Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g29359 Nelumbo nucifera HOM05D001998 ORTHO05D002026 4.6e-52 208.0 137 100.0
Nn3g19631 Nelumbo nucifera HOM05D001998 ORTHO05D002026 4.7e-36 154.8 137 82.5
TAR369G0710 Trochodendron aralioides HOM05D001998 ORTHO05D002026 8.3e-17 90.9 82 59.8
Nn6g32230 Nelumbo nucifera HOM05D001998 ORTHO05D002026 1.8e-16 89.7 91 62.6
Nn2g10733 Nelumbo nucifera HOM05D001998 ORTHO05D002026 2.7e-15 85.9 82 61.0
Ciclev10030438m.g Citrus clementina HOM05D001998 ORTHO05D002026 1.8e-11 73.2 82 54.9
Duzib170G0315 Durio zibethinus HOM05D001998 ORTHO05D002026 5.2e-11 71.6 85 58.8
CDE02G0123 Ceratophyllum demersum HOM05D001998 ORTHO05D002026 6.8e-11 71.2 82 54.9
Haze_23890 Corylus avellana HOM05D001998 ORTHO05D002026 8.8e-11 70.9 84 54.8
CiPaw.05G044200 Carya illinoinensis HOM05D001998 ORTHO05D002026 1.5e-10 70.1 87 56.3
Duzib150G1171 Durio zibethinus HOM05D001998 ORTHO05D002026 1.7e-09 66.6 84 57.1
Manes.04G023900 Manihot esculenta HOM05D001998 ORTHO05D002026 2.2e-09 66.2 84 51.2
HanXRQChr02g0055921 Helianthus annuus HOM05D001998 ORTHO05D002026 2.8e-09 65.9 82 51.2
Manes.11G142600 Manihot esculenta HOM05D001998 ORTHO05D002026 2.8e-09 65.9 84 52.4
Aqoxy4G03243 Aquilegia oxysepala HOM05D001998 ORTHO05D002026 8.3e-09 64.3 89 50.6
Nn2g13045 Nelumbo nucifera HOM05D001998 ORTHO05D002026 8.3e-09 64.3 82 52.4
ATR0759G050 Amborella trichopoda HOM05D001998 ORTHO05D002026 1.8e-08 63.2 83 55.4
CSS0017421 Camellia sinensis var. sinensis HOM05D001998 ORTHO05D002026 2.4e-08 62.8 86 51.2
RcHm_v2.0_Chr5g0081371 Rosa chinensis HOM05D001998 ORTHO05D002026 5.4e-08 61.6 86 45.3
Sed0001399 Sechium edule HOM05D001998 ORTHO05D002026 1.2e-07 60.5 86 53.5
Nn2g15595 Nelumbo nucifera HOM05D000288 ORTHO05D000173 1.6e-07 60.1 31 87.1
TAR623G1390 Trochodendron aralioides HOM05D001998 ORTHO05D002026 2.7e-07 59.3 82 47.6
GSVIVG01025162001 Vitis vinifera HOM05D000190 ORTHO05D000113 2.7e-07 59.3 82 45.1
PGR119G2055 Punica granatum HOM05D001998 ORTHO05D002026 4.5e-07 58.5 82 46.3
RcHm_v2.0_Chr6g0270251 Rosa chinensis HOM05D001998 ORTHO05D002026 7.7e-07 57.8 89 47.2
TWI31G0162 Tripterygium wilfordii HOM05D001998 ORTHO05D002026 1.3e-06 57.0 85 47.1
Cfa011350 Carpinus fangiana HOM05D001998 ORTHO05D002026 1.7e-06 56.6 84 47.6
CSS0032624 Camellia sinensis var. sinensis HOM05D001998 ORTHO05D002026 2.3e-06 56.2 85 45.9
RcHm_v2.0_Chr1g0375461 Rosa chinensis HOM05D001998 ORTHO05D002026 5.0e-06 55.1 86 43.0
MBI15_g00076_MAGBIO Magnolia biondii HOM05D001998 ORTHO05D002026 6.6e-06 54.7 82 45.1
Oeu001258.1 Olea europaea HOM05D001998 ORTHO05D002026 6.6e-06 54.7 83 48.2
Lsat_1_v5_gn_6_46540 Lactuca sativa HOM05D001998 ORTHO05D002026 8.6e-06 54.3 84 45.2


User provided reference genes

Program Settings