Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 0.0e+00 1335.1 751 100.0
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 2.7e-117 427.2 695 45.0
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.4e-89 335.1 742 39.8
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.4e-86 325.1 739 38.8
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 5.2e-81 306.6 810 34.1
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 9.9e-80 302.4 699 37.5
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-75 288.9 779 35.3
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 9.0e-73 279.3 824 34.6
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 4.5e-72 276.9 786 35.2
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 4.9e-71 273.5 649 37.3
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 6.4e-71 273.1 706 34.8
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 6.4e-71 273.1 646 36.2
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 6.7e-68 263.1 689 35.1
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 7.4e-67 259.6 831 33.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 1.3e-66 258.8 751 32.2
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.6e-66 258.5 646 35.8
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.3e-60 238.8 748 33.4
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 8.7e-60 236.1 747 35.6
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.4e-59 233.0 693 33.9
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 6.2e-58 229.9 817 31.6
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 4.0e-57 227.3 663 34.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.5e-56 225.3 800 30.8
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 2.6e-56 224.6 802 31.5
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 7.6e-56 223.0 764 31.9
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.8e-55 220.7 703 32.7
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.1e-53 214.9 810 28.5
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 2.7e-53 214.5 749 32.6
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.5e-53 214.2 767 31.3
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 5.7e-51 206.8 733 31.8
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 9.6e-51 206.1 730 32.1
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 8.2e-50 203.0 654 34.7
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 5.3e-49 200.3 826 30.1
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.9e-47 194.5 733 29.1
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 5.0e-47 193.7 796 31.4
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.0e-47 193.7 743 31.6
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.1e-46 192.6 669 31.4
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 5.5e-46 190.3 822 30.4
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 7.2e-46 189.9 735 30.5
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.3e-44 185.7 685 30.9
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 2.3e-44 184.9 576 33.0
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 5.1e-44 183.7 539 35.4
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.9e-43 181.8 396 35.6
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 7.4e-43 179.9 711 31.2
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 1.5e-40 172.2 421 36.8
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.6e-40 171.4 700 30.6
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 2.6e-40 171.4 749 30.8
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 3.4e-40 171.0 806 29.5
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.9e-40 170.2 578 32.4
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 2.5e-38 164.9 684 29.5
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 3.2e-38 164.5 743 29.2
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.6e-37 162.2 648 30.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.7e-34 152.1 651 30.3
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 2.2e-34 151.8 659 29.7
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 3.7e-34 151.0 703 28.4
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 4.8e-34 150.6 749 28.7
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 6.3e-34 150.2 654 30.0
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.4e-33 149.1 672 27.4
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 2.4e-33 148.3 682 27.6
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 3.1e-33 147.9 754 27.7
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.0e-31 142.9 652 29.0
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.3e-31 142.5 685 27.3
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 1.3e-31 142.5 621 25.6
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 1.3e-31 142.5 686 26.5
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 2.2e-31 141.7 695 27.9
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 5.0e-31 140.6 665 29.0
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 8.5e-31 139.8 652 28.1
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 9.4e-30 136.3 662 28.5
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 9.4e-30 136.3 683 26.5
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.6e-29 135.6 661 28.0
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.7e-29 134.8 777 28.2
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 4.7e-29 134.0 709 27.2
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 6.7e-28 130.2 201 58.7
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 2.2e-26 125.2 776 27.7
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 2.8e-26 124.8 653 29.1
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 4.8e-26 124.0 557 28.2
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.4e-25 122.5 664 27.9
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 7.0e-25 120.2 732 26.1
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 9.1e-25 119.8 658 27.2
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.2e-24 119.4 637 28.4
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.2e-24 119.4 306 33.7
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 3.5e-24 117.9 648 27.3
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 1.5e-22 112.5 723 25.6
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 4.2e-22 110.9 634 25.9
Nn2g11993 Nelumbo nucifera HOM05D007378 ORTHO05D007577 8.0e-21 106.7 76 76.3
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.2e-20 104.0 197 44.2
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.2e-19 102.8 553 29.1
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.2e-19 102.8 718 26.0
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.8e-18 98.2 328 34.8
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.4e-17 95.9 312 33.3
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 4.1e-17 94.4 616 26.6
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.0e-16 92.0 663 24.6
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 5.9e-16 90.5 564 27.5
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 7.7e-16 90.1 638 25.2
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 5.0e-15 87.4 580 26.7
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 1.5e-14 85.9 624 24.2
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 4.0e-12 77.8 574 26.3
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 3.4e-11 74.7 576 26.9
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 9.8e-11 73.2 455 27.5
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 2.8e-10 71.6 577 24.6
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 8.3e-10 70.1 577 26.5
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.4e-09 69.3 468 26.3
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 2.4e-09 68.6 462 26.4
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 4.5e-08 64.3 575 24.9
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 1.3e-07 62.8 593 23.9
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 6.5e-07 60.5 584 25.9
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 6.5e-07 60.5 575 25.4
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 6.5e-07 60.5 372 25.3
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 1.1e-06 59.7 372 25.5
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 1.5e-06 59.3 576 25.2
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 2.5e-06 58.5 462 26.0
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 2.5e-06 58.5 369 24.4
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 3.2e-06 58.2 275 29.5


User provided reference genes

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