Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 2.4e-84 315.5 159 100.0
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 1.0e-58 230.3 158 74.7
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 1.9e-57 226.1 160 75.0
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 1.6e-56 223.0 160 71.9
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 2.8e-56 222.2 158 70.9
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 3.6e-56 221.9 165 71.5
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 6.1e-56 221.1 160 71.2
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.0e-55 220.3 164 70.7
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 1.4e-55 219.9 160 72.5
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.8e-55 219.5 160 71.2
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.8e-55 219.5 160 71.2
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 1.2e-54 216.9 159 71.7
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 1.5e-54 216.5 159 72.3
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 2.0e-54 216.1 162 69.1
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 2.6e-54 215.7 158 70.9
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 7.5e-54 214.2 159 72.3
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 2.2e-53 212.6 169 66.3
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 2.9e-53 212.2 149 73.8
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 6.3e-53 211.1 159 69.2
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 1.1e-52 210.3 170 67.1
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 1.1e-52 210.3 162 71.0
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 1.8e-52 209.5 161 70.8
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 5.4e-52 208.0 162 67.9
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 1.2e-51 206.8 159 67.3
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 1.6e-51 206.5 154 72.1
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 2.0e-51 206.1 160 68.1
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 2.0e-51 206.1 159 68.6
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 3.5e-51 205.3 160 66.9
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 4.6e-51 204.9 164 65.2
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 7.8e-51 204.1 166 67.5
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 1.0e-50 203.8 159 67.9
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 3.9e-50 201.8 175 64.0
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 3.9e-50 201.8 159 66.0
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 5.0e-50 201.4 151 70.2
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 8.6e-50 200.7 170 64.7
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 8.6e-50 200.7 170 64.7
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 8.6e-50 200.7 162 67.9
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 1.1e-49 200.3 152 72.4
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 4.3e-49 198.4 162 65.4
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 9.5e-49 197.2 176 61.9
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 2.1e-48 196.1 162 69.1
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 2.1e-48 196.1 162 67.9
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 2.1e-48 196.1 167 64.1
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 3.6e-48 195.3 155 67.7
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 3.6e-48 195.3 160 65.0
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 4.7e-48 194.9 165 64.8
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 1.8e-47 193.0 161 62.7
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 2.3e-47 192.6 160 67.5
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 6.8e-47 191.0 162 66.0
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 6.8e-47 191.0 118 79.7
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 8.9e-47 190.7 94 94.7
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 1.2e-46 190.3 96 93.8
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.5e-46 189.9 172 62.2
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 2.6e-46 189.1 162 65.4
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 2.6e-46 189.1 162 63.0
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 2.6e-46 189.1 162 63.0
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 3.4e-46 188.7 94 91.5
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 7.5e-46 187.6 163 62.6
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 7.5e-46 187.6 162 66.0
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 9.8e-46 187.2 162 63.0
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 1.3e-45 186.8 157 64.3
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.7e-45 186.4 159 61.6
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 1.7e-45 186.4 157 65.0
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 2.2e-45 186.0 173 61.8
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 2.2e-45 186.0 161 64.0
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 2.9e-45 185.7 163 64.4
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 3.7e-45 185.3 100 88.0
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 4.9e-45 184.9 123 74.0
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 8.3e-45 184.1 156 67.9
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 92 92.4
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 166 60.8
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 1.4e-44 183.3 157 64.3
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 1.4e-44 183.3 158 61.4
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 2.4e-44 182.6 153 62.7
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 7.0e-44 181.0 179 60.9
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.2e-43 180.3 164 62.2
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 2.7e-43 179.1 173 60.1
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 2.7e-43 179.1 163 61.3
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 4.6e-43 178.3 162 59.9
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 2.5e-41 172.6 86 91.9
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 5.6e-41 171.4 153 65.4
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 1.2e-40 170.2 150 62.0
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 2.1e-40 169.5 154 60.4
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 1.8e-39 166.4 118 70.3
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.8e-39 166.4 86 89.5
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 6.8e-39 164.5 185 53.5
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 1.5e-38 163.3 181 54.1
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 3.4e-38 162.2 83 89.2
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 5.8e-38 161.4 160 56.2
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 3.7e-37 158.7 81 91.4
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 1.2e-35 153.7 160 54.4
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 2.1e-35 152.9 80 87.5
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 6.0e-35 151.4 87 78.2
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 6.0e-35 151.4 82 84.1
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 6.6e-34 147.9 75 89.3
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 2.5e-33 146.0 82 81.7
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 2.1e-32 142.9 79 81.0
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 4.7e-32 141.7 137 63.5
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 1.4e-31 140.2 113 63.7
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 1.8e-31 139.8 68 92.6
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 6.4e-29 131.3 110 60.0
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 2.4e-23 112.8 115 57.4
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 3.2e-20 102.4 118 57.6


User provided reference genes

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