Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g29043 Nelumbo nucifera HOM05D001694 ORTHO05D000248 4.2e-40 167.5 82 100.0
Cc10_g07540 Coffea canephora HOM05D001694 ORTHO05D000248 6.2e-12 73.9 60 63.3
Medtr8g091310 Medicago truncatula HOM05D001694 ORTHO05D000248 1.8e-11 72.4 60 61.7
Cc00_g17010 Coffea canephora HOM05D001694 ORTHO05D000248 4.0e-11 71.2 70 52.9
Eucgr.F00489 Eucalyptus grandis HOM05D001694 ORTHO05D000248 4.0e-11 71.2 81 50.6
TAR625G0590 Trochodendron aralioides HOM05D001694 ORTHO05D000248 9.0e-11 70.1 73 54.8
CiPaw.03G139500 Carya illinoinensis HOM05D001694 ORTHO05D000248 1.5e-10 69.3 60 61.7
MBI05_g06569_MAGBIO Magnolia biondii HOM05D001694 ORTHO05D000248 1.5e-10 69.3 73 49.3
MBI05_g43273_MAGBIO Magnolia biondii HOM05D001694 ORTHO05D000248 1.5e-10 69.3 73 49.3
QL12p036057 Quercus lobata HOM05D001694 ORTHO05D000248 1.5e-10 69.3 60 61.7
MBI05_g14549_MAGBIO Magnolia biondii HOM05D001694 ORTHO05D000248 3.4e-10 68.2 73 49.3
Prupe.1G512300 Prunus persica HOM05D001694 ORTHO05D000248 4.5e-10 67.8 60 58.3
Nn1g05284 Nelumbo nucifera HOM05D001694 ORTHO05D000248 5.8e-10 67.4 118 39.8
Atru.chr13.1260 Acer truncatum HOM05D001694 ORTHO05D000248 7.6e-10 67.0 60 58.3
MD08G1178600 Malus domestica HOM05D001694 ORTHO05D000248 7.6e-10 67.0 60 58.3
QL12p036042 Quercus lobata HOM05D001694 ORTHO05D000248 1.0e-09 66.6 60 60.0
GSVIVG01002801001 Vitis vinifera HOM05D001694 ORTHO05D000248 1.0e-09 66.6 60 58.3
Prupe.6G181100 Prunus persica HOM05D001694 ORTHO05D000248 1.3e-09 66.2 60 58.3
HPP92_006312 Vanilla planifolia HOM05D001694 ORTHO05D000248 1.3e-09 66.2 69 44.9
arahy.Tifrunner.gnm1.ann1.0T4V2C Arachis hypogaea HOM05D001694 ORTHO05D000248 2.2e-09 65.5 62 51.6
arahy.Tifrunner.gnm1.ann1.7BE6GS Arachis hypogaea HOM05D001694 ORTHO05D000248 2.2e-09 65.5 113 34.5
arahy.Tifrunner.gnm1.ann1.8X0KIE Arachis hypogaea HOM05D001694 ORTHO05D000248 2.2e-09 65.5 62 51.6
Cpa.g.sc20.222 Carica papaya HOM05D001694 ORTHO05D000248 2.2e-09 65.5 59 59.3
Ca_17718_v3 Cicer arietinum L. HOM05D001694 ORTHO05D000248 2.2e-09 65.5 72 52.8
TAR381G1132 Trochodendron aralioides HOM05D001694 ORTHO05D000248 2.2e-09 65.5 60 56.7
Cfa002692 Carpinus fangiana HOM05D001694 ORTHO05D000248 2.9e-09 65.1 127 36.2
MD01G1025400 Malus domestica HOM05D001694 ORTHO05D000248 2.9e-09 65.1 60 60.0
Cfa015921 Carpinus fangiana HOM05D001694 ORTHO05D000248 3.8e-09 64.7 60 56.7
arahy.Tifrunner.gnm1.ann1.5RQ1EV Arachis hypogaea HOM05D001694 ORTHO05D000248 5.0e-09 64.3 61 63.9
Haze_00574 Corylus avellana HOM05D001694 ORTHO05D000248 5.0e-09 64.3 60 56.7
