Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g29630 Nelumbo nucifera HOM05D016668 ORTHO05D002058 1.1e-47 193.0 99 100.0
Nn1g02519 Nelumbo nucifera HOM05D016668 ORTHO05D277509 8.6e-24 113.6 66 89.4
TAR626G0534 Trochodendron aralioides HOM05D002095 ORTHO05D002058 1.2e-22 109.8 137 51.8
Nn1g07412 Nelumbo nucifera HOM05D002095 ORTHO05D002058 4.4e-20 101.3 141 48.2
Nn1g02985 Nelumbo nucifera HOM05D016668 ORTHO05D272146 4.6e-17 91.3 51 86.3
Dinv07410 Davidia involucrata HOM05D002095 ORTHO05D002058 1.3e-16 89.7 138 44.9
CSS0014644 Camellia sinensis var. sinensis HOM05D002095 ORTHO05D002058 8.1e-14 80.5 139 41.0
CSS0017522 Camellia sinensis var. sinensis HOM05D002095 ORTHO05D002058 8.1e-14 80.5 139 41.0
Rhsim13G0145500 Rhododendron simsii HOM05D002095 ORTHO05D002058 2.3e-13 79.0 120 43.3
RhsimUnG0110400 Rhododendron simsii HOM05D002095 ORTHO05D002058 2.3e-13 79.0 120 43.3
PSO541G2599 Papaver somniferum HOM05D002095 ORTHO05D002058 4.0e-13 78.2 125 43.2
PSO675G0057 Papaver somniferum HOM05D002095 ORTHO05D002058 4.0e-13 78.2 125 43.2
Hma1.2p1_0657F.1_g197090 Hydrangea macrophylla HOM05D002095 ORTHO05D002058 2.0e-12 75.9 142 36.6
Manes.08G068300 Manihot esculenta HOM05D002095 ORTHO05D002058 3.7e-11 71.6 138 37.0
Nn3g21700 Nelumbo nucifera HOM05D016668 ORTHO05D010369 4.9e-11 71.2 36 86.1
Lj1A1240G33 Lonicera japonica HOM05D002095 ORTHO05D002058 6.4e-11 70.9 138 39.9
Manes.09G077200 Manihot esculenta HOM05D002095 ORTHO05D002058 8.3e-11 70.5 139 36.0
Nn1g04952 Nelumbo nucifera HOM05D016668 ORTHO05D010369 8.3e-11 70.5 36 86.1
MBI16_g31703_MAGBIO Magnolia biondii HOM05D002095 ORTHO05D002058 4.1e-10 68.2 115 40.0
Lalb_Chr18g0056991 Lupinus albus HOM05D002095 ORTHO05D002058 1.2e-09 66.6 132 35.6
Thecc.06G234100 Theobroma cacao HOM05D002095 ORTHO05D002058 3.5e-09 65.1 134 35.8
Potri.006G011701 Populus trichocarpa HOM05D002095 ORTHO05D002058 4.6e-09 64.7 137 32.8
Prupe.4G009700 Prunus persica HOM05D002095 ORTHO05D002058 4.6e-09 64.7 142 34.5
Aqoxy7G03068 Aquilegia oxysepala HOM05D002095 ORTHO05D002058 6.0e-09 64.3 92 45.7
Cpa.g.sc3792.1 Carica papaya HOM05D002095 ORTHO05D002058 7.8e-09 63.9 141 34.0
Nn1g05422 Nelumbo nucifera HOM05D016668 ORTHO05D271724 7.8e-09 63.9 36 75.0
Duzib160G0921 Durio zibethinus HOM05D002095 ORTHO05D002058 1.0e-08 63.5 134 38.8
QL05p069565 Quercus lobata HOM05D002095 ORTHO05D002058 1.0e-08 63.5 144 34.0
Sabra06G0009300 Salix brachista HOM05D002095 ORTHO05D002058 1.3e-08 63.2 139 34.5
Glyma.17G008400 Glycine max HOM05D002095 ORTHO05D002058 1.7e-08 62.8 105 41.0
CiPaw.09G103000 Carya illinoinensis HOM05D002095 ORTHO05D002058 5.1e-08 61.2 135 34.8
MD10G1332500 Malus domestica HOM05D002095 ORTHO05D002058 5.1e-08 61.2 141 32.6
CANSAT56G0973 Cannabis sativa HOM05D002095 ORTHO05D002058 6.6e-08 60.8 146 32.2
Rhsim02G0101000 Rhododendron simsii HOM05D002095 ORTHO05D002058 6.6e-08 60.8 149 33.6
arahy.Tifrunner.gnm1.ann1.YREA25 Arachis hypogaea HOM05D002095 ORTHO05D002058 8.6e-08 60.5 116 38.8
Rhsim02G0099700 Rhododendron simsii HOM05D002095 ORTHO05D002058 8.6e-08 60.5 150 33.3
Glyma.07G265600 Glycine max HOM05D002095 ORTHO05D002058 1.1e-07 60.1 113 37.2
Potri.016G012900 Populus trichocarpa HOM05D002095 ORTHO05D002058 1.1e-07 60.1 130 35.4
arahy.Tifrunner.gnm1.ann1.WNC7YQ Arachis hypogaea HOM05D002095 ORTHO05D002058 1.5e-07 59.7 116 37.9
Sabra16G0015600 Salix brachista HOM05D002095 ORTHO05D002058 1.5e-07 59.7 128 35.2
Atru.chr1.2434 Acer truncatum HOM05D002095 ORTHO05D002058 1.9e-07 59.3 134 34.3
Gohir.A06G153300 Gossypium hirsutum HOM05D002095 ORTHO05D002058 2.5e-07 58.9 126 34.9
Gorai.010G186800 Gossypium raimondii HOM05D002095 ORTHO05D002058 2.5e-07 58.9 129 35.7
Sabra16G0002500 Salix brachista HOM05D002095 ORTHO05D002058 2.5e-07 58.9 128 35.2
Sed0012971 Sechium edule HOM05D002095 ORTHO05D002058 2.5e-07 58.9 131 36.6
FAN21G3943 Fragaria x ananassa HOM05D002095 ORTHO05D002058 3.3e-07 58.5 135 35.6
Aqoxy1G04052 Aquilegia oxysepala HOM05D002095 ORTHO05D002058 4.3e-07 58.2 93 41.9
CiPaw.10G078500 Carya illinoinensis HOM05D002095 ORTHO05D002058 4.3e-07 58.2 139 32.4
Eucgr.D01414 Eucalyptus grandis HOM05D002095 ORTHO05D002058 4.3e-07 58.2 120 35.8
Gohir.D06G160100 Gossypium hirsutum HOM05D002095 ORTHO05D002058 5.6e-07 57.8 126 34.1
CSS0046522 Camellia sinensis var. sinensis HOM05D002095 ORTHO05D002058 7.3e-07 57.4 122 37.7
Nn2g15659 Nelumbo nucifera HOM05D016668 ORTHO05D277698 7.3e-07 57.4 63 55.6
PGR004G2232 Punica granatum HOM05D002095 ORTHO05D002058 7.3e-07 57.4 123 35.8
ClCG01G021450 Citrullus lanatus HOM05D002095 ORTHO05D002058 9.5e-07 57.0 136 34.6
MELO3C007439.2 Cucumis melo HOM05D002095 ORTHO05D002058 9.5e-07 57.0 136 36.8
FAN25G0912 Fragaria x ananassa HOM05D002095 ORTHO05D002058 9.5e-07 57.0 138 36.2
COL.COLO4_31893 Corchorus olitorius HOM05D002095 ORTHO05D002058 1.6e-06 56.2 144 34.0
FvH4_3g00910 Fragaria vesca HOM05D002095 ORTHO05D002058 1.6e-06 56.2 139 34.5
MSTRG.7165 Avicennia marina HOM05D002095 ORTHO05D002058 2.1e-06 55.8 100 39.0
Cfa000093 Carpinus fangiana HOM05D002095 ORTHO05D002058 2.1e-06 55.8 131 32.1
CsaV3_6G048470 Cucumis sativus L. HOM05D002095 ORTHO05D002058 2.8e-06 55.5 136 36.0
Duzib192G0198 Durio zibethinus HOM05D002095 ORTHO05D002058 2.8e-06 55.5 138 33.3
unitig_32.g11053 Utricularia gibba HOM05D002095 ORTHO05D002058 3.6e-06 55.1 96 41.7
Gohir.D05G177800 Gossypium hirsutum HOM05D002095 ORTHO05D002058 4.7e-06 54.7 123 35.0
Duzib235G1530 Durio zibethinus HOM05D002095 ORTHO05D002058 6.2e-06 54.3 130 36.9
Gorai.009G183200 Gossypium raimondii HOM05D002095 ORTHO05D002058 6.2e-06 54.3 123 35.0
GSVIVG01003328001 Vitis vinifera HOM05D002095 ORTHO05D002058 6.2e-06 54.3 33 69.7
Ciclev10014213m.g Citrus clementina HOM05D002095 ORTHO05D002058 8.1e-06 53.9 119 31.9


User provided reference genes

Program Settings