Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g29212 Nelumbo nucifera HOM05D004463 ORTHO05D004724 1.1e-70 270.4 199 100.0
Lj9P382T32 Lonicera japonica HOM05D004463 ORTHO05D004724 1.4e-25 120.6 170 74.7
Gorai.005G248300 Gossypium raimondii HOM05D004463 ORTHO05D004724 6.1e-21 105.1 213 61.0
Duzib248G1389 Durio zibethinus HOM05D004463 ORTHO05D004724 1.4e-20 104.0 137 84.7
Haze_03437 Corylus avellana HOM05D004463 ORTHO05D004724 2.2e-18 96.7 141 83.0
ClCG02G004610 Citrullus lanatus HOM05D004463 ORTHO05D004724 3.7e-18 95.9 144 83.3
Potri.004G161800 Populus trichocarpa HOM05D004463 ORTHO05D004724 4.9e-18 95.5 133 82.0
Glyma.04G008700 Glycine max HOM05D004463 ORTHO05D004724 8.3e-18 94.7 140 81.4
MELO3C013423.2 Cucumis melo HOM05D004463 ORTHO05D004724 1.4e-17 94.0 144 81.9
Sed0022229 Sechium edule HOM05D004463 ORTHO05D004724 1.4e-17 94.0 138 85.5
Glyma.06G008500 Glycine max HOM05D004463 ORTHO05D004724 1.8e-17 93.6 143 80.4
arahy.Tifrunner.gnm1.ann1.0JY1T4 Arachis hypogaea HOM05D004463 ORTHO05D004724 2.4e-17 93.2 137 86.1
arahy.Tifrunner.gnm1.ann1.2L6AT5 Arachis hypogaea HOM05D004463 ORTHO05D004724 2.4e-17 93.2 137 86.1
CsaV3_7G000350 Cucumis sativus L. HOM05D004463 ORTHO05D004724 2.4e-17 93.2 144 81.2
QL11p046341 Quercus lobata HOM05D004463 ORTHO05D004724 3.2e-17 92.8 139 80.6
COL.COLO4_26036 Corchorus olitorius HOM05D004463 ORTHO05D004724 1.2e-16 90.9 137 82.5
MD10G1063900 Malus domestica HOM05D004463 ORTHO05D004724 2.7e-16 89.7 143 79.7
MD00G1040200 Malus domestica HOM05D004463 ORTHO05D004724 3.5e-16 89.4 145 77.9
Phvul.009G003600 Phaseolus vulgaris HOM05D004463 ORTHO05D004724 3.5e-16 89.4 145 77.9
PGR042G1049 Punica granatum HOM05D004463 ORTHO05D004724 3.5e-16 89.4 140 82.1
Lj1g0018700 Lotus japonicus HOM05D004463 ORTHO05D004724 1.0e-15 87.8 147 79.6
Lj7P673T50 Lonicera japonica HOM05D004463 ORTHO05D004724 1.3e-15 87.4 130 66.9
VMungo1309G0843 Vigna mungo HOM05D000018 ORTHO05D001040 1.3e-15 87.4 141 77.3
Atru.chr5.3137 Acer truncatum HOM05D004463 ORTHO05D004724 1.7e-15 87.0 138 83.3
Gohir.A03G199000 Gossypium hirsutum HOM05D004463 ORTHO05D004724 1.7e-15 87.0 147 78.2
CAN.G95.2 Capsicum annuum HOM05D004463 ORTHO05D004724 2.3e-15 86.7 137 78.1
TWI75G1243 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 2.3e-15 86.7 149 77.9
CANSAT11G2458 Cannabis sativa HOM05D004463 ORTHO05D004724 3.0e-15 86.3 145 80.0
Lalb_Chr23g0265191 Lupinus albus HOM05D004463 ORTHO05D004724 3.9e-15 85.9 144 81.2
Cpa.g.sc150.22 Carica papaya HOM05D004463 ORTHO05D004724 5.0e-15 85.5 142 80.3
RcHm_v2.0_Chr6g0267601 Rosa chinensis HOM05D004463 ORTHO05D004724 5.0e-15 85.5 144 77.1
Gohir.D02G220400 Gossypium hirsutum HOM05D004463 ORTHO05D004724 8.6e-15 84.7 148 75.7
Ca_15338_v3 Cicer arietinum L. HOM05D004463 ORTHO05D004724 3.3e-14 82.8 143 81.1
Ciclev10029089m.g Citrus clementina HOM05D004463 ORTHO05D004724 4.3e-14 82.4 145 77.9