Dinv44748 Davidia involucrata HOM05D001694 ORTHO05D000248 5.0e-09 64.3 60 53.3
Gohir.A02G131900 Gossypium hirsutum HOM05D001694 ORTHO05D000248 5.0e-09 64.3 61 62.3
Hma1.2p1_0120F.1_g057120 Hydrangea macrophylla HOM05D001694 ORTHO05D000248 5.0e-09 64.3 60 53.3
Gohir.A02G131700 Gossypium hirsutum HOM05D001694 ORTHO05D000248 6.5e-09 63.9 61 60.7
Gohir.D03G043100 Gossypium hirsutum HOM05D001694 ORTHO05D000248 6.5e-09 63.9 61 60.7
Nn1g05285 Nelumbo nucifera HOM05D001694 ORTHO05D000248 6.5e-09 63.9 60 56.7
Sopen12g029620 Solanum pennellii HOM05D001694 ORTHO05D000248 6.5e-09 63.9 60 55.0
CSS0013376 Camellia sinensis var. sinensis HOM05D001694 ORTHO05D000248 8.4e-09 63.5 64 51.6
Manes.18G069900 Manihot esculenta HOM05D001694 ORTHO05D000248 8.4e-09 63.5 59 55.9
Solyc12g056960.2 Solanum lycopersicum HOM05D001694 ORTHO05D000248 8.4e-09 63.5 60 55.0
CSS0048246 Camellia sinensis var. sinensis HOM05D001694 ORTHO05D000248 1.1e-08 63.2 61 55.7
Lj6g0013549 Lotus japonicus HOM05D001694 ORTHO05D000248 1.1e-08 63.2 60 55.0
Phvul.002G261800 Phaseolus vulgaris HOM05D001694 ORTHO05D000248 1.1e-08 63.2 60 55.0
Haze_24965 Corylus avellana HOM05D001694 ORTHO05D000248 1.4e-08 62.8 127 35.4
Duzib264G0595 Durio zibethinus HOM05D001694 ORTHO05D000248 1.4e-08 62.8 61 60.7
FAN26G0713 Fragaria x ananassa HOM05D001694 ORTHO05D000248 1.4e-08 62.8 60 53.3
Glyma.05G180700 Glycine max HOM05D001694 ORTHO05D000248 1.4e-08 62.8 60 55.0
TPR.G2193 Trifolium pratense HOM05D001694 ORTHO05D000248 1.4e-08 62.8 60 56.7
Peaxi162Scf00160g01417 Petunia axillaris HOM05D001694 ORTHO05D000248 1.9e-08 62.4 60 55.0
Atru.chr2.3256 Acer truncatum HOM05D001694 ORTHO05D000248 2.5e-08 62.0 125 32.8
arahy.Tifrunner.gnm1.ann1.59SVGU Arachis hypogaea HOM05D001694 ORTHO05D000248 2.5e-08 62.0 61 62.3
RcHm_v2.0_Chr2g0115211 Rosa chinensis HOM05D001694 ORTHO05D000248 2.5e-08 62.0 60 56.7
GSVIVG01008995001 Vitis vinifera HOM05D001694 ORTHO05D000248 2.5e-08 62.0 60 51.7
CiPaw.06G021500 Carya illinoinensis HOM05D001694 ORTHO05D000248 3.2e-08 61.6 60 53.3
Ciclev10000913m.g Citrus clementina HOM05D001694 ORTHO05D000248 3.2e-08 61.6 60 53.3
Gohir.D03G043200 Gossypium hirsutum HOM05D001694 ORTHO05D000248 3.2e-08 61.6 59 61.0
Gorai.003G044000 Gossypium raimondii HOM05D001694 ORTHO05D000248 3.2e-08 61.6 61 59.0
QL06p050101 Quercus lobata HOM05D001694 ORTHO05D000248 3.2e-08 61.6 127 33.1
QL06p050129 Quercus lobata HOM05D001694 ORTHO05D000248 3.2e-08 61.6 127 33.1
Sc05g0007710 Simmondsia chinensis HOM05D001694 ORTHO05D000248 3.2e-08 61.6 75 46.7
