Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.0e-99 366.7 184 100.0
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.3e-75 285.8 179 79.9
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 5.1e-70 268.1 179 74.3
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 2.4e-67 259.2 178 74.7
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 5.2e-67 258.1 176 73.9
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 4.4e-66 255.0 184 72.8
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 5.8e-66 254.6 178 69.1
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 5.8e-66 254.6 178 69.1
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 7.6e-66 254.2 175 73.1
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 9.9e-66 253.8 178 69.1
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 2.2e-65 252.7 184 72.3
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 2.2e-65 252.7 189 69.3
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 3.8e-65 251.9 172 74.4
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 1.4e-64 250.0 176 69.9
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 3.2e-64 248.8 184 68.5
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 7.1e-64 247.7 171 73.1
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 7.1e-64 247.7 171 73.1
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 7.1e-64 247.7 171 73.1
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 1.2e-63 246.9 179 68.7
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 3.5e-63 245.4 175 70.3
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 6.0e-63 244.6 177 68.9
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.0e-62 243.8 170 70.6
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.0e-62 243.8 179 68.7
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 1.7e-62 243.0 179 67.6
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 1.7e-62 243.0 175 70.3
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.0e-62 242.3 193 67.4
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 6.6e-62 241.1 182 67.6
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 6.6e-62 241.1 185 66.5
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 6.6e-62 241.1 185 66.5
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 6.6e-62 241.1 185 66.5
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 8.7e-62 240.7 180 66.1
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 8.7e-62 240.7 180 67.8
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 8.7e-62 240.7 182 67.6
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 1.1e-61 240.4 175 69.7
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 1.5e-61 240.0 176 67.6
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 1.9e-61 239.6 174 69.0
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 1.9e-61 239.6 173 69.9
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.9e-61 239.6 182 65.9
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 2.5e-61 239.2 172 69.8
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 2.5e-61 239.2 178 69.1
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 3.3e-61 238.8 185 64.9
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 3.3e-61 238.8 184 64.1
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 3.3e-61 238.8 176 65.9
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 4.3e-61 238.4 176 67.6
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 4.3e-61 238.4 176 68.8
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 4.3e-61 238.4 166 72.9
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 5.6e-61 238.0 182 67.0
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 5.6e-61 238.0 182 67.0
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 5.6e-61 238.0 180 65.6
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 9.6e-61 237.3 193 65.3
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 9.6e-61 237.3 180 70.0
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.3e-60 236.9 178 65.7
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.1e-60 236.1 182 66.5
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 2.8e-60 235.7 179 67.6
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.8e-60 235.7 182 66.5
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 3.6e-60 235.3 179 66.5
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 6.2e-60 234.6 177 66.7
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 8.1e-60 234.2 178 66.3
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.1e-59 233.8 181 63.5
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 1.8e-59 233.0 180 67.8
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 1.8e-59 233.0 182 64.8
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 6.9e-59 231.1 177 66.1
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 4.4e-58 228.4 176 67.0
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 9.9e-58 227.3 182 62.1
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 9.9e-58 227.3 178 66.9
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 9.9e-58 227.3 180 63.9
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.7e-57 226.5 180 63.9
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 2.9e-57 225.7 183 61.2
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.4e-56 223.4 184 60.3
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.6e-55 219.9 170 63.5
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 1.6e-55 219.9 177 65.5
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 1.6e-55 219.9 179 61.5
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 1.6e-55 219.9 169 62.7
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 2.7e-55 219.2 181 62.4
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 3.5e-55 218.8 193 59.6
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.5e-55 218.8 184 60.9
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.5e-55 218.8 184 60.9
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 1.7e-54 216.5 172 64.0
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 3.0e-54 215.7 152 72.4
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 6.6e-54 214.5 178 60.1
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 8.7e-54 214.2 151 69.5
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 7.3e-53 211.1 189 59.8
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 1.3e-52 210.3 141 70.9
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 4.8e-52 208.4 193 57.0
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 6.2e-52 208.0 186 59.1
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 6.2e-52 208.0 186 59.1
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 6.2e-52 208.0 186 59.1
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 6.2e-52 208.0 186 59.1
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.1e-51 207.2 180 65.0
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.1e-51 207.2 180 60.0
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 1.8e-51 206.5 183 59.0
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 1.8e-51 206.5 183 59.0
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 5.3e-51 204.9 187 57.2
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 5.3e-51 204.9 189 57.1
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 5.3e-51 204.9 189 57.1
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 2.6e-50 202.6 181 59.1
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 3.4e-50 202.2 188 57.4
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.4e-50 202.2 178 59.0
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 2.2e-49 199.5 192 55.7
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 3.2e-48 195.7 156 61.5
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.3e-41 173.7 170 50.6
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 5.5e-40 168.3 173 54.3
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 9.6e-37 157.5 170 44.1
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.3e-36 157.1 175 44.6
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 3.7e-36 155.6 172 44.8
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 2.4e-35 152.9 104 70.2
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 6.9e-35 151.4 141 54.6
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 4.5e-34 148.7 104 68.3
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 8.7e-30 134.4 94 68.1
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.2e-26 124.0 115 50.4
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.9e-24 116.7 61 95.1
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 1.4e-16 90.5 82 56.1
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 3.2e-16 89.4 130 40.0
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 3.6e-07 59.3 41 70.7
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 4.7e-07 58.9 46 58.7


User provided reference genes

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