Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.4e-65 252.7 120 100.0
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 7.7e-27 124.0 119 59.7
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 7.7e-19 97.4 116 46.6
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 6.8e-15 84.3 117 38.5
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.5e-14 83.2 107 45.8
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 2.0e-14 82.8 83 45.8
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 2.0e-14 82.8 117 37.6
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 4.8e-13 78.2 81 45.7
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 8.3e-13 77.4 36 83.3
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 8.3e-13 77.4 42 69.0
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 8.3e-13 77.4 47 66.0
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.1e-12 77.0 57 57.9
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 1.4e-12 76.6 59 55.9
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 1.4e-12 76.6 39 79.5
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 1.4e-12 76.6 39 79.5
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.8e-12 76.3 37 81.1
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 1.8e-12 76.3 62 56.5
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.8e-12 76.3 51 62.7
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 2.4e-12 75.9 67 50.7
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 2.4e-12 75.9 67 50.7
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 2.4e-12 75.9 70 50.0
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 3.1e-12 75.5 102 39.2
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 5.4e-12 74.7 56 57.1
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 7.0e-12 74.3 67 49.3
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.2e-11 73.6 106 37.7
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.2e-11 73.6 55 58.2
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 1.2e-11 73.6 32 84.4
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.2e-11 73.6 67 46.3
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.6e-11 73.2 54 61.1
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 1.6e-11 73.2 76 46.1
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.6e-11 73.2 32 81.2
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 1.6e-11 73.2 31 87.1
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 1.6e-11 73.2 36 75.0
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 1.6e-11 73.2 37 70.3
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 2.0e-11 72.8 56 53.6
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 2.0e-11 72.8 59 57.6
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 2.0e-11 72.8 37 67.6
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 2.0e-11 72.8 47 63.8
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.0e-11 72.8 96 38.5
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 2.7e-11 72.4 71 45.1
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 2.7e-11 72.4 62 50.0
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 3.5e-11 72.0 32 84.4
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 3.5e-11 72.0 32 84.4
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 3.5e-11 72.0 96 38.5
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 4.5e-11 71.6 38 71.1
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 4.5e-11 71.6 63 47.6
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 5.9e-11 71.2 79 44.3
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 5.9e-11 71.2 31 83.9
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 7.7e-11 70.9 48 60.4
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 7.7e-11 70.9 31 83.9
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 7.7e-11 70.9 61 50.8
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.0e-10 70.5 43 65.1
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 1.0e-10 70.5 36 69.4
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.0e-10 70.5 93 40.9
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 1.7e-10 69.7 30 86.7
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.3e-10 69.3 65 49.2
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 2.3e-10 69.3 37 67.6
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.3e-10 69.3 36 75.0
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 2.3e-10 69.3 56 53.6
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 2.3e-10 69.3 33 78.8
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 2.9e-10 68.9 48 64.6
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 3.8e-10 68.6 29 89.7
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 3.8e-10 68.6 38 68.4
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 3.8e-10 68.6 55 54.5
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 5.0e-10 68.2 48 54.2
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 5.0e-10 68.2 62 46.8
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 5.0e-10 68.2 33 75.8
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 8.6e-10 67.4 42 66.7
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 8.6e-10 67.4 37 70.3
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.1e-09 67.0 42 66.7
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.9e-09 66.2 104 37.5
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.5e-09 65.9 33 75.8
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 2.5e-09 65.9 31 77.4
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 2.5e-09 65.9 68 47.1
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 3.3e-09 65.5 32 75.0
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 3.3e-09 65.5 42 64.3
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 3.3e-09 65.5 78 44.9
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 4.2e-09 65.1 53 50.9
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 4.2e-09 65.1 33 75.8
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 4.2e-09 65.1 34 70.6
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 4.2e-09 65.1 68 47.1
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 4.2e-09 65.1 68 47.1
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.2e-09 65.1 52 51.9
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.2e-09 65.1 52 51.9
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 5.5e-09 64.7 37 64.9
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 5.5e-09 64.7 36 69.4
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 7.2e-09 64.3 36 66.7
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 7.2e-09 64.3 33 69.7
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 7.2e-09 64.3 52 51.9
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 9.5e-09 63.9 29 79.3
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 9.5e-09 63.9 29 79.3
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 9.5e-09 63.9 29 79.3
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.6e-08 63.2 72 41.7
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.6e-08 63.2 37 64.9
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 2.1e-08 62.8 46 56.5
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 2.1e-08 62.8 29 82.8
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.8e-08 62.4 32 75.0
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 4.7e-08 61.6 37 56.8
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 6.1e-08 61.2 31 71.0
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 8.0e-08 60.8 29 79.3
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.0e-07 60.5 38 57.9
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.3e-07 59.3 31 67.7
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 8.9e-07 57.4 28 71.4
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 1.5e-06 56.6 22 90.9


User provided reference genes

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