Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g29287 Nelumbo nucifera HOM05D000846 ORTHO05D024716 6.4e-15 82.8 39 100.0
Nn1g08833 Nelumbo nucifera HOM05D000846 ORTHO05D006755 3.1e-09 63.9 34 85.3
QL02p099167 Quercus lobata HOM05D000846 ORTHO05D006755 7.6e-08 59.3 34 79.4
Cfa005511 Carpinus fangiana HOM05D000846 ORTHO05D006755 1.3e-07 58.5 34 79.4
Haze_01712 Corylus avellana HOM05D000846 ORTHO05D006755 1.3e-07 58.5 34 79.4
MBI01_g09375_MAGBIO Magnolia biondii HOM05D000846 ORTHO05D006755 1.3e-07 58.5 34 82.4
QL03p043600 Quercus lobata HOM05D000846 ORTHO05D024716 1.7e-07 58.2 34 76.5
TAR381G0552 Trochodendron aralioides HOM05D000846 ORTHO05D006755 2.2e-07 57.8 35 74.3
Nn5g28327 Nelumbo nucifera HOM05D000846 ORTHO05D006755 3.8e-07 57.0 34 79.4
MD15G1425400 Malus domestica HOM05D000846 ORTHO05D006755 4.9e-07 56.6 35 71.4
GSVIVG01022879001 Vitis vinifera HOM05D000846 ORTHO05D006755 4.9e-07 56.6 34 73.5
DCAR_001823 Daucus carota HOM05D000846 ORTHO05D006755 6.4e-07 56.2 34 76.5
Atru.chr11.1221 Acer truncatum HOM05D000846 ORTHO05D006755 8.4e-07 55.8 34 73.5
Duzib251G0663 Durio zibethinus HOM05D000846 ORTHO05D006755 8.4e-07 55.8 34 73.5
RcHm_v2.0_Chr7g0221821 Rosa chinensis HOM05D000846 ORTHO05D006755 8.4e-07 55.8 34 73.5
Actinidia39034 Actinidia chinensis HOM05D000846 ORTHO05D006755 1.1e-06 55.5 34 76.5
Gohir.A05G308500 Gossypium hirsutum HOM05D000846 ORTHO05D006755 1.1e-06 55.5 34 73.5
MD08G1234100 Malus domestica HOM05D000846 ORTHO05D006755 1.1e-06 55.5 34 73.5
Thecc.02G295900 Theobroma cacao HOM05D000846 ORTHO05D006755 1.1e-06 55.5 34 73.5
COL.COLO4_00108 Corchorus olitorius HOM05D000846 ORTHO05D024716 1.4e-06 55.1 34 73.5
HanXRQChr03g0073611 Helianthus annuus HOM05D000846 ORTHO05D006755 1.4e-06 55.1 34 70.6
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.9e-06 54.7 34 73.5
AL7G25080 Arabidopsis lyrata HOM05D000846 ORTHO05D006755 1.9e-06 54.7 34 70.6
MSTRG.16514 Avicennia marina HOM05D000846 ORTHO05D006755 1.9e-06 54.7 33 72.7
CiPaw.06G146600 Carya illinoinensis HOM05D000846 ORTHO05D006755 1.9e-06 54.7 34 70.6
C07p55610 Brassica napus HOM05D000846 ORTHO05D006755 2.4e-06 54.3 34 70.6
BolC7t46041H Brassica oleracea HOM05D000846 ORTHO05D006755 2.4e-06 54.3 34 70.6
CSS0000492 Camellia sinensis var. sinensis HOM05D000846 ORTHO05D006755 2.4e-06 54.3 35 71.4
Gohir.D05G309200 Gossypium hirsutum HOM05D000846 ORTHO05D006755 2.4e-06 54.3 34 70.6
Gorai.009G329500 Gossypium raimondii HOM05D000846 ORTHO05D006755 2.4e-06 54.3 34 70.6
Aa31LG9G17870 Aethionema arabicum HOM05D000846 ORTHO05D006755 3.2e-06 53.9 34 67.6
BcaC06g32677 Brassica carinata HOM05D000846 ORTHO05D006755 3.2e-06 53.9 34 67.6
Thhalv10024293m.g Eutrema salsugineum HOM05D000846 ORTHO05D006755 3.2e-06 53.9 34 70.6
Prupe.1G571100 Prunus persica HOM05D000846 ORTHO05D006755 3.2e-06 53.9 34 70.6
Ah.03g132090 Amaranthus hybridus HOM05D000846 ORTHO05D006755 4.2e-06 53.5 34 73.5
Cc02_g22620 Coffea canephora HOM05D000846 ORTHO05D006755 4.2e-06 53.5 34 67.6
MELO3C019464.2 Cucumis melo HOM05D000846 ORTHO05D006755 4.2e-06 53.5 34 70.6
CsaV3_3G019110 Cucumis sativus L. HOM05D000846 ORTHO05D006755 4.2e-06 53.5 34 70.6
FvH4_5g29150 Fragaria vesca HOM05D000846 ORTHO05D006755 4.2e-06 53.5 34 67.6
FAN04G0084 Fragaria x ananassa HOM05D000846 ORTHO05D006755 4.2e-06 53.5 34 67.6
FAN08G3691 Fragaria x ananassa HOM05D000846 ORTHO05D006755 4.2e-06 53.5 34 67.6
FAN13G1889 Fragaria x ananassa HOM05D000846 ORTHO05D006755 4.2e-06 53.5 34 67.6
Carub.0007s1321 Capsella rubella HOM05D000846 ORTHO05D006755 5.4e-06 53.1 34 67.6
Dinv19375 Davidia involucrata HOM05D000846 ORTHO05D006755 5.4e-06 53.1 34 70.6
FAN18G2713 Fragaria x ananassa HOM05D000846 ORTHO05D006755 5.4e-06 53.1 34 67.6
ECA240G4115 Erigeron canadensis HOM05D000846 ORTHO05D006755 7.1e-06 52.8 34 67.6
Rhsim05G0119700 Rhododendron simsii HOM05D000846 ORTHO05D006755 7.1e-06 52.8 34 70.6


User provided reference genes

Program Settings