Prupe.8G085500 Prunus persica HOM05D004463 ORTHO05D004724 2.8e-13 79.7 57 87.7
Sabra04G0108800 Salix brachista HOM05D004463 ORTHO05D004724 2.8e-13 79.7 133 75.2
TWI31G1301 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 4.7e-13 79.0 144 75.7
Hund00218 Selenicereus undatus HOM05D004463 ORTHO05D004724 8.0e-13 78.2 133 72.9
Psat5g004400 Pisum sativum HOM05D004463 ORTHO05D004724 3.1e-12 76.3 157 54.8
Psat5g004520 Pisum sativum HOM05D004463 ORTHO05D004724 1.2e-11 74.3 65 80.0
Hund26868 Selenicereus undatus HOM05D004463 ORTHO05D004724 2.6e-11 73.2 157 71.3
Eucgr.I01324 Eucalyptus grandis HOM05D004463 ORTHO05D004724 3.4e-11 72.8 140 75.7
TPR.G32219 Trifolium pratense HOM05D004463 ORTHO05D004724 7.5e-11 71.6 152 74.3
CDE02G2851 Ceratophyllum demersum HOM05D003292 ORTHO05D004237 1.3e-10 70.9 67 68.7
Lsat_1_v5_gn_4_67220 Lactuca sativa HOM05D039287 ORTHO05D004724 2.9e-10 69.7 223 54.3
Manes.15G189900 Manihot esculenta HOM05D004463 ORTHO05D004724 2.9e-10 69.7 132 77.3
Psat5g004560 Pisum sativum HOM05D004463 ORTHO05D004724 3.7e-10 69.3 165 45.5
CiPaw.13G045000 Carya illinoinensis HOM05D004463 ORTHO05D004724 4.9e-10 68.9 133 76.7
GSVIVG01024180001 Vitis vinifera HOM05D004463 ORTHO05D004724 4.9e-10 68.9 132 78.8
CiPaw.14G035900 Carya illinoinensis HOM05D004463 ORTHO05D004724 1.9e-09 67.0 134 76.9
Peaxi162Scf00538g00125 Petunia axillaris HOM05D004463 ORTHO05D004724 1.9e-09 67.0 99 51.5
Duzib132G0628 Durio zibethinus HOM05D004463 ORTHO05D004724 2.4e-09 66.6 139 74.8
Duzib052G0336 Durio zibethinus HOM05D004463 ORTHO05D004724 4.1e-09 65.9 137 77.4
Thecc.02G075900 Theobroma cacao HOM05D004463 ORTHO05D004724 5.4e-09 65.5 137 76.6
MBI19_g03564_MAGBIO Magnolia biondii HOM05D004463 ORTHO05D004724 1.7e-07 60.5 134 73.1
Sc25g0002840 Simmondsia chinensis HOM05D004463 ORTHO05D004724 1.7e-07 60.5 55 78.2
SGA_v2.0_scaffold32G13220 Striga asiatica HOM05D039287 ORTHO05D004724 2.3e-07 60.1 230 50.0
THA.LOC104807766 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 2.3e-07 60.1 143 73.4
Peaxi162Scf00684g00132 Petunia axillaris HOM05D004463 ORTHO05D004724 3.0e-07 59.7 59 66.1
Dinv39485 Davidia involucrata HOM05D004463 ORTHO05D004724 6.6e-07 58.5 40 65.0
Manes.17G001400 Manihot esculenta HOM05D004463 ORTHO05D004724 6.6e-07 58.5 132 72.0
CSS0016875 Camellia sinensis var. sinensis HOM05D004463 ORTHO05D004724 8.6e-07 58.2 135 74.1
Cc02_g16980 Coffea canephora HOM05D004463 ORTHO05D004724 1.9e-06 57.0 139 73.4
Gohir.D10G224732 Gossypium hirsutum HOM05D004463 ORTHO05D004724 2.5e-06 56.6 68 61.8
Dinv42004 Davidia involucrata HOM05D004463 ORTHO05D004724 3.3e-06 56.2 134 72.4
THA.LOC104809337 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 3.3e-06 56.2 74 67.6
Actinidia00571 Actinidia chinensis HOM05D004463 ORTHO05D004724 4.3e-06 55.8 133 65.4
EL10Ac1g00556 Beta vulgaris HOM05D004463 ORTHO05D004724 7.3e-06 55.1 182 61.0


User provided reference genes

Program Settings