VMungo0251G3660 Vigna mungo HOM05D001694 ORTHO05D000248 3.2e-08 61.6 60 55.0
Manes.18G069802 Manihot esculenta HOM05D001694 ORTHO05D000248 4.2e-08 61.2 59 54.2
RcHm_v2.0_Chr7g0239891 Rosa chinensis HOM05D001694 ORTHO05D000248 4.2e-08 61.2 60 51.7
PGSC0003DMG400008553 Solanum tuberosum HOM05D001694 ORTHO05D000248 4.2e-08 61.2 60 53.3
Gorai.003G044300 Gossypium raimondii HOM05D001694 ORTHO05D000248 5.5e-08 60.8 61 59.0
Lj4g0007993 Lotus japonicus HOM05D001694 ORTHO05D000248 5.5e-08 60.8 60 53.3
CiPaw.06G021800 Carya illinoinensis HOM05D001694 ORTHO05D000248 7.1e-08 60.5 60 53.3
Ciclev10025415m.g Citrus clementina HOM05D001694 ORTHO05D000248 7.1e-08 60.5 59 54.2
Potri.005G078500 Populus trichocarpa HOM05D001694 ORTHO05D000248 9.3e-08 60.1 59 59.3
Potri.005G167800 Populus trichocarpa HOM05D001694 ORTHO05D000248 9.3e-08 60.1 60 51.7
Rhsim06G0085000 Rhododendron simsii HOM05D001694 ORTHO05D000248 9.3e-08 60.1 60 51.7
FAN08G1288 Fragaria x ananassa HOM05D001694 ORTHO05D000248 1.2e-07 59.7 60 50.0
FAN13G1626 Fragaria x ananassa HOM05D001694 ORTHO05D000248 1.2e-07 59.7 60 50.0
Glyma.08G138300 Glycine max HOM05D001694 ORTHO05D000248 1.2e-07 59.7 60 51.7
Lj4C107T4 Lonicera japonica HOM05D001694 ORTHO05D000248 1.2e-07 59.7 59 52.5
CSS0014170 Camellia sinensis var. sinensis HOM05D001694 ORTHO05D000248 1.6e-07 59.3 64 46.9
CSS0048276 Camellia sinensis var. sinensis HOM05D001694 ORTHO05D000248 1.6e-07 59.3 61 52.5
CSS0048560 Camellia sinensis var. sinensis HOM05D001694 ORTHO05D000248 1.6e-07 59.3 61 54.1
Eucgr.F00488 Eucalyptus grandis HOM05D001694 ORTHO05D000248 1.6e-07 59.3 59 57.6
FvH4_1g21360 Fragaria vesca HOM05D001694 ORTHO05D000248 1.6e-07 59.3 60 51.7
FAN19G2822 Fragaria x ananassa HOM05D001694 ORTHO05D000248 1.6e-07 59.3 60 51.7
Gohir.D05G231400 Gossypium hirsutum HOM05D001694 ORTHO05D000248 1.6e-07 59.3 60 48.3
Manes.12G137500 Manihot esculenta HOM05D001694 ORTHO05D000248 1.6e-07 59.3 61 54.1
Os10g0370800 Oryza sativa ssp. japonica HOM05D001694 ORTHO05D000248 1.6e-07 59.3 60 55.0
Sabra05G0064500 Salix brachista HOM05D001694 ORTHO05D000248 1.6e-07 59.3 59 59.3
Sabra05G0126600 Salix brachista HOM05D001694 ORTHO05D000248 1.6e-07 59.3 60 51.7
Migut.O00463 Erythranthe guttata HOM05D001694 ORTHO05D000248 2.1e-07 58.9 60 53.3
Potri.007G089400 Populus trichocarpa HOM05D001694 ORTHO05D000248 2.1e-07 58.9 59 54.2
FAN23G2628 Fragaria x ananassa HOM05D001694 ORTHO05D000248 2.7e-07 58.5 60 51.7
Duzib093G0964 Durio zibethinus HOM05D001694 ORTHO05D000248 3.5e-07 58.2 60 46.7
