Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 0.0e+00 1432.2 695 100.0
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 5.7e-215 751.5 701 58.1
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 5.1e-163 578.9 695 48.8
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.4e-152 544.3 709 45.1
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 4.0e-152 542.7 705 46.8
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.4e-149 534.3 712 46.5
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 8.7e-147 525.0 700 45.6
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 5.3e-144 515.8 705 44.3
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 2.4e-141 506.9 694 45.4
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 2.1e-140 503.8 731 42.3
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 3.0e-139 500.0 704 44.9
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 3.7e-137 493.0 665 45.7
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 2.4e-136 490.3 706 42.8
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 9.3e-133 478.4 707 42.7
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.9e-130 470.7 720 42.8
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 3.3e-130 469.9 701 41.7
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 3.3e-130 469.9 703 42.8
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 4.8e-129 466.1 696 42.5
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 6.3e-129 465.7 684 42.1
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 4.1e-128 463.0 696 42.4
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 3.4e-127 459.9 715 41.4
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 4.5e-127 459.5 700 42.7
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 2.9e-126 456.8 714 39.6
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 5.0e-126 456.1 687 42.9
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 2.5e-125 453.8 753 40.1
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 7.2e-125 452.2 708 40.3
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 9.3e-125 451.8 703 41.3
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.1e-124 450.7 700 42.7
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 2.3e-123 447.2 701 41.7
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 7.4e-122 442.2 710 40.7
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 7.4e-122 442.2 698 41.4
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 7.4e-122 442.2 594 44.4
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.3e-121 441.4 698 41.5
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 2.8e-121 440.3 737 41.2
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 1.4e-120 438.0 749 39.8
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 1.8e-120 437.6 704 40.5
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 6.9e-120 435.6 719 41.4
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 9.0e-120 435.3 705 40.6
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 1.5e-119 434.5 697 40.0
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 3.4e-119 433.3 525 48.6
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 2.9e-118 430.3 713 40.5
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 1.4e-117 427.9 718 39.6
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 3.2e-117 426.8 645 43.3
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 3.6e-116 423.3 700 40.1
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 1.5e-114 417.9 564 44.5
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 2.5e-114 417.2 523 45.1
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 2.5e-114 417.2 728 39.8
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.7e-113 414.5 688 40.4
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 3.4e-111 406.8 715 39.4
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 2.3e-107 394.0 702 37.7
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 6.7e-107 392.5 544 43.8
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.1e-106 391.7 698 38.4
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 7.4e-106 389.0 593 42.7
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 1.6e-103 381.3 505 43.6
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 5.9e-103 379.4 699 37.2
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 2.2e-102 377.5 719 37.4
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 2.9e-102 377.1 706 36.5
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 1.1e-101 375.2 697 37.2
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 4.8e-97 359.8 693 37.8
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 1.6e-95 354.8 704 37.6
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 2.7e-95 354.0 706 35.8
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.9e-93 347.8 580 40.0
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 2.1e-92 344.4 684 34.5
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 3.6e-92 343.6 695 34.2
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.4e-91 341.7 682 35.8
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 6.3e-89 332.8 702 33.6
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 1.2e-87 328.6 367 54.5
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 2.7e-87 327.4 412 47.1
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 3.5e-87 327.0 493 41.0
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.2e-86 324.3 491 42.4
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 3.8e-86 323.6 697 35.9
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 1.0e-83 315.5 684 34.1
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 3.0e-83 313.9 721 33.4
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 4.0e-83 313.5 679 34.0
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 1.3e-81 308.5 694 33.4
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 1.3e-81 308.5 680 33.5
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 2.7e-79 300.8 533 38.6
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 2.7e-79 300.8 782 33.1
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 3.5e-79 300.4 344 50.6
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 1.7e-73 281.6 536 36.6
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 3.7e-73 280.4 536 36.6
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 4.9e-73 280.0 564 34.6
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 4.9e-73 280.0 406 41.1
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 5.9e-71 273.1 533 35.6
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 7.8e-71 272.7 319 46.7
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 3.1e-67 260.8 357 43.7
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 7.8e-63 246.1 382 38.0
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 3.6e-60 237.3 308 44.8
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 6.2e-60 236.5 359 44.3
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 1.1e-59 235.7 445 36.2
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 2.3e-59 234.6 375 38.7
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.4e-58 230.7 376 39.6
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 4.3e-53 213.8 257 44.4
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 1.5e-50 205.3 377 38.5
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 1.3e-49 202.2 356 39.6
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.3e-46 192.2 256 44.1
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.0e-46 191.0 310 40.0
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 6.6e-46 189.9 207 52.2
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.1e-43 182.6 332 37.3
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 1.2e-42 179.1 262 40.8
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 5.4e-40 170.2 374 33.2
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 4.6e-39 167.2 158 53.8
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.5e-37 161.4 292 40.4
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.5e-34 152.1 227 40.5
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 4.2e-32 144.1 286 34.3
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.1e-31 141.7 440 25.9
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.9e-29 135.2 148 53.4
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 5.3e-27 127.1 244 36.9
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.2e-24 117.9 139 46.8
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 1.6e-15 89.0 167 37.7
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.0e-14 86.3 142 39.4
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 6.9e-11 73.6 111 39.6
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 5.9e-10 70.5 120 35.0
TAR381G0879 Trochodendron aralioides HOM05D006715 ORTHO05D008345 5.9e-10 70.5 175 30.9
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 1.8e-06 58.9 47 57.4
CBR_g16883 Chara braunii HOM05D004492 ORTHO05D001303 1.8e-06 58.9 137 27.0


User provided reference genes

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