Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 4.6e-32 140.6 70 100.0
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 2.9e-18 94.7 60 80.0
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.1e-17 92.8 56 82.1
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 1.1e-17 92.8 56 82.1
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 1.1e-17 92.8 58 79.3
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.1e-17 92.8 60 80.0
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.4e-17 92.4 54 87.0
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 1.9e-17 92.0 66 74.2
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 2.5e-17 91.7 57 80.7
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 3.2e-17 91.3 57 77.2
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 4.2e-17 90.9 57 78.9
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 4.2e-17 90.9 60 75.0
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 5.5e-17 90.5 57 78.9
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 7.2e-17 90.1 60 76.7
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 7.2e-17 90.1 58 74.1
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 9.4e-17 89.7 57 75.4
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 9.4e-17 89.7 60 75.0
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 9.4e-17 89.7 54 81.5
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 1.2e-16 89.4 54 81.5
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 1.2e-16 89.4 54 81.5
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 1.2e-16 89.4 54 81.5
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 1.2e-16 89.4 54 81.5
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 1.2e-16 89.4 65 70.8
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.2e-16 89.4 53 84.9
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.2e-16 89.4 53 84.9
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.2e-16 89.4 62 71.0
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 1.6e-16 89.0 54 81.5
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-16 89.0 60 73.3
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.6e-16 89.0 60 73.3
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 1.6e-16 89.0 58 75.9
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.6e-16 89.0 58 72.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.1e-16 88.6 57 77.2
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.1e-16 88.6 57 77.2
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 2.1e-16 88.6 57 77.2
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 2.1e-16 88.6 60 75.0
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 2.7e-16 88.2 60 73.3
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 2.7e-16 88.2 57 77.2
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 2.7e-16 88.2 62 69.4
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 2.7e-16 88.2 56 78.6
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 3.6e-16 87.8 57 73.7
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 3.6e-16 87.8 56 76.8
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.6e-16 87.8 64 68.8
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 3.6e-16 87.8 62 69.4
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 3.6e-16 87.8 56 76.8
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 3.6e-16 87.8 56 76.8
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 4.7e-16 87.4 57 77.2
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 4.7e-16 87.4 60 75.0
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 6.1e-16 87.0 57 75.4
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 6.1e-16 87.0 57 75.4
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 6.1e-16 87.0 58 74.1
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 6.1e-16 87.0 57 75.4
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 8.0e-16 86.7 60 71.7
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 1.0e-15 86.3 54 79.6
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 1.0e-15 86.3 56 78.6
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.0e-15 86.3 56 78.6
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.0e-15 86.3 60 71.7
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.4e-15 85.9 60 73.3
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.4e-15 85.9 58 74.1
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.4e-15 85.9 57 75.4
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 1.4e-15 85.9 58 69.0
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 1.4e-15 85.9 58 72.4
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.8e-15 85.5 60 73.3
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 1.8e-15 85.5 55 78.2
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.8e-15 85.5 55 78.2
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 1.8e-15 85.5 58 72.4
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.8e-15 85.5 62 66.1
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.3e-15 85.1 56 75.0
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.3e-15 85.1 56 75.0
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 3.0e-15 84.7 56 78.6
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 3.0e-15 84.7 57 70.2
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.0e-15 84.7 60 70.0
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 3.0e-15 84.7 53 81.1
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 3.0e-15 84.7 60 73.3
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 3.0e-15 84.7 56 76.8
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 3.9e-15 84.3 60 66.7
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.9e-15 84.3 56 75.0
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 5.2e-15 84.0 54 79.6
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 6.7e-15 83.6 58 67.2
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 6.7e-15 83.6 53 79.2
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 6.7e-15 83.6 56 76.8
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 6.7e-15 83.6 57 70.2
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 8.8e-15 83.2 62 66.1
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 8.8e-15 83.2 53 79.2
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 1.1e-14 82.8 54 75.9
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 1.1e-14 82.8 56 75.0
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 1.1e-14 82.8 56 75.0
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 1.1e-14 82.8 57 73.7
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 1.1e-14 82.8 57 73.7
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 2.0e-14 82.0 57 71.9
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 2.0e-14 82.0 53 75.5
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 3.3e-14 81.3 53 75.5
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 5.7e-14 80.5 56 69.6
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 5.7e-14 80.5 53 77.4
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 5.7e-14 80.5 54 77.8
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 5.7e-14 80.5 53 71.7
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 7.4e-14 80.1 59 66.1
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 7.4e-14 80.1 57 70.2
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 7.4e-14 80.1 57 71.9
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 9.7e-14 79.7 56 71.4
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.7e-13 79.0 57 68.4
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 2.2e-13 78.6 54 74.1
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 8.2e-13 76.6 52 69.2
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 8.2e-13 76.6 60 60.0
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.4e-12 75.1 56 67.9
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.4e-12 75.1 56 67.9
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.4e-12 75.1 56 67.9
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 7.0e-12 73.6 52 65.4
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.2e-11 72.8 54 70.4
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 4.5e-11 70.9 41 85.4
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 5.9e-11 70.5 43 79.1
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 7.7e-11 70.1 63 55.6
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 1.7e-10 68.9 53 69.8
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.7e-10 68.9 60 51.7
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 8.5e-10 66.6 58 53.4
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 8.5e-10 66.6 68 50.0
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-09 65.5 52 57.7
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.2e-09 64.7 52 57.7
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 4.2e-09 64.3 52 55.8
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 4.2e-09 64.3 52 55.8
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-09 63.9 52 51.9
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-08 62.8 52 53.8
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-08 62.8 52 51.9
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-08 62.8 52 51.9
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-08 61.6 52 51.9
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-08 61.6 52 51.9
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 6.1e-08 60.5 52 51.9
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 6.1e-08 60.5 52 51.9
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 8.0e-08 60.1 52 53.8
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 8.0e-08 60.1 52 53.8
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.0e-07 59.7 52 57.7
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-07 59.3 52 50.0
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.8e-07 58.9 63 42.9
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 6.7e-07 57.0 53 52.8
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 8.8e-07 56.6 52 51.9
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 8.8e-07 56.6 52 48.1
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-06 56.2 52 50.0
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 7.5e-06 53.5 52 51.9


User provided reference genes

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