Gohir.A05G228900 Gossypium hirsutum HOM05D001694 ORTHO05D000248 3.5e-07 58.2 60 46.7
Thecc.08G111200 Theobroma cacao HOM05D001694 ORTHO05D000248 3.5e-07 58.2 60 48.3
Thecc.01G105200 Theobroma cacao HOM05D001694 ORTHO05D000248 4.6e-07 57.8 61 57.4
DCAR_012729 Daucus carota HOM05D001694 ORTHO05D000248 6.1e-07 57.4 61 55.7
CSS0000558 Camellia sinensis var. sinensis HOM05D001694 ORTHO05D000248 7.9e-07 57.0 61 57.4
vmacro21231 Vaccinium macrocarpon HOM05D001694 ORTHO05D000248 7.9e-07 57.0 60 48.3
COL.COLO4_16451 Corchorus olitorius HOM05D001694 ORTHO05D000248 1.3e-06 56.2 60 46.7
Gorai.009G239600 Gossypium raimondii HOM05D001694 ORTHO05D000248 1.3e-06 56.2 60 46.7
COL.COLO4_16454 Corchorus olitorius HOM05D001694 ORTHO05D000248 1.8e-06 55.8 61 49.2
FvH4_5g37950 Fragaria vesca HOM05D001694 ORTHO05D000248 1.8e-06 55.8 60 50.0
FAN18G3022 Fragaria x ananassa HOM05D001694 ORTHO05D000248 1.8e-06 55.8 60 50.0
SalBow3G2740 Salvia bowleyana HOM05D001694 ORTHO05D000248 2.3e-06 55.5 60 48.3
GSVIVG01006369001 Vitis vinifera HOM05D001694 ORTHO05D000248 2.3e-06 55.5 60 50.0
Actinidia30752 Actinidia chinensis HOM05D001694 ORTHO05D000248 3.0e-06 55.1 60 48.3
AUR62038528 Chenopodium quinoa HOM05D001694 ORTHO05D000248 3.0e-06 55.1 60 51.7
Eucgr.F00487 Eucalyptus grandis HOM05D001694 ORTHO05D000248 3.0e-06 55.1 59 50.8
Psat7g052880 Pisum sativum HOM05D001694 ORTHO05D000248 3.0e-06 55.1 59 54.2
TWI56G0263 Tripterygium wilfordii HOM05D001694 ORTHO05D000248 3.0e-06 55.1 61 50.8
HPP92_006310 Vanilla planifolia HOM05D001694 ORTHO05D000248 3.0e-06 55.1 96 32.3
AUR62013376 Chenopodium quinoa HOM05D001694 ORTHO05D000248 3.9e-06 54.7 56 53.6
AUR62044253 Chenopodium quinoa HOM05D001694 ORTHO05D000248 5.1e-06 54.3 60 46.7
Dinv13039 Davidia involucrata HOM05D001694 ORTHO05D000248 5.1e-06 54.3 60 50.0
Glyma.14G170600 Glycine max HOM05D001694 ORTHO05D000248 5.1e-06 54.3 60 51.7
Lalb_Chr07g0185051 Lupinus albus HOM05D001694 ORTHO05D000248 5.1e-06 54.3 60 55.0
Thecc.08G111100 Theobroma cacao HOM05D001694 ORTHO05D000248 5.1e-06 54.3 60 46.7
TWI36G0854 Tripterygium wilfordii HOM05D001694 ORTHO05D000248 6.7e-06 53.9 61 49.2
Cpa.g.sc66.87 Carica papaya HOM05D001694 ORTHO05D000248 8.7e-06 53.5 60 50.0
HPP92_006295 Vanilla planifolia HOM05D001694 ORTHO05D000248 8.7e-06 53.5 60 46.7
HPP92_006297 Vanilla planifolia HOM05D001694 ORTHO05D000248 8.7e-06 53.5 60 46.7
HPP92_006314 Vanilla planifolia HOM05D001694 ORTHO05D000248 8.7e-06 53.5 60 46.7


User provided reference genes

Program Settings