Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 5.5e-278 960.3 472 100.0
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 6.1e-253 877.1 468 91.9
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.6e-251 871.7 472 89.2
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 8.0e-245 850.1 468 88.0
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 3.4e-243 844.7 469 87.6
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 5.7e-243 844.0 468 87.6
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 1.7e-242 842.4 468 87.2
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.2e-242 842.0 468 87.2
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 8.3e-242 840.1 468 87.0
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 7.0e-241 837.0 468 86.3
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 1.6e-240 835.9 468 85.7
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 2.0e-240 835.5 468 86.8
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 2.0e-240 835.5 468 86.1
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 3.5e-240 834.7 467 86.3
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 5.9e-240 833.9 468 86.8
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 7.8e-240 833.6 468 86.8
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 1.0e-239 833.2 468 85.7
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 1.3e-239 832.8 468 86.3
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 1.3e-239 832.8 468 85.9
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 1.3e-239 832.8 468 85.3
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 2.3e-239 832.0 468 85.9
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 3.8e-239 831.2 468 86.1
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 8.6e-239 830.1 468 85.7
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 1.1e-238 829.7 468 85.9
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 1.1e-238 829.7 468 86.8
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 1.5e-238 829.3 468 85.9
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.5e-238 829.3 471 85.1
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 1.5e-238 829.3 468 85.7
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 1.9e-238 828.9 468 85.7
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 5.6e-238 827.4 468 86.1
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 9.5e-238 826.6 468 86.1
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 1.6e-237 825.9 468 84.6
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 2.1e-237 825.5 468 85.0
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 2.8e-237 825.1 468 85.7
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 2.8e-237 825.1 468 85.0
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 3.6e-237 824.7 468 85.3
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 1.0e-236 823.2 468 85.9
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.8e-236 822.4 468 85.3
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 3.0e-236 821.6 468 83.3
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 3.0e-236 821.6 468 83.3
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 3.0e-236 821.6 468 83.3
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 5.2e-236 820.8 492 81.7
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 6.8e-236 820.5 469 84.4
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.0e-235 818.9 468 85.0
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 2.6e-235 818.5 459 86.9
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 3.4e-235 818.1 468 84.8
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 3.4e-235 818.1 468 84.0
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 1.3e-234 816.2 468 84.8
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 6.4e-234 813.9 474 84.2
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 6.4e-234 813.9 468 84.6
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 6.4e-234 813.9 468 84.8
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.4e-233 812.0 468 83.8
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 1.6e-232 809.3 468 82.5
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 1.1e-230 803.1 468 81.8
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 1.1e-230 803.1 468 82.9
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 1.5e-230 802.7 468 82.7
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 1.9e-230 802.4 471 83.0
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 5.6e-230 800.8 468 81.4
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 5.6e-230 800.8 469 81.2
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 9.5e-230 800.0 468 82.9
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 9.5e-230 800.0 468 83.3
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 3.6e-229 798.1 468 81.4
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 3.6e-229 798.1 468 81.4
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 3.6e-229 798.1 468 81.8
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 8.0e-229 797.0 468 80.6
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 1.1e-228 796.6 468 82.5
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 1.8e-228 795.8 468 82.5
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 2.3e-228 795.4 471 81.3
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 3.1e-228 795.0 468 82.7
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 3.1e-228 795.0 468 81.6
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 4.0e-228 794.7 468 79.9
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 5.2e-228 794.3 468 81.0
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 5.2e-228 794.3 468 81.0
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 5.2e-228 794.3 468 81.0
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 5.2e-228 794.3 439 88.2
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 5.2e-228 794.3 468 80.6
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 1.2e-227 793.1 468 80.8
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 1.2e-227 793.1 468 81.6
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 1.5e-227 792.7 468 80.6
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 2.6e-227 792.0 463 81.0
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 5.8e-227 790.8 466 82.8
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 9.8e-227 790.0 468 80.1
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 1.7e-226 789.3 474 81.4
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 2.2e-226 788.9 469 80.8
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 2.9e-226 788.5 468 80.1
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 6.4e-226 787.3 571 71.1
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 8.3e-226 786.9 468 82.3
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 1.9e-225 785.8 468 79.9
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 1.9e-225 785.8 468 79.9
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.9e-225 785.8 469 81.4
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 2.4e-225 785.4 467 78.8
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 2.0e-224 782.3 468 78.6
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.7e-223 779.2 481 79.6
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.3e-223 778.9 491 77.8
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 1.9e-222 775.8 468 80.1
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 3.3e-222 775.0 443 86.2
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 1.2e-221 773.1 468 79.7
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 3.2e-217 758.4 470 78.7
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.2e-213 746.5 468 77.8
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 2.1e-213 745.7 463 80.1
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 6.8e-212 740.7 469 75.9
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 8.9e-212 740.3 468 76.3
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 6.0e-208 727.6 467 76.7
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.8e-204 716.1 468 76.5
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 7.3e-198 694.1 386 86.3
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 1.6e-197 693.0 381 87.4
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 3.5e-192 675.2 468 71.8
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 8.7e-191 670.6 468 71.4
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 4.5e-187 658.3 464 70.9
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 3.4e-179 632.1 471 63.9
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 4.6e-176 621.7 397 78.1
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 1.7e-162 576.6 514 56.8
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 6.1e-160 568.2 462 61.9
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 3.0e-143 512.7 385 64.7
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 1.1e-140 504.2 332 75.3
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 7.0e-140 501.5 467 55.0
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 5.6e-89 332.4 184 86.4
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 8.1e-88 328.6 254 63.4
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 2.4e-76 290.4 158 88.0
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 1.5e-49 201.4 453 28.5
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 7.9e-43 179.1 208 48.6
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 3.7e-32 143.7 90 77.8
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 2.5e-28 131.0 461 25.4
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 3.5e-22 110.5 65 78.5
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 3.7e-08 63.9 31 93.5
MCO15G166 Micromonas commoda HOM05D003397 ORTHO05D004390 8.3e-08 62.8 430 22.1


User provided reference genes

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