D000275 1.2e-07 60.1 66 56.1
CiPaw.10G025800 Carya illinoinensis HOM05D000393 ORTHO05D000275 2.0e-07 59.3 106 40.6
Haze_20007 Corylus avellana HOM05D000393 ORTHO05D000275 2.0e-07 59.3 103 41.7
Potri.016G059000 Populus trichocarpa HOM05D000393 ORTHO05D000275 2.0e-07 59.3 103 40.8
Potri.006G193700 Populus trichocarpa HOM05D000393 ORTHO05D000275 2.7e-07 58.9 105 43.8
Duzib093G1901 Durio zibethinus HOM05D000393 ORTHO05D000275 3.5e-07 58.5 102 45.1
Sabra16G0061800 Salix brachista HOM05D000393 ORTHO05D000275 3.5e-07 58.5 103 39.8
Potri.009G023600 Populus trichocarpa HOM05D000393 ORTHO05D000275 4.5e-07 58.2 67 56.7
Cpa.g.sc85.56 Carica papaya HOM05D000393 ORTHO05D000275 5.9e-07 57.8 105 41.0
Prupe.7G079300 Prunus persica HOM05D000393 ORTHO05D000275 5.9e-07 57.8 108 43.5
Atru.chr8.1134 Acer truncatum HOM05D000393 ORTHO05D000275 7.7e-07 57.4 66 51.5
HanXRQChr01g0018631 Helianthus annuus HOM05D000393 ORTHO05D000275 7.7e-07 57.4 78 43.6
Manes.08G043900 Manihot esculenta HOM05D000393 ORTHO05D000275 7.7e-07 57.4 61 57.4
Gohir.A04G057100 Gossypium hirsutum HOM05D000393 ORTHO05D000275 1.7e-06 56.2 103 41.7
Gohir.D04G089800 Gossypium hirsutum HOM05D000393 ORTHO05D000275 1.7e-06 56.2 103 41.7
Oeu013585.1 Olea europaea HOM05D000393 ORTHO05D000275 1.7e-06 56.2 98 41.8
CDE11G0637 Ceratophyllum demersum HOM05D000393 ORTHO05D000275 2.3e-06 55.8 76 47.4
Gohir.D09G124700 Gossypium hirsutum HOM05D000393 ORTHO05D000275 5.0e-06 54.7 84 51.2
Gorai.006G143600 Gossypium raimondii HOM05D000393 ORTHO05D000275 5.0e-06 54.7 84 51.2
Gohir.A09G128700 Gossypium hirsutum HOM05D000393 ORTHO05D000275 6.6e-06 54.3 84 47.6


User provided reference genes

Program Settings