Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g29444 Nelumbo nucifera HOM05D007602 ORTHO05D009086 7.1e-26 119.8 59 100.0
Nn6g32178 Nelumbo nucifera HOM05D007602 ORTHO05D009086 5.3e-13 77.0 59 64.4
Nn5g29445 Nelumbo nucifera HOM05D007602 ORTHO05D009086 1.2e-12 75.9 59 66.1
TAR381G0702 Trochodendron aralioides HOM05D007602 ORTHO05D009086 1.3e-11 72.4 59 61.0
Thecc.08G131300 Theobroma cacao HOM05D007602 ORTHO05D009086 6.7e-08 60.1 59 52.5
ClCG09G017780 Citrullus lanatus HOM05D007602 ORTHO05D009086 1.1e-07 59.3 59 52.5
MELO3C021943.2 Cucumis melo HOM05D007602 ORTHO05D009086 1.1e-07 59.3 59 52.5
CsaV3_2G014370 Cucumis sativus L. HOM05D007602 ORTHO05D009086 1.1e-07 59.3 59 52.5
Duzib132G1115 Durio zibethinus HOM05D007602 ORTHO05D009086 1.1e-07 59.3 59 52.5
PGR042G2915 Punica granatum HOM05D007602 ORTHO05D009086 1.1e-07 59.3 59 52.5
Gohir.A04G129300 Gossypium hirsutum HOM05D007602 ORTHO05D009086 3.3e-07 57.8 59 49.2
Gohir.D04G174400 Gossypium hirsutum HOM05D007602 ORTHO05D009086 3.3e-07 57.8 59 49.2
Gorai.012G163900 Gossypium raimondii HOM05D007602 ORTHO05D009086 3.3e-07 57.8 59 49.2
Duzib248G0323 Durio zibethinus HOM05D007602 ORTHO05D009086 4.4e-07 57.4 59 50.8
Duzib248G0595 Durio zibethinus HOM05D007602 ORTHO05D009086 4.4e-07 57.4 59 50.8
Duzib248G1495 Durio zibethinus HOM05D007602 ORTHO05D009086 4.4e-07 57.4 59 50.8
Gorai.004G104500 Gossypium raimondii HOM05D007602 ORTHO05D009086 4.4e-07 57.4 59 49.2
Hma1.2p1_0584F.1_g183350 Hydrangea macrophylla HOM05D007602 ORTHO05D009086 4.4e-07 57.4 57 52.6
Gohir.A04G129200 Gossypium hirsutum HOM05D007602 ORTHO05D009086 5.7e-07 57.0 59 49.2
Gorai.012G163800 Gossypium raimondii HOM05D007602 ORTHO05D009086 5.7e-07 57.0 59 49.2
Manes.17G097600 Manihot esculenta HOM05D007602 ORTHO05D009086 5.7e-07 57.0 59 49.2
Glyma.12G047200 Glycine max HOM05D007602 ORTHO05D009086 7.4e-07 56.6 59 50.8
Sed0020423 Sechium edule HOM05D007602 ORTHO05D009086 7.4e-07 56.6 59 49.2
Thecc.02G030000 Theobroma cacao HOM05D007602 ORTHO05D009086 9.7e-07 56.2 59 50.8
Oeu007232.1 Olea europaea HOM05D007602 ORTHO05D009086 1.3e-06 55.8 59 50.8
CiPaw.05G059500 Carya illinoinensis HOM05D007602 ORTHO05D009086 1.7e-06 55.5 59 50.8
Sabra04G0099200 Salix brachista HOM05D007602 ORTHO05D009086 1.7e-06 55.5 58 51.7
Manes.15G146500 Manihot esculenta HOM05D007602 ORTHO05D009086 2.2e-06 55.1 59 47.5
Phvul.011G049200 Phaseolus vulgaris HOM05D007602 ORTHO05D009086 2.8e-06 54.7 59 50.8
Cpa.g.sc62.91 Carica papaya HOM05D007602 ORTHO05D009086 3.7e-06 54.3 59 49.2
Gohir.D04G174300 Gossypium hirsutum HOM05D007602 ORTHO05D009086 3.7e-06 54.3 59 47.5
Migut.B00282 Erythranthe guttata HOM05D007602 ORTHO05D009086 6.3e-06 53.5 59 49.2
Lj3g0015904 Lotus japonicus HOM05D007602 ORTHO05D009086 6.3e-06 53.5 59 49.2
Potri.004G149200 Populus trichocarpa HOM05D007602 ORTHO05D009086 6.3e-06 53.5 59 49.2
Prupe.8G107900 Prunus persica HOM05D007602 ORTHO05D009086 6.3e-06 53.5 59 47.5


User provided reference genes

Program Settings