Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g29591 Nelumbo nucifera HOM05D000293 ORTHO05D000180 2.1e-67 258.8 125 100.0
Nn3g17881 Nelumbo nucifera HOM05D000293 ORTHO05D000180 1.2e-43 179.9 95 90.5
Nn4g23888 Nelumbo nucifera HOM05D000293 ORTHO05D000180 1.4e-26 123.2 100 66.0
TAR629G3466 Trochodendron aralioides HOM05D000293 ORTHO05D000180 3.3e-20 102.1 99 53.5
TAR622G0742 Trochodendron aralioides HOM05D000293 ORTHO05D000180 6.8e-18 94.4 99 49.5
Gohir.A09G048400 Gossypium hirsutum HOM05D000293 ORTHO05D000180 3.5e-14 82.0 87 40.2
GSVIVG01008303001 Vitis vinifera HOM05D000293 ORTHO05D000180 7.8e-14 80.9 96 43.8
Gorai.006G060300 Gossypium raimondii HOM05D000293 ORTHO05D000180 1.0e-13 80.5 87 39.1
Dinv15688 Davidia involucrata HOM05D000293 ORTHO05D000180 2.3e-13 79.3 94 40.4
TAR371G0682 Trochodendron aralioides HOM05D000293 ORTHO05D000180 5.1e-13 78.2 88 44.3
Potri.012G055600 Populus trichocarpa HOM05D000293 ORTHO05D000180 6.6e-13 77.8 100 39.0
Duzib205G0573 Durio zibethinus HOM05D000293 ORTHO05D000180 1.1e-12 77.0 120 35.0
CSS0024477 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 5.6e-12 74.7 96 39.6
Dinv28115 Davidia involucrata HOM05D000293 ORTHO05D000180 7.3e-12 74.3 97 39.2
Dinv31623 Davidia involucrata HOM05D000293 ORTHO05D000180 1.2e-11 73.6 87 43.7
Duzib068G0265 Durio zibethinus HOM05D000293 ORTHO05D000180 1.2e-11 73.6 105 34.3
Hma1.2p1_0061F.1_g033690 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 1.2e-11 73.6 92 42.4
MBI16_g34415_MAGBIO Magnolia biondii HOM05D000293 ORTHO05D000180 2.8e-11 72.4 110 39.1
Sabra15G0039500 Salix brachista HOM05D000293 ORTHO05D000180 2.8e-11 72.4 100 38.0
Lj4g0004533 Lotus japonicus HOM05D000293 ORTHO05D000180 4.7e-11 71.6 94 41.5
CSS0015964 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 6.2e-11 71.2 105 43.8
Potri.015G046200 Populus trichocarpa HOM05D000293 ORTHO05D000180 8.1e-11 70.9 98 34.7
QL10p025584 Quercus lobata HOM05D000293 ORTHO05D000180 8.1e-11 70.9 98 34.7
Aqoxy3G00266 Aquilegia oxysepala HOM05D000293 ORTHO05D000180 1.1e-10 70.5 93 43.0
Sabra12G0039200 Salix brachista HOM05D000293 ORTHO05D000180 1.4e-10 70.1 97 35.1
Haze_18692 Corylus avellana HOM05D000293 ORTHO05D000180 6.8e-10 67.8 99 35.4
Dinv21064 Davidia involucrata HOM05D000293 ORTHO05D000180 1.2e-09 67.0 83 41.0
QL01p040886 Quercus lobata HOM05D000293 ORTHO05D000180 2.0e-09 66.2 87 39.1
vmacro10570 Vaccinium macrocarpon HOM05D000293 ORTHO05D000180 2.6e-09 65.9 97 37.1
Cfa019756 Carpinus fangiana HOM05D000293 ORTHO05D000180 3.4e-09 65.5 92 39.1
Gohir.D09G049500 Gossypium hirsutum HOM05D000293 ORTHO05D000180 3.4e-09 65.5 75 38.7
Rhsim02G0033700 Rhododendron simsii HOM05D000293 ORTHO05D000180 4.4e-09 65.1 90 38.9
Lalb_Chr05g0222451 Lupinus albus HOM05D000293 ORTHO05D000180 5.8e-09 64.7 92 39.1
Eucgr.B03006 Eucalyptus grandis HOM05D000293 ORTHO05D000180 7.5e-09 64.3 105 32.4
Hma1.2p1_0653F.1_g196210 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 7.5e-09 64.3 101 39.6
CiPaw.05G239300 Carya illinoinensis HOM05D000293 ORTHO05D000180 9.9e-09 63.9 87 37.9
CiPaw.16G087300 Carya illinoinensis HOM05D000293 ORTHO05D000180 9.9e-09 63.9 90 36.7
Duzib251G0562 Durio zibethinus HOM05D000293 ORTHO05D000180 1.3e-08 63.5 99 34.3
Glyma.05G234600 Glycine max HOM05D000293 ORTHO05D000180 3.7e-08 62.0 97 37.1
Thecc.02G226200 Theobroma cacao HOM05D000293 ORTHO05D000180 4.9e-08 61.6 67 35.8
Potri.010G123000 Populus trichocarpa HOM05D000293 ORTHO05D000180 8.3e-08 60.8 100 37.0
Lj3A1013T44 Lonicera japonica HOM05D000293 ORTHO05D000180 1.9e-07 59.7 102 37.3
Manes.14G104200 Manihot esculenta HOM05D000293 ORTHO05D000180 1.9e-07 59.7 71 42.3
COL.COLO4_04897 Corchorus olitorius HOM05D000293 ORTHO05D000180 3.2e-07 58.9 101 33.7
Duzib248G0768 Durio zibethinus HOM05D000293 ORTHO05D000180 3.2e-07 58.9 97 33.0
Lj5g0016068 Lotus japonicus HOM05D000293 ORTHO05D000180 4.1e-07 58.5 91 37.4
vmacro17710 Vaccinium macrocarpon HOM05D000293 ORTHO05D000180 4.1e-07 58.5 127 30.7
Glyma.08G042100 Glycine max HOM05D000293 ORTHO05D000180 5.4e-07 58.2 95 36.8
Actinidia14905 Actinidia chinensis HOM05D000293 ORTHO05D000180 7.1e-07 57.8 91 35.2
Medtr1g110460 Medicago truncatula HOM05D000293 ORTHO05D000180 2.1e-06 56.2 90 31.1
VMungo0251G0954 Vigna mungo HOM05D000293 ORTHO05D000180 2.7e-06 55.8 96 33.3
Thecc.03G036800 Theobroma cacao HOM05D000293 ORTHO05D000180 4.6e-06 55.1 92 29.3
Cfa015868 Carpinus fangiana HOM05D000293 ORTHO05D000180 6.0e-06 54.7 89 34.8
Potri.008G122100 Populus trichocarpa HOM05D000293 ORTHO05D000180 6.0e-06 54.7 100 37.0
Actinidia16664 Actinidia chinensis HOM05D000293 ORTHO05D000180 7.8e-06 54.3 99 33.3
Phvul.002G317000 Phaseolus vulgaris HOM05D000293 ORTHO05D000180 7.8e-06 54.3 99 31.3


User provided reference genes

Program